Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20troglodytes_20[refseq_20GCF_5F000001515.7_202016-05-03] 44,449 sequences; 3,231,170,666 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1588 417 1e-111 seq1481 417 1e-111 seq1 163 4e-35 seq106 114 2e-20 seq1024 111 2e-19 seq793 102 1e-16 seq1056 98.7 1e-15 seq1345 93.3 5e-14 >seq1588 Length=553333 Score = 417 bits (462), Expect = 1e-111 Identities = 662/941 (70%), Gaps = 26/941 (3%) Strand=Plus/Minus Query 33235 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 33291 |||| |||||| ||| ||| | |||| ||| |||| | || |||| |||||||| Sbjct 230606 TTTAGAAGTCAGCATTTAAGGTAAAAGAATTCTCTTTTGGACTTGACACCACTCCCATCC 230547 Query 33292 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33351 | || || || || || | | || || || ||||| |||| | ||| ||||| | Sbjct 230546 TCTGATACTCGCCTACTCCCCTCTCAAAGAAGTTAGTCTTTC-----AGTGAAATATTCT 230492 Query 33352 CCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCA 33411 || | || ||||| || | || | ||| || |||| |||| ||| || | Sbjct 230491 CCGTAAAGTCAAATGGGCTCTCTACTCCGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 230432 Query 33412 ATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 33471 ||| ||||| || || || || ||| ||||| | |||||||| || ||||| | Sbjct 230431 GTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 230372 Query 33472 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAA 33531 | || || | ||| | || || ||||||||||| || || ||||| | || || Sbjct 230371 TCACAGGCAAGGCCTCGGTGAGGAATTCTTGTTCTATCTGAACAGCATTGATAATTATTT 230312 Query 33532 ATCTAACGGTTTCTTCACTCGGTGGAT---GTAATAAATGTTTAAACATCAAACATGCGA 33588 ||| || ||||| | | || ||| | ||| | ||||| |||||||| || || | Sbjct 230311 CTCTCAC--TTTCTCCTC-CGATGGTTTGTGTACCAGGTGTTTGAACATCAAGCAAGCAA 230255 Query 33589 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCA 33648 |||| ||||| | |||||| ||||| ||||| | ||| || ||||||||||| || |||| Sbjct 230254 AATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCA 230195 Query 33649 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTT 33708 | | || || || || ||||| ||||| || || || || || ||||||||||| |||| Sbjct 230194 TCGGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTT 230135 Query 33709 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACT 33765 |||||||||| ||||| | || | || ||||| | | | |||| ||||| Sbjct 230134 CTACTGCAGCGAAGGCTACAACACGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGC 230075 Query 33766 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33825 |||||||| |||||||| || ||||||||||||||| | |||||||| |||||| Sbjct 230074 ACAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTT-CAATGGCATTGAAGAGAA 230016 Query 33826 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33885 | | ||||| || |||||| | ||||| || || | |||||||||||||| |||| Sbjct 230015 ATTCCTTTTCTTTGGGATCTTTGATGTAAGTGTCAATAAGGAGACTATACATTTCAGAAT 229956 Query 33886 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 33945 | |||||||| ||||| || || || || |||||||| | || || |||||||| ||| Sbjct 229955 GTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTA 229896 Query 33946 CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACG 34005 | | |||||| || | ||||||||||| ||||| |||||||| |||||||| || Sbjct 229895 TTTGGCTAAATCGCTCCACCAAATTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAA 229836 Query 34006 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG---- 34061 ||| ||||| |||||||||| | || || || || | ||||| || || Sbjct 229835 CCAGAACATGGGATATAAAATATCTCTCCTC-GGGCTTCGGGGATTCC---CAGTGCCGA 229780 Query 34062 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 34121 || || || || | ||||| || || ||||| || || ||||| ||||| |||||| Sbjct 229779 ATGTCCTTGGACAGGTCCACCTCCTCGGTGGTCCAGAAGGAAGCCTCCGCCTTCTTATAC 229720 Query 34122 ATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162 || | |||||| ||||| || | || ||||| || ||||| Sbjct 229719 ATCTGCCAGATATCATGGTACTCGACGGGGAAGATGACAAA 229679 >seq1481 Length=155549662 Score = 417 bits (462), Expect = 1e-111 Identities = 662/941 (70%), Gaps = 26/941 (3%) Strand=Plus/Plus Query 33235 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 33291 |||| |||||| ||| ||| | |||| ||| |||| | || |||| |||||||| Sbjct 44508327 TTTAGAAGTCAGCATTTAAGGTAAAAGAATTCTCTTTTGGACTTGACACCACTCCCATCC 44508386 Query 33292 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33351 | || || || || || | | || || || ||||| |||| | ||| ||||| | Sbjct 44508387 TCTGATACTCGCCTACTCCCCTCTCAAAGAAGTTAGTCTTTC-----AGTGAAATATTCT 44508441 Query 33352 CCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCA 33411 || | || ||||| || | || | ||| || |||| |||| ||| || | Sbjct 44508442 CCGTAAAGTCAAATGGGCTCTCTACTCCGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 44508501 Query 33412 ATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 33471 ||| ||||| || || || || ||| ||||| | |||||||| || ||||| | Sbjct 44508502 GTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 44508561 Query 33472 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAA 33531 | || || | ||| | || || ||||||||||| || || ||||| | || || Sbjct 44508562 TCACAGGCAAGGCCTCGGTGAGGAATTCTTGTTCTATCTGAACAGCATTGATAATTATTT 44508621 Query 33532 ATCTAACGGTTTCTTCACTCGGTGGAT---GTAATAAATGTTTAAACATCAAACATGCGA 33588 ||| || ||||| | | || ||| | ||| | ||||| |||||||| || || | Sbjct 44508622 CTCTCAC--TTTCTCCTC-CGATGGTTTGTGTACCAGGTGTTTGAACATCAAGCAAGCAA 44508678 Query 33589 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCA 33648 |||| ||||| | |||||| ||||| ||||| | ||| || ||||||||||| || |||| Sbjct 44508679 AATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCA 44508738 Query 33649 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTT 33708 | | || || || || ||||| ||||| || || || || || ||||||||||| |||| Sbjct 44508739 TCGGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTT 44508798 Query 33709 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACT 33765 |||||||||| ||||| | || | || ||||| | | | |||| ||||| Sbjct 44508799 CTACTGCAGCGAAGGCTACAACACGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGC 44508858 Query 33766 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33825 |||||||| |||||||| || ||||||||||||||| | |||||||| |||||| Sbjct 44508859 ACAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTT-CAATGGCATTGAAGAGAA 44508917 Query 33826 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33885 | | ||||| || |||||| | ||||| || || | |||||||||||||| |||| Sbjct 44508918 ATTCCTTTTCTTTGGGATCTTTGATGTAAGTGTCAATAAGGAGACTATACATTTCAGAAT 44508977 Query 33886 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 33945 | |||||||| ||||| || || || || |||||||| | || || |||||||| ||| Sbjct 44508978 GTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTA 44509037 Query 33946 CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACG 34005 | | |||||| || | ||||||||||| ||||| |||||||| |||||||| || Sbjct 44509038 TTTGGCTAAATCGCTCCACCAAATTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAA 44509097 Query 34006 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG---- 34061 ||| ||||| |||||||||| | || || || || | ||||| || || Sbjct 44509098 CCAGAACATGGGATATAAAATATCTCTCCTC-GGGCTTCGGGGATTCC---CAGTGCCGA 44509153 Query 34062 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 34121 || || || || | ||||| || || ||||| || || ||||| ||||| |||||| Sbjct 44509154 ATGTCCTTGGACAGGTCCACCTCCTCGGTGGTCCAGAAGGAAGCCTCCGCCTTCTTATAC 44509213 Query 34122 ATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162 || | |||||| ||||| || | || ||||| || ||||| Sbjct 44509214 ATCTGCCAGATATCATGGTACTCGACGGGGAAGATGACAAA 44509254 Score = 194 bits (214), Expect = 2e-44 Identities = 380/554 (69%), Gaps = 12/554 (2%) Strand=Plus/Minus Query 33594 CAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGG 33653 ||||| | |||||| || || ||||| | ||| || ||||| ||||| || ||||| || Sbjct 144080935 CAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGT 144080876 Query 33654 CCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACT 33713 || | || || ||||| ||||| | || || || || ||||||||| | | ||| || Sbjct 144080875 CCTTGTTTCTTGAGCCAGAATATCAATGCAAAAGAACCAGAAAAGAAGGTGCTTTCCACC 144080816 Query 33714 GCAGCAAAGGCA--AT--AAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCA-CT 33765 |||||||| || || | ||||||| | || | ||| ||||| | Sbjct 144080815 AAGGCAAAGGCTGCATGCAACACGTTCTCCATGGGTAACGTCTTTGTTCCCAATCCAACA 144080756 Query 33766 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33825 || ||||| | |||||||| || ||||| ||||||||||| |||||| | |||||| Sbjct 144080755 CAAGA-CCCAACCTGCCTTCTTCTTGACACA-GGCATCGTTTCAATGGCACTGAAGAGAA 144080698 Query 33826 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33885 | | |||| || |||||||| ||| || || || | ||| ||| ||||| |||| Sbjct 144080697 ATTCCCTTTCTTTGTTATCTTTA--ATATGTGTCAATAAGGAGATTATTTATTTCAGAAT 144080640 Query 33886 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 33945 | |||||||| || || || || || || ||||| || | || |||||| | |||| Sbjct 144080639 GCATGTTTTCTATAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTCTGTAATCCGAACTT 144080580 Query 33946 CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACG 34005 || | |||| |||| | || ||||||| | ||| ||||||| |||||||| || | Sbjct 144080579 CTTGAACAAATTGTTCCACCAAGTTTTCATCTATTATCCCATCACATGCTGCAAATAAAG 144080520 Query 34006 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATAT 34065 ||| | ||| |||||||||| ||| || || | || | ||| | || | Sbjct 144080519 CCAGAATATGGGATATAAAATATCTTTACTCAGGCTTCAGGGCTTCCCAGTGCCAAATGT 144080460 Query 34066 CTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATAT 34125 | || || | ||||| || | | |||| || || ||||| | || || ||||| | Sbjct 144080459 CCTTGGACAGGTCCACCTCCTGGGCCATCCAGAAAGAAACCTCTACTTTCTTTTACATTT 144080400 Query 34126 TCCAGATGTCATGA 34139 |||| || |||||| Sbjct 144080399 TCCAAATATCATGA 144080386 >seq1 Length=228573443 Score = 163 bits (180), Expect = 4e-35 Identities = 239/336 (71%), Gaps = 9/336 (3%) Strand=Plus/Plus Query 33694 AAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGC 33750 |||| ||||| |||| |||||||||||||| | || | || ||||| | | | Sbjct 139565255 AAAAAAAGATATCTTCCACTGCAGCAAAGGCTACAACACATTCACCATAGGTAGCCTCTT 139565314 Query 33751 TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 33810 |||| || || | ||||||| |||||||| |||||||| ||||| | Sbjct 139565315 TGTCCCCAATACAACTCAAGGCCCAATTTGCCTTCTTG---ACACAAGGT---GTTTCAA 139565368 Query 33811 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGAC 33870 ||| || |||||| | | |||| || |||||| | ||||| || || | |||| Sbjct 139565369 TGGTGTTGAAGAGAAATTCCCTTTCTTTGGAATCTTTTATGTAAGTGTCAATAAGGAGAC 139565428 Query 33871 TATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCT 33930 |||||||||| ||||| ||||||| ||||| || || || | |||||||| | || | Sbjct 139565429 TATACATTTCAGAATGTGTGTTTTCCATGGCAATTTGGAAGTCATAGAAACAGCGGGCTT 139565488 Query 33931 CGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCAC 33990 | |||||||| |||||| | |||||| || | || |||||||| ||||| ||||||| Sbjct 139565489 CTGTAATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCAC 139565548 Query 33991 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAAT 34026 | |||||||| || |||| ||| | |||||||| Sbjct 139565549 TTGCTGCAAAGAAAGCCAGAACACGGGATATAAAAT 139565584 >seq106 Length=111504155 Score = 114 bits (126), Expect = 2e-20 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||| ||||| ||||| | ||| |||||||| ||||| || ||||| || || || || | Sbjct 10258844 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 10258785 