Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20troglodytes_20[refseq_20GCF_5F000001515.7_202016-05-03] 44,449 sequences; 3,231,170,666 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1283 113 3e-20 seq1056 109 4e-19 seq793 100 2e-16 seq1113 98.7 6e-16 seq183 87.8 1e-12 seq148 86.0 4e-12 seq1 84.2 1e-11 >seq1283 Length=83181570 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| ||||| || | || || ||||| ||||||||||| || Sbjct 38692117 CCACCTCTCAGACGCAGGACCAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 38692058 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| | || |||| |||||||||||| || ||||||| |||||||||| || Sbjct 38692057 AGAGTACGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 38691998 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||| || ||||| ||| | || | || | || | | || || Sbjct 38691997 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 38691938 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| |||||||| || |||||||| ||||||||||| Sbjct 38691937 TCAAGGGTGATGGTCTTGCCGGTAAGGGTTTTCACGAAGATCTGCAT 38691891 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| |||||||| | || |||||||| ||||||||||| || Sbjct 38692573 CCACCCCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAA 38692514 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| |||||||||||| || ||||||| |||||||||| || Sbjct 38692513 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 38692454 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || || || || ||||| ||| | || | || | || | | || || Sbjct 38692453 ATGCCTTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 38692394 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| |||||||| || || ||||| ||||||||||| Sbjct 38692393 TCCAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 38692347 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| |||||||| | || || ||||| ||||||||||| || Sbjct 38692345 CCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 38692286 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| |||||||||||| || ||||||| |||||||||| || Sbjct 38692285 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 38692226 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || || || || ||||| ||| | || | || | || | | || || Sbjct 38692225 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACT 38692166 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| ||||| || || || ||||| ||||||||||| Sbjct 38692165 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 38692119 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| ||||| || | || |||||||| ||||||||||| || Sbjct 34932436 CCACCTCTCAGACGCAGGACCAGATGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAA 34932495 Query 34223 AG-CTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || ||| ||| | || |||| |||||||||||| || ||||||| ||||||||| ||||| Sbjct 34932496 AGACTG-CGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTC-ACGGG 34932553 Query 34282 CA-CGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | || || || || || || ||| | || | || | | | | || | Sbjct 34932554 GATTGCCTTCTTTATCTTGGATTTTGGCCTTGACATTTTCGATAGTGGCACTGGGCTCCA 34932613 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || | |||||| | |||||||| || |||||||| ||||||||||| Sbjct 34932614 CTTCAAGGGTGATGATCTTGCCGGTAAGGGTTTTCACGAAGATCTGCAT 34932662 Score = 95.1 bits (104), Expect = 8e-15 Identities = 158/227 (70%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| |||||||| | || || ||||| ||||||||||| || Sbjct 34932209 CCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 34932268 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | | || |||| |||||||||||| || ||||||| |||| | | | ||| Sbjct 34932269 AGAGTACCGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCCGAT-GGGGGGG 34932327 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || || || || ||||| ||| | || | || | || | | || || Sbjct 34932328 ATGCCTTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACT 34932387 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| |||||||| || || ||||| ||||||||||| Sbjct 34932388 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 34932434 >seq1056 Length=137163284 Score = 109 bits (120), Expect = 4e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| | ||| |||||||| ||||||||||| ||||| || | || Sbjct 128407849 AGCACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 128407908 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| |||||| || || || || | || ||||||||| || | || |||||||| Sbjct 128407909 TCCAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCT 128407968 Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||| |||||||| | | | || | || | | ||||| || | |||||||| Sbjct 128407969 TGGATC-TTTGCTTTGACGTTCTCGATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGT 128408027 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 |||||| ||||| || ||||| |||||||||||| Sbjct 128408028 TTTGCCAGTGAGTGTCTTCACGAAGATCTGCATC 128408061 Score = 100 bits (110), Expect = 2e-16 Identities = 154/215 (72%), Gaps = 5/215 (2%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGT-ACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236 ||||||||||| | || ||| ||||||| ||||||||||| ||||| || | || Sbjct 128406256 AGCACCAGGTGCAGGGTGACT--CTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 128406313 