Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20troglodytes_20[refseq_20GCF_5F000001515.7_202016-05-03] 44,449 sequences; 3,231,170,666 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1588 367 2e-96 seq1481 367 2e-96 seq1056 165 1e-35 seq1 152 7e-32 seq106 114 2e-20 seq1024 111 2e-19 seq1345 89.7 7e-13 >seq1588 Length=553333 Score = 367 bits (406), Expect = 2e-96 Identities = 647/938 (69%), Gaps = 20/938 (2%) Strand=Plus/Minus Query 35811 TTTAAAAATCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 35867 |||| || ||| ||| || | |||| ||| |||| | || |||| |||||||| Sbjct 230606 TTTAGAAGTCAGCATTTAAGGTAAAAGAATTCTCTTTTGGACTTGACACCACTCCCATCC 230547 Query 35868 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 35927 | || || || || || | | || || || ||||| || | | ||| ||||| | Sbjct 230546 TCTGATACTCGCCTACTCCCCTCTCAAAGAAGTTAGTCTTTC-----AGTGAAATATTCT 230492 Query 35928 CCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 35987 || | || || ||||| | || ||| || |||| |||| ||| || | Sbjct 230491 CCGTAAAGTCAAATGGGCTCTCTACTCCGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 230432 Query 35988 ATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 36047 ||| ||||| ||||| || || ||| ||||| | |||||||| || || || | Sbjct 230431 GTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 230372 Query 36048 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 36107 | || || | ||| | || || ||||||||||| || || || | | || || Sbjct 230371 TCACAGGCAAGGCCTCGGTGAGGAATTCTTGTTCTATCTGAACAGCATTGATAATTATTT 230312 Query 36108 ATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 36167 | | ||| | || || ||| | | | ||||| |||||||| || || |||| Sbjct 230311 CTCTCACTTTCTCCTCCGATGGTTTGTGTACCAGGTGTTTGAACATCAAGCAAGCAAAAT 230252 Query 36168 CGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 36227 | ||||||| |||||| ||||| ||||| | ||| |||||||||||||| || ||||| Sbjct 230251 CACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCG 230192 Query 36228 GGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTA 36287 | || || || || ||||| ||||| || ||||| || ||||||||||| || ||||||| Sbjct 230191 GTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCTA 230132 Query 36288 CTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACTTTT 36344 |||| || ||||| | || | || ||||| | | | |||| ||||| Sbjct 230131 CTGCAGCGAAGGCTACAACACGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGCACA 230072 Query 36345 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGt 36404 |||||||| |||||||| || ||||||||||| || || || ||||| |||||| | | Sbjct 230071 AGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGT-TCAATGGCATTGAAGAGAAATT 230013 Query 36405 ttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAA 36464 ||||| || |||||| | || || ||||| | |||||||||||||| ||||| | Sbjct 230012 CCTTTTCTTTGGGATCTTTGATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTA 229953 Query 36465 TGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTG 36524 ||||||| ||||| ||||| || || |||||||| | || || |||||||| ||| | Sbjct 229952 TGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTATTT 229893 Query 36525 TACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCA 36584 | |||||| || | ||||||||||| ||||| || ||||| |||||||| || ||| Sbjct 229892 GGCTAAATCGCTCCACCAAATTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAACCA 229833 Query 36585 ATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTG----ATA 36640 ||||| |||||||||| | || | || || | ||||| || || || Sbjct 229832 GAACATGGGATATAAAATATCTCTC-CTCGGGCTTCGGGGATTCC---CAGTGCCGAATG 229777 Query 36641 TCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATA 36700 || || || | ||||| || || ||||| || || ||||| ||||| |||||||| Sbjct 229776 TCCTTGGACAGGTCCACCTCCTCGGTGGTCCAGAAGGAAGCCTCCGCCTTCTTATACATC 229717 Query 36701 TTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 | |||||| ||||| || | | || || || ||||| Sbjct 229716 TGCCAGATATCATGGTACTCGACGGGGAAGATGACAAA 229679 >seq1481 Length=155549662 Score = 367 bits (406), Expect = 2e-96 Identities = 647/938 (69%), Gaps = 20/938 (2%) Strand=Plus/Plus Query 35811 TTTAAAAATCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 35867 |||| || ||| ||| || | |||| ||| |||| | || |||| |||||||| Sbjct 44508327 TTTAGAAGTCAGCATTTAAGGTAAAAGAATTCTCTTTTGGACTTGACACCACTCCCATCC 44508386 Query 35868 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 35927 | || || || || || | | || || || ||||| || | | ||| ||||| | Sbjct 44508387 TCTGATACTCGCCTACTCCCCTCTCAAAGAAGTTAGTCTTTC-----AGTGAAATATTCT 44508441 Query 35928 CCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 35987 || | || || ||||| | || ||| || |||| |||| ||| || | Sbjct 44508442 CCGTAAAGTCAAATGGGCTCTCTACTCCGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 44508501 Query 35988 ATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 36047 ||| ||||| ||||| || || ||| ||||| | |||||||| || || || | Sbjct 44508502 GTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 44508561 Query 36048 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 36107 | || || | ||| | || || ||||||||||| || || || | | || || Sbjct 44508562 TCACAGGCAAGGCCTCGGTGAGGAATTCTTGTTCTATCTGAACAGCATTGATAATTATTT 44508621 Query 36108 ATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 36167 | | ||| | || || ||| | | | ||||| |||||||| || || |||| Sbjct 44508622 CTCTCACTTTCTCCTCCGATGGTTTGTGTACCAGGTGTTTGAACATCAAGCAAGCAAAAT 44508681 Query 36168 CGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 36227 | ||||||| |||||| ||||| ||||| | ||| |||||||||||||| || ||||| Sbjct 44508682 CACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCG 44508741 Query 36228 GGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTA 36287 | || || || || ||||| ||||| || ||||| || ||||||||||| || ||||||| Sbjct 44508742 GTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCTA 44508801 Query 36288 CTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACTTTT 36344 |||| || ||||| | || | || ||||| | | | |||| ||||| Sbjct 44508802 CTGCAGCGAAGGCTACAACACGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGCACA 44508861 Query 36345 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGt 36404 |||||||| |||||||| || ||||||||||| || || || ||||| |||||| | | Sbjct 44508862 AGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGT-TCAATGGCATTGAAGAGAAATT 44508920 Query 36405 ttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAA 36464 ||||| || |||||| | || || ||||| | |||||||||||||| ||||| | Sbjct 44508921 CCTTTTCTTTGGGATCTTTGATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTA 44508980 Query 36465 TGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTG 36524 ||||||| ||||| ||||| || || |||||||| | || || |||||||| ||| | Sbjct 44508981 TGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTATTT 44509040 Query 36525 TACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCA 36584 | |||||| || | ||||||||||| ||||| || ||||| |||||||| || ||| Sbjct 44509041 GGCTAAATCGCTCCACCAAATTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAACCA 44509100 Query 36585 ATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTG----ATA 36640 ||||| |||||||||| | || | || || | ||||| || || || Sbjct 