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | ||||| ||||| || || || || ||||||||||| || ||||| ||||||||||||| Sbjct 10258784 TGAGCCAGAATATCGACGCAAAAGAACCGGAAAAGAAAATGCCTTCCACTGCAGCAAAGG 10258725 Query 33724 C 33724 | Sbjct 10258724 C 10258724 Score = 100 bits (110), Expect = 4e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 33842 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33901 |||||| | ||||| || || | ||||||||||||||| ||||| |||||||| ||||| Sbjct 10256465 ATCTTTTATGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGC 10256406 Query 33902 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 33961 || || || || |||||||| | || || |||||||| |||||| | |||||| || Sbjct 10256405 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 10256346 >seq1024 Length=135753878 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 62113 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62172 |||| ||||| || |||||||| || |||||| ||| | || || || || ||||| | Sbjct 4049638 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 4049579 Query 62173 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62232 ||| |||||| |||||||| ||||| || || || || || ||||| || | | || | Sbjct 4049578 TCAAAGATTGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCATCTTGAGAACAGTTT 4049519 Query 62233 TTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62283 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 4049518 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 4049468 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447 || || |||||||| ||||| ||||| ||||| || || || ||||| || ||||| | Sbjct 4046796 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATG 4046737 Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507 ||||||||||| |||| || |||||||| || || || ||||| || || | | |||| Sbjct 4046736 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 4046677 Query 62508 CTATTTCTAAGACCGTA 62524 || ||||| | ||| || Sbjct 4046676 CTGTTTCTTATACCATA 4046660 Score = 100 bits (110), Expect = 4e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 63263 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCT 63322 || |||||||||||| |||||||| |||||||||||||| | || |||||||| | | Sbjct 4036135 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACG 4036076 Query 63323 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63382 || || || |||||||| ||||| || | ||| ||||| | | || || ||||||| Sbjct 4036075 CTGCTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCA 4036016 Query 63383 CGGTTCCAAGTATATGGC 63400 || |||| ||| || || Sbjct 4036015 AGGCTCCAGGTAAATAGC 4035998 Score = 91.5 bits (100), Expect = 2e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 62626 CATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGT 62685 |||| || || ||||| || | || || || || | ||| || || || | ||||| | Sbjct 4041604 CATAGGTTTCGTATGGGCCCTGCTCCTTGGCAAGGTCACAGCTGGCTTCCAGAGCACCAT 4041545 Query 62686 AATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGAT 62745 ||||||| ||||||||||||| |||||| || || ||||| | || ||||| || | Sbjct 4041544 AATAAATAGTTTCAAAGATCTGCTTATTCAGTAACTGGGCTTCTGCACTCTCAAAAGGGT 4041485 Query 62746 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62805 | | | || ||||| || || || | ||||| || ||||| || || || | ||| | Sbjct 4041484 ATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGGC 4041425 Query 62806 TCTTATTAGA 62815 ||||| || Sbjct 4041424 GTTTATTTGA 4041415 Score = 82.4 bits (90), Expect = 1e-10 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 63507 ATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 63566 || |||| ||| | || |||||| ||| | | | ||| ||||| || || ||| Sbjct 4032839 ATGTAGCTGCCAGTAGCCCGAATACAACTCACAGCAACACCAATTCCTCCAGCAGACTTA 4032780 Query 63567 GAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATG 63626 || || ||||| ||| | |||| |||||||| |||||||| ||||| ||||| |||| Sbjct 