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296 |||| |||||| || || || || | || ||||||||| || | || |||||||| Sbjct 128406314 TTCCAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTC 128406373 Query 34297 GGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355 ||| |||||||| | | | || | || | | ||||| || | ||||||| Sbjct 128406374 TTGGATC-TTTGCTTTGACGTTCTCGATGGTGTCACTGGGCTCGACCTCAAGGGTGATGG 128406432 Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 | ||||| ||||| || ||||||||||| |||||| Sbjct 128406433 TCTTGCCAGTGAGTGTCTTCACAAAGATTTGCATC 128406467 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| | ||| |||||||| ||||||||||| ||||| ||| | || Sbjct 128406711 AGCACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAGTCAGACAGGGTACGACCATCT 128406770 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| ||| || || || || || | || ||||||||| || | || ||||||||| Sbjct 128406771 TCCAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGGATGCCCTCCTTGTCT 128406830 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 |||||| ||| | || | || | || | | || || || | |||||||| Sbjct 128406831 TGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTC 128406890 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || || || || || ||||| |||||||||||| Sbjct 128406891 TTACCAGTCAGGGTCTTCACGAAGATCTGCATC 128406923 Score = 100 bits (110), Expect = 2e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| | ||| |||||||| ||||||||||| ||||| || | || Sbjct 128406939 AGCACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 128406998 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| |||||| || || || || | || ||||||||| || | || |||||||| Sbjct 128406999 TCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCT 128407058 Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||| |||||||| | | | || | || | | ||||| || | |||||||| Sbjct 128407059 TGGATC-TTTGCTTTGACGTTCTCGATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGT 128407117 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 ||||| ||||| || ||||| ||||| |||||| Sbjct 128407118 CTTGCCAGTGAGTGTCTTCACGAAGATTTGCATC 128407151 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| || || |||||||| ||||||||||| ||||| ||| | || Sbjct 128406483 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTACGACCATCT 128406542 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| ||| || || || || || | || ||||||||| || | || |||||||| Sbjct 128406543 TCCAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCT 128406602 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 |||||| ||| | || | || | || | | || || || | |||||||| Sbjct 128406603 TGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTC 128406662 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || || || || || ||||| |||||||||||| Sbjct 128406663 TTACCAGTCAGGGTCTTCACGAAGATCTGCATC 128406695 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236 ||| |||| ||| | ||| |||||||| ||||||||||| ||||| || | || Sbjct 128405804 CAGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATC 128405863 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296 |||| ||| || || || || || | || ||||||||| || | || |||||||| Sbjct 128405864 TTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTC 128405923 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 |||||| ||| | || | || | || ||| || || || | |||||||| Sbjct 128405924 TTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTCGGCTCCACCTCGAGAGTGATGGT 128405983 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || || || || || ||||| |||||||||||| Sbjct 128405984 CTTACCAGTCAGGGTCTTCACGAAGATCTGCATC 128406017 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| | || |||||||| ||||||||||| ||||| || | || Sbjct 128408077 AGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 128408136 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| ||| || || || || || |||| ||||||||| || | || ||||| || Sbjct 128408137 TCCAGCTGTTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCT 128408196 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 |||||| ||| | || | || | || | | || || || | |||||||| Sbjct 128408197 TGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTC 128408256 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || ||||| ||||| ||||||||||| Sbjct 128408257 TTACCAGTCAGAGTCTTCACGAAGATCTGCAT 128408288 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| || || |||||||| ||||||||||| ||||| ||| | || Sbjct 128407167 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTACGACCATCT 128407226 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| ||| || || || || || | || |||||| || || | || ||||| || Sbjct 128407227 TCCAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCAGGAGGAATGCCTTCCTTATCT 128407286 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 |||||| ||| | || | || | || | | || || || | |||||||| Sbjct 128407287 TGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTC 128407346 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || || || || || ||||| |||||||||||| Sbjct 128407347 TTACCAGTCAGGGTCTTCACGAAGATCTGCATC 128407379 >seq793 Length=147911612 Score = 100 bits (110), Expect = 2e-16 Identities = 159/231 (69%), Gaps = 18/231 (8%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | |||||||||||| | ||| |||||||| ||||||||||| || Sbjct 125654446 CCACCTCGCAGGCGCAGCACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCTGAG 125654387 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| ||| ||||| || | || || ||||||||||| || Sbjct 125654386 AGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAGTATCAGACGCTGCTGGTCAGGTGGG 125654327 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| || ||||| | | | ||| |||| Sbjct 125654326 ATGCCCTCCTTGTC--CTGAATTTTGGCGTTGCTGGGC----------------TCGATC 125654285 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCT 34393 || | |||||||| ||||| ||||| || |||||||||||||||||| || Sbjct 125654284 TCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACAAAGATCTGCATCTCT 125654234 >seq1113 Length=91965084 Score = 98.7 bits (108), Expect = 6e-16 Identities = 163/233 (70%), Gaps = 7/233 (3%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||||||||||| || || |||||||| ||||||||| | || Sbjct 42394512 CCACCTCGCAGGCGCAGCACCAGGTTTAGGGTGGACTCTTTCTGGATGTTGTAGCCTGAG 42394453 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || | || | | |||| | || || || || || || ||||||||||| || Sbjct 42394452 AG---AGTGTGGCCATCCAGCCATTTCCCAGCAAATATCAGACGCTGCTGGTCAGGTGGG 42394396 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTA--TCGAATCGGTCGATTCGA 34340 | | ||||||||| || ||||| ||| || ||| | | ||||| | | || Sbjct 42394395 ATACCCTCCTTGTC--CTGAATTTTGGTTTTGACATTCTAAATGGTGTCGGTGGGCTTGA 42394338 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCT 34393 | || | |||||||| ||||| ||||| || |||||||||||||||||| || Sbjct 42394337 CCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATCTCT 42394285 Score = 86.0 bits (94), Expect = 4e-12 Identities = 138/196 (70%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 |||||||| ||||| ||||| || || |||| | || |||||||| ||| | || Sbjct 5116734 TCTTTCTGGATGTTATAGTCTGAAAGAGTACGGCCATCCTCCAACTGTTTGTTCACAAAT 5116675 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATC 34317 || || |||||||||| || | || |||||||||| ||||| ||||| | || Sbjct 5116674 ATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCGTGGATCTTG-GCTTTGACATT 5116616 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | | || | | | ||| || | |||||||||||||| ||||| || || || Sbjct 5116615 TTCACTGGTGTCACTTGGCTGGACCTCAAGGGTGATGGTTTTGCCTGTGAGGGTCTTTAC 5116556 Query 34378 AAAGATCTGCATCGCT 34393 | ||||||||||| || Sbjct 5116555 AGAGATCTGCATCTCT 5116540 >seq183 Length=202621043 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/224 (70%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 34171 CAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACG 34230 ||| | |||||||||||| | || |||||| | |||||| |||| || || || Sbjct 28070181 CAGGCGCAGCACCAGGTGCAGGGTGGACTCTTTCCGGATGTTGCAGTCTGAGAGAGTTCG 28070122 Query 34231 GTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTC 34290 | | || |||| ||| ||||| || | || || |||||||||| || | | ||| Sbjct 28070121 GCCATCCTCCAGCTGTTTGCCAGCAAGTATCAGATGCTGCTGGTCAGGTGGGATAC-CTC 28070063 Query 34291 CTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCG 34349 |||||| || ||| ||||| | || | || | || | | | |||||| | | Sbjct 28070062 CTTGTCTTGAAT-TTTGGCTTTGACATTCTCAATGGTGTCACTTGGCTTGACGTCAAGAG 28070004 Query 34350 TGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCT 34393 ||||||| ||||| ||||| || ||||||||||||||| || || Sbjct 28070003 TGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCGTCTCT 28069960 >seq148 Length=133216015 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| |||||||| | || |||||||| ||||| ||||| || Sbjct 25986995 CCACCTCTCAGACACAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTATAGTCAGAA 25987054 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | ||||| || |||| ||||||| |||| || ||||||| ||||||||| || Sbjct 25987055 TGAGTGCGGTCATCTTCCACCTGCTTGACTGCAAAGATGAGCCTCTGCTGGTCCGGGGTA 25987114 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||| || ||||| ||| | || || | || | | ||| || Sbjct 25987115 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTTGATGGTGTCCCTGGGTTCCACT 25987174 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | | ||||| |||| ||| || || ||||| ||||||||||| Sbjct 25987175 TCAAGGGCAATGGTCTTGCTGGTAAGGGTCTTCACGAAGATCTGCAT 25987221 Score = 82.4 bits (90), Expect = 5e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236 ||| |||||||| | || |||||||| ||||||||||| || || ||| | || Sbjct 25986770 CAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATC 25986829 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCG 34276 |||| |||||||||||| || ||||||| |||||||||| Sbjct 25986830 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCG 25986869 >seq1 Length=228573443 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 |||||||| ||||||||||| || || | | | || || | |||| ||||||| || Sbjct 196892023 TCTTTCTGGATGTTGTAGTCAGAAAGAGTGCAGCCATCTTCTAGCTGCATGCCTGCAAAG 196892082 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||||| |||||||||| | | | || ||||| || || || ||| | || Sbjct 196892083 ATGAGCCTCTGCTGGTCGGGGAGGATGCCTTCCTTATCCTGGATATTGGCCTTCACATTT 196892142 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | | || || || | |||||||| ||||| || || || ||||| Sbjct 196892143 TCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACG 196892202 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 196892203 AAGATCTGCAT 196892213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322896984729440