44509101 GAACATGGGATATAAAATATCTCTC-CTCGGGCTTCGGGGATTCC---CAGTGCCGAATG 44509156 Query 36641 TCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATA 36700 || || || | ||||| || || ||||| || || ||||| ||||| |||||||| Sbjct 44509157 TCCTTGGACAGGTCCACCTCCTCGGTGGTCCAGAAGGAAGCCTCCGCCTTCTTATACATC 44509216 Query 36701 TTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 | |||||| ||||| || | | || || || ||||| Sbjct 44509217 TGCCAGATATCATGGTACTCGACGGGGAAGATGACAAA 44509254 Score = 199 bits (220), Expect = 5e-46 Identities = 381/554 (69%), Gaps = 12/554 (2%) Strand=Plus/Minus Query 36170 CAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGG 36229 ||||||| |||||| || || ||||| | ||| |||||||| ||||| || ||||| || Sbjct 144080935 CAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGT 144080876 Query 36230 CCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACT 36289 || | || || ||||| ||||| | ||||| || ||||||||||| | | ||| || Sbjct 144080875 CCTTGTTTCTTGAGCCAGAATATCAATGCAAAAGAACCAGAAAAGAAGGTGCTTTCCACC 144080816 Query 36290 GCCGCAAAGGC--AAT--AAGTCTCTCTCCAT---AACCGGCACTGTCATGTATCC-ACT 36341 |||||||| || || | ||||||| | || | ||| |||| || Sbjct 144080815 AAGGCAAAGGCTGCATGCAACACGTTCTCCATGGGTAACGTCTTTGTTCCCAATCCAACA 144080756 Query 36342 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGAT 36401 || ||||| | |||||||| || |||| |||||| || || || ||| | |||||| Sbjct 144080755 CAAGA-CCCAACCTGCCTTCTTCTTGACAC-AGGCATCGTTTCAATGGCACTGAAGAGAA 144080698 Query 36402 AGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAAT 36461 | | |||| || |||||||| |||||| ||||| | ||| ||| ||||| |||| Sbjct 144080697 ATTCCCTTTCTTTGTTATCTTTA--ATATGTGTCAATAAGGAGATTATTTATTTCAGAAT 144080640 Query 36462 GAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT 36521 | |||||||| || || ||||| || || ||||| || | || |||||| | |||| Sbjct 144080639 GCATGTTTTCTATAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTCTGTAATCCGAACTT 144080580 Query 36522 CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 36581 || | |||| |||| | || ||||||| | ||| || |||| |||||||| || | Sbjct 144080579 CTTGAACAAATTGTTCCACCAAGTTTTCATCTATTATCCCATCACATGCTGCAAATAAAG 144080520 Query 36582 CCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATAT 36641 ||| | ||| |||||||||| ||| | || | || | ||| | || | Sbjct 144080519 CCAGAATATGGGATATAAAATATCTTTACTCAGGCTTCAGGGCTTCCCAGTGCCAAATGT 144080460 Query 36642 CTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATAT 36701 | || || | ||||| || | | |||| || || ||||| | || || ||||| | Sbjct 144080459 CCTTGGACAGGTCCACCTCCTGGGCCATCCAGAAAGAAACCTCTACTTTCTTTTACATTT 144080400 Query 36702 TCCAGATGTCATGA 36715 |||| || |||||| Sbjct 144080399 TCCAAATATCATGA 144080386 >seq1056 Length=137163284 Score = 165 bits (182), Expect = 1e-35 Identities = 166/215 (77%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 9218 TTTTAAACTTTATTTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATT 9277 |||||| ||| || |||||| | |||||| || | ||||||| |||| ||| ||||| Sbjct 23498278 TTTTAA---TTACTTTTTATTAACTGCTTCCAGAAACCGTAACAGGTGCAGGAATAGATT 23498222 Query 9278 GATGATATCCAAGTAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATG 9337 ||||||||||||||||| |||| | ||||| || || |||||||| || || ||||| Sbjct 23498221 GATGATATCCAAGTAGAGGCTGATGGCAGCTAATACGTACTCTTCAGGTGACAGTTTATG 23498162 Query 9338 TATTAGTGAGTGCGTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGA 9397 || |||||||| ||||||||||| |||||||| ||||| | |||||| || ||| | Sbjct 23498161 CATCAGTGAGTGTGTGTCATAGATGATGAATCCACAGAAAAGAAGGGCTCCTGCAGCGGC 23498102 Query 9398 CAGGACCAGCTCCACTGTTTCACTTTGCACAAATA 