4032779 GAAATCAATGCACATTGCTTTAGAGTGTCATAAATGCCTTCAATGCTGTCATCTTTCATA 4032720 Query 63627 TTAAGTAGAAAACAGCTA 63644 | || |||||||||||| Sbjct 4032719 CTCAGAAGAAAACAGCTA 4032702 >seq793 Length=147911612 Score = 102 bits (112), Expect = 1e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 33606 TCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33665 || ||||| || || | ||| || ||||| |||||||| ||||| || || | ||| || Sbjct 104140658 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCTTT 104140717 Query 33666 AGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33724 ||||| ||||| | ||| || ||||| || ||||| | ||||||||| ||||||||||| Sbjct 104140718 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAACTCCTTCTACAGCAGCAAAGGC 104140776 >seq1056 Length=137163284 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 188489 GTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTT 188548 |||||||||||||||| ||| || | ||||||||||| |||||||| |||| ||| Sbjct 23490277 GTTACTTTCTATGATGTATATATTATTCTGCAAGCTTTCATACTGACTACTACAGTATTT 23490336 Query 188549 CTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGG 188607 ||| | ||||| | |||||||||||| |||| |||||||| ||| ||| | |||| Sbjct 23490337 TTTGGTTTGACTGTGTATACTCTACAATCTAAGAAGGATTTCAGCAAATTTGGAGCAGG 23490395 Score = 95.1 bits (104), Expect = 2e-14 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 188376 TCGGATCTATAGGCTTGATTTTCGCATTGACTTTACACAGACATAAACATCCCCTGAATC 188435 |||||||| | || |||||||| || ||||||||| |||||||||| ||||||| || | Sbjct 23483887 TCGGATCTCTGGGTTTGATTTTTGCGTTGACTTTAAACAGACATAAGTATCCCCTTAACC 23483946 Query 188436 TGTACCTACTTTGTGGATTT 188455 |||||||||||| ||||||| Sbjct 23483947 TGTACCTACTTTTTGGATTT 23483966 Score = 89.7 bits (98), Expect = 6e-13 Identities = 85/107 (79%), Gaps = 5/107 (5%) Strand=Plus/Plus Query 188140 TGTCGCCACCATGG-TCACACCGAGCCTCTG----CGTGCTCCTCCATCGAGGACGACTT 188194 ||| |||| ||||| | || |||| || | | | ||||||| |||||||||||||| Sbjct 23445586 TGTTGCCATCATGGCTGACCCCGACCCCCGGTACCCTCGCTCCTCGATCGAGGACGACTT 23445645 Query 188195 CAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCACATACGAATGG 188241 |||||||| |||| ||||| || |||||||||||||| ||||||| Sbjct 23445646 CAACTATGGCAGCAGCGTGGCCTCCGCCAGCGTGCACATCCGAATGG 23445692 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 188174 CTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCACAT 188233 |||||| |||||||||||||||||||||| |||| ||||| || |||||||||||||| Sbjct 23465322 CTCCTCGATCGAGGACGACTTCAACTATGGCAGCAGCGTGGCCTCCGCCAGCGTGCACAT 23465263 Query 188234 ACGAATGG 188241 ||||||| Sbjct 23465262 CCGAATGG 23465255 >seq1345 Length=61309027 Score = 93.3 bits (102), Expect = 5e-14 Identities = 180/259 (69%), Gaps = 10/259 (4%) Strand=Plus/Minus Query 31299 TCCTGTTGATCCAAACCCT--TGATCTCCTCTATCTGTACTATCTAGAGATTGTACTTCT 31356 ||| || || ||||| ||| ||| | ||| | ||| ||| | || ||| |||||| Sbjct 54759155 TCCGGTAGAGCCAAAACCTCCTGAACCCCTTTTGGTGTC--ATCCAAAGCTTGAACTTCT 54759098 Query 31357 TCAAGTTCTGGATAATATA-TACGTTGATAGATTAGCTGAGCTATTCTATCTCCAGTATT 31415 || | |||||||||| | | | |||| | | || ||||| || |||| ||| || | || Sbjct 54759097 TCTATTTCTGGATAAAAAAATCCGTTCACAAATGAGCTGTGCAATTCGATCACCTTTTTT 54759038 Query 31416 T-ACATTAAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAAT 31474 | || | |||| | ||| | | ||||| || | || || | ||||| ||||||| Sbjct 54759037 TGACTTCAAACTTTTCTTTGCAAAAATTAAAGAGTACAACACCAACATTTCCTCTATAAT 54758978 Query 31475 CTTCGTCTATTACACCGCCTCCTATAT---CAATGCCTTTTAGGGACAGACCAGACCTAG 31531 |||| ||| | ||||| |||||| || ||| | |||| | || |||||||| | Sbjct 54758977 CTTCATCTGTGACACCAGCTCCTACATCAACAAAGTGTTTTGCAGCCAAGCCAGACCTTG 54758918 Query 31532 GAGCTATTCTACCATAGCA 31550 |||||| ||| ||||| || Sbjct 54758917 GAGCTACTCT-CCATAACA 54758900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629467665468720