9432 | ||||| ||||| | | ||||| | | ||||| Sbjct 23498101 TAAGACCAACTCCATTATCTCACTATAAAAAAATA 23498067 Score = 129 bits (142), Expect = 8e-25 Identities = 100/119 (84%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 9480 CCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGA 9539 |||||||||| ||| |||||||| |||| |||||||||||||| |||||| | ||| | Sbjct 23490395 CCTGCTCCAAATTTGCTGAAATCCTTCTTAGATTGTAGAGTATACACAGTCAAACCAAAA 23490336 Query 9540 AACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAAC 9598 || |||| ||||||||| ||||||||||||| || | || ||||||||||||||||| Sbjct 23490335 AATACTGTAGTAGTCAGTATGAAAGCTTGCAGAATAATATATACATCATAGAAAGTAAC 23490277 Score = 89.7 bits (98), Expect = 7e-13 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 ||||||| |||||||| ||||| || ||||| |||||||||||||||||||||||||| Sbjct 23445692 CCATTCGGATGTGCACGCTGGCGGAGGCCACGCTGCTGCCATAGTTGAAGTCGTCCTCGA 23445633 Query 9907 TGGAGGAGC 9915 | ||||||| Sbjct 23445632 TCGAGGAGC 23445624 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 ||||||| |||||||| ||||| || ||||| |||||||||||||||||||||||||| Sbjct 23465255 CCATTCGGATGTGCACGCTGGCGGAGGCCACGCTGCTGCCATAGTTGAAGTCGTCCTCGA 23465314 Query 9907 TGGAGGAG 9914 | |||||| Sbjct 23465315 TCGAGGAG 23465322 >seq1 Length=228573443 Score = 152 bits (168), Expect = 7e-32 Identities = 188/256 (73%), Gaps = 6/256 (2%) Strand=Plus/Plus Query 36347 GCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGttt 36406 ||||||| |||||||| |||||||| ||| || || | || |||||| | | Sbjct 139565335 GCCCAATTTGCCTTCTTG---ACACAAGG---TGTTTCAATGGTGTTGAAGAGAAATTCC 139565388 Query 36407 ttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATG 36466 |||| || |||||| | || || ||||| | |||||||||||||| ||||| || Sbjct 139565389 CTTTCTTTGGAATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTGTG 139565448 Query 36467 TTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTA 36526 ||||| ||||| ||||| || | |||||||| | || || |||||||| |||||| Sbjct 139565449 TTTTCCATGGCAATTTGGAAGTCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGG 139565508 Query 36527 CAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAAT 36586 | |||||| || | || |||||||| ||||| || ||||| |||||||| || |||| Sbjct 139565509 CTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAGCCAGA 139565568 Query 36587 ACATGTTTTATAAAAT 36602 ||| | |||||||| Sbjct 139565569 ACACGGGATATAAAAT 139565584 >seq106 Length=111504155 Score = 114 bits (126), Expect = 2e-20 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239 |||| ||||| ||||| | ||| || ||||| ||||| || ||||| || || || || | Sbjct 10258844 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 10258785 Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299 | ||||| ||||| |||||||| || || ||||||||||| ||||| ||||| ||||||| Sbjct 10258784 TGAGCCAGAATATCGACGCAAAAGAACCGGAAAAGAAAATGCCTTCCACTGCAGCAAAGG 10258725 Query 36300 C 36300 | Sbjct 10258724 C 10258724 Score = 104 bits (114), Expect = 3e-17 Identities = 95/120 (79%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 36418 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 36477 |||||| | || || ||||| | ||||||||||||||| ||||| |||||||| ||||| Sbjct 10256465 ATCTTTTATGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGC 10256406 Query 36478 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 36537 ||||| || || |||||||| | || || |||||||| |||||| | |||||| || Sbjct 10256405 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 10256346 >seq1024 Length=135753878 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 64906 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 64965 |||| ||||| || |||||||| || |||||| ||| | || || || || ||||| | Sbjct 4049638 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 4049579 Query 64966 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 65025 ||| |||||| |||||||| ||||| || || || || || ||||| || | | || | Sbjct 4049578 TCAAAGATTGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCATCTTGAGAACAGTTT 4049519 Query 65026 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 65076 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 4049518 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 4049468 Score = 107 bits (118), Expect = 3e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240 || ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | Sbjct 4046796 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATG 4046737 Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300 ||||||||||| |||| || |||||||| || || || ||||| || || | | |||| Sbjct 4046736 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 4046677 Query 65301 CTATTTCTAAGACCGTA 65317 || ||||| | ||| || Sbjct 4046676 CTGTTTCTTATACCATA 4046660 Score = 100 bits (110), Expect = 4e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 66056 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCT 66115 || |||||||||||| |||||||| |||||||||||||| | || | |||||||| | Sbjct 4036135 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACG 4036076 Query 66116 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCA 66175 || || || |||||||| ||||| || | ||| ||||| | | || || ||||||| Sbjct 4036075 CTGCTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCA 4036016 Query 66176 CGGTTCCAAGTATATGGC 66193 || |||| ||| || || Sbjct 4036015 AGGCTCCAGGTAAATAGC 4035998 Score = 87.8 bits (96), Expect = 2e-12 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858 |||| || | ||| |||||||||||||| | || || || || || || || || | | Sbjct 4020586 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCGATCCTGGCTGCCAGGA 4020527 Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918 | ||||| || || || | ||||| | || || ||| |||| || |||||||| || | Sbjct 4020526 TAGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAGAGTATCTA 4020467 Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964 ||| || || || || ||| | || | |||||||| || ||||| Sbjct 4020466 GTTCCACTGTGGTGACCCCACTGTACAAGCCTTGGATTACTTTCAT 4020421 >seq1345 Length=61309027 Score = 89.7 bits (98), Expect = 7e-13 Identities = 179/259 (69%), Gaps = 10/259 (4%) Strand=Plus/Minus Query 33900 TCCGGTTGATCCAAACCCT--TGATCTCCTCTATCTGTACTATCTAGAGATTGTACTTCT 33957 |||||| || ||||| ||| ||| | ||| | ||| ||| | || ||| |||||| Sbjct 54759155 TCCGGTAGAGCCAAAACCTCCTGAACCCCTTTTGGTGTC--ATCCAAAGCTTGAACTTCT 54759098 Query 33958 TTCAGTTCTGGATAATATA-TACGTTGATAGATTAGCTGAGCTATTCTATCCCCCGTATT 34016 | | |||||||||| | | | |||| | | || ||||| || |||| ||| || | || Sbjct 54759097 TCTATTTCTGGATAAAAAAATCCGTTCACAAATGAGCTGTGCAATTCGATCACCTTTTTT 54759038 Query 34017 T-ACATTGAATGTACATTTTCCATTATTAATAAGAATGACTCCTATATTTCCCCTATAAT 34075 | || | || | ||| | | ||||| || | || || | |||||| ||||||| Sbjct 54759037 TGACTTCAAACTTTTCTTTGCAAAAATTAAAGAGTACAACACCAACATTTCCTCTATAAT 54758978 Query 34076 CTTCGTCTATTACACCGCCTCCTATATCAATA---CCTTTTAGGGACAGACCAGACCTAG 34132 |||| ||| | ||||| |||||| ||||| | |||| | || |||||||| | Sbjct 54758977 CTTCATCTGTGACACCAGCTCCTACATCAACAAAGTGTTTTGCAGCCAAGCCAGACCTTG 54758918 Query 34133 GAGCTATTCTACCATAGCA 34151 |||||| ||| ||||| || Sbjct 54758917 GAGCTACTCT-CCATAACA 54758900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657807110965160