Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20troglodytes_20[refseq_20GCF_5F000001515.7_202016-05-03] 44,449 sequences; 3,231,170,666 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1588 379 3e-100 seq1481 379 3e-100 seq1 145 1e-29 seq1024 111 2e-19 seq106 95.1 2e-14 seq1345 84.2 3e-11 >seq1588 Length=553333 Score = 379 bits (420), Expect = 3e-100 Identities = 650/938 (69%), Gaps = 20/938 (2%) Strand=Plus/Minus Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 41774 |||| |||||| ||| ||| | |||| ||| |||| | || |||| |||||||| Sbjct 230606 TTTAGAAGTCAGCATTTAAGGTAAAAGAATTCTCTTTTGGACTTGACACCACTCCCATCC 230547 Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834 | || || || || || | | || || || |||||||||| | ||| ||||| | Sbjct 230546 TCTGATACTCGCCTACTCCCCTCTCAAAGAAGTTAGTCTTTC-----AGTGAAATATTCT 230492 Query 41835 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 41894 || | || ||||| || | || ||| || |||| |||| ||| || | Sbjct 230491 CCGTAAAGTCAAATGGGCTCTCTACTCCGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 230432 Query 41895 ATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 41954 ||| ||||| | || || || ||| ||||| | |||||||| || || || | Sbjct 230431 GTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 230372 Query 41955 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 42014 | || || | ||| | || || ||||||||||| || || || | | || || Sbjct 230371 TCACAGGCAAGGCCTCGGTGAGGAATTCTTGTTCTATCTGAACAGCATTGATAATTATTT 230312 Query 42015 ATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 42074 ||| ||| | || || ||| | | | ||||| |||||||| || || |||| Sbjct 230311 CTCTCACTTTCTCCTCCGATGGTTTGTGTACCAGGTGTTTGAACATCAAGCAAGCAAAAT 230252 Query 42075 CGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 42134 | ||||| | |||||||||||| ||||| | ||| |||||||||||||| || ||||| Sbjct 230251 CACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCG 230192 Query 42135 GGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTA 42194 | || || || || ||||| ||||| || ||||| || |||||||||||||| ||||||| Sbjct 230191 GTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCTA 230132 Query 42195 CTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACTTTT 42251 |||| || ||||| | || | || ||||| | | | |||| ||||| Sbjct 230131 CTGCAGCGAAGGCTACAACACGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGCACA 230072 Query 42252 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGt 42311 |||||||| |||||||| || ||||||||||||||| | |||||||| |||||| | | Sbjct 230071 AGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTT-CAATGGCATTGAAGAGAAATT 230013 Query 42312 ttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAA 42371 ||||| || |||||| | || || || || | |||||||||||||| ||||| | Sbjct 230012 CCTTTTCTTTGGGATCTTTGATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTA 229953 Query 42372 TGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTG 42431 ||||||| ||||| || || || || |||||||| | ||| || |||| ||| ||| | Sbjct 229952 TGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTATTT 229893 Query 42432 TACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCA 42491 | |||||| || | |||||||| || ||||| || ||||| |||||||| || ||| Sbjct 229892 GGCTAAATCGCTCCACCAAATTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAACCA 229833 Query 42492 ATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTG----ATA 42547 ||||| |||||||||| | || || || || ||||| || || || Sbjct 229832 GAACATGGGATATAAAATATCTCTCCTCGGGC-TTCGGGGATTCC---CAGTGCCGAATG 229777 Query 42548 TCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATA 42607 || || || | || || || || ||||| || || || || ||||| |||||||| Sbjct 229776 TCCTTGGACAGGTCCACCTCCTCGGTGGTCCAGAAGGAAGCCTCCGCCTTCTTATACATC 229717 Query 42608 TTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 | |||||||||||| || | | ||||| || ||||| Sbjct 229716 TGCCAGATATCATGGTACTCGACGGGGAAGATGACAAA 229679 >seq1481 Length=155549662 Score = 379 bits (420), Expect = 3e-100 Identities = 650/938 (69%), Gaps = 20/938 (2%) Strand=Plus/Plus Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 41774 |||| |||||| ||| ||| | |||| ||| |||| | || |||| |||||||| Sbjct 44508327 TTTAGAAGTCAGCATTTAAGGTAAAAGAATTCTCTTTTGGACTTGACACCACTCCCATCC 44508386 Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834 | || || || || || | | || || || |||||||||| | ||| ||||| | Sbjct 44508387 TCTGATACTCGCCTACTCCCCTCTCAAAGAAGTTAGTCTTTC-----AGTGAAATATTCT 44508441 Query 41835 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 41894 || | || ||||| || | || ||| || |||| |||| ||| || | Sbjct 44508442 CCGTAAAGTCAAATGGGCTCTCTACTCCGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 44508501 Query 41895 ATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 41954 ||| ||||| | || || || ||| ||||| | |||||||| || || || | Sbjct 44508502 GTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 44508561 Query 41955 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 42014 | || || | ||| | || || ||||||||||| || || || | | || || Sbjct 44508562 TCACAGGCAAGGCCTCGGTGAGGAATTCTTGTTCTATCTGAACAGCATTGATAATTATTT 44508621 Query 42015 ATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 42074 ||| ||| | || || ||| | | | ||||| |||||||| || || |||| Sbjct 44508622 CTCTCACTTTCTCCTCCGATGGTTTGTGTACCAGGTGTTTGAACATCAAGCAAGCAAAAT 44508681 Query 42075 CGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 42134 | ||||| | |||||||||||| ||||| | ||| |||||||||||||| || ||||| Sbjct 44508682 CACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCG 44508741 Query 42135 GGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTA 42194 | || || || || ||||| ||||| || ||||| || |||||||||||||| ||||||| Sbjct 44508742 GTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCTA 44508801 Query 42195 CTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACTTTT 42251 |||| || ||||| | || | || ||||| | | | |||| ||||| Sbjct 44508802 CTGCAGCGAAGGCTACAACACGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGCACA 44508861 Query 42252 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGt 42311 |||||||| |||||||| || ||||||||||||||| | |||||||| |||||| | | Sbjct 44508862 AGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTT-CAATGGCATTGAAGAGAAATT 44508920 Query 42312 ttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAA 42371 ||||| || |||||| | || || || || | |||||||||||||| ||||| | Sbjct 44508921 CCTTTTCTTTGGGATCTTTGATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTA 44508980 Query 42372 TGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTG 42431 ||||||| ||||| || || || || |||||||| | ||| || |||| ||| ||| | Sbjct 44508981 TGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTATTT 44509040 Query 42432 TACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCA 42491 | |||||| || | |||||||| || ||||| || ||||| |||||||| || ||| Sbjct 44509041 GGCTAAATCGCTCCACCAAATTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAACCA 44509100 Query 42492 ATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTG----ATA 42547 ||||| |||||||||| | || || || || ||||| || || || Sbjct 44509101 GAACATGGGATATAAAATATCTCTCCTCGGGC-TTCGGGGATTCC---CAGTGCCGAATG 44509156 Query 42548 TCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATA 42607 || || || | || || || || ||||| || || || || ||||| |||||||| Sbjct 44509157 TCCTTGGACAGGTCCACCTCCTCGGTGGTCCAGAAGGAAGCCTCCGCCTTCTTATACATC 44509216 Query 42608 TTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 | |||||||||||| || | | ||||| || ||||| Sbjct 44509217 TGCCAGATATCATGGTACTCGACGGGGAAGATGACAAA 44509254 Score = 205 bits (226), Expect = 1e-47 Identities = 386/558 (69%), Gaps = 20/558 (4%) Strand=Plus/Minus Query 42077 CAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGG 42136 ||||| | ||||||||| || ||||| | ||| |||||||| ||||| || ||||| || Sbjct 144080935 CAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGT 144080876 Query 42137 CCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACT 42196 || | || || ||||| ||||| | ||||| || |||||||||||| | | ||| || Sbjct 144080875 CCTTGTTTCTTGAGCCAGAATATCAATGCAAAAGAACCAGAAAAGAAGGTGCTTTCCACC 144080816 Query 42197 GCCGCAAAGGCA--AT--AAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCA-CT 42248 |||||||| || || | ||||||| | || | ||| ||||| | Sbjct 144080815 AAGGCAAAGGCTGCATGCAACACGTTCTCCATGGGTAACGTCTTTGTTCCCAATCCAACA 144080756 Query 42249 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 42308 || ||||| | |||||||| || ||||| ||||||||||| |||||| | |||||| Sbjct 144080755 CAAGA-CCCAACCTGCCTTCTTCTTGACACA-GGCATCGTTTCAATGGCACTGAAGAGAA 144080698 Query 42309 AGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAAT 42368 | | |||| || |||||||| |||||| || || | ||| ||| ||||| |||| Sbjct 144080697 ATTCCCTTTCTTTGTTATCTTTA--ATATGTGTCAATAAGGAGATTATTTATTTCAGAAT 144080640 Query 42369 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTT 42428 | |||||||| || || || || || || ||||| || || || |||| | | |||| Sbjct 144080639 GCATGTTTTCTATAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTCTGTAATCCGAACTT 144080580 Query 42429 CTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACG 42488 || | |||| |||| | || ||||| | | ||| || |||| |||||||| || | Sbjct 144080579 CTTGAACAAATTGTTCCACCAAGTTTTCATCTATTATCCCATCACATGCTGCAAATAAAG 144080520 Query 42489 CCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTG---- 42544 ||| | ||| |||||||||| ||| || || || | |||| || || Sbjct 144080519 CCAGAATATGGGATATAAAATATCTTTACTCAGG-CTTCAGGGCTTCC---CAGTGCCAA 144080464 Query 42545 ATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATAC 42604 || || || || | || || || | || |||| || || | ||| | || || ||| Sbjct 144080463 ATGTCCTTGGACAGGTCCACCTCCTGGGCCATCCAGAAAGAAACCTCTACTTTCTTTTAC 144080404 Query 42605 ATATTCCAGATATCATGA 42622 || ||||| ||||||||| Sbjct 144080403 ATTTTCCAAATATCATGA 144080386 >seq1 Length=228573443 Score = 145 bits (160), Expect = 1e-29 Identities = 235/336 (70%), Gaps = 9/336 (3%) Strand=Plus/Plus Query 42177 AAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCAC 42233 |||| ||||| |||| ||||| |||||||| | || | || ||||| | | | Sbjct 139565255 AAAAAAAGATATCTTCCACTGCAGCAAAGGCTACAACACATTCACCATAGGTAGCCTCTT 139565314 Query 42234 TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 42293 |||| || || | ||||||| |||||||| |||||||| ||||| | Sbjct 139565315 TGTCCCCAATACAACTCAAGGCCCAATTTGCCTTCTTG---ACACAAGGT---GTTTCAA 139565368 Query 42294 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGAC 42353 ||| || |||||| | | |||| || |||||| | || || || || | |||| Sbjct 139565369 TGGTGTTGAAGAGAAATTCCCTTTCTTTGGAATCTTTTATGTAAGTGTCAATAAGGAGAC 139565428 Query 42354 TATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCT 42413 |||||||||| ||||| ||||||| ||||| || || || | |||||||| | ||| | Sbjct 139565429 TATACATTTCAGAATGTGTGTTTTCCATGGCAATTTGGAAGTCATAGAAACAGCGGGCTT 139565488 Query 42414 CGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCAC 42473 | |||| ||| |||||| | |||||| || | || ||||| || ||||| || |||| Sbjct 139565489 CTGTAATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCAC 139565548 Query 42474 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAAT 42509 | |||||||| || |||| ||| | |||||||| Sbjct 139565549 TTGCTGCAAAGAAAGCCAGAACACGGGATATAAAAT 139565584 >seq1024 Length=135753878 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927 |||| ||||| || |||||||| || |||||| |||| |||| || || ||||| || | Sbjct 4049638 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 4049579 Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987 ||| || || |||||||| ||||| || || || || || ||||| || | | || | Sbjct 4049578 TCAAAGATTGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCATCTTGAGAACAGTTT 4049519 Query 70988 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 71038 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 4049518 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 4049468 Score = 107 bits (118), Expect = 3e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 ||||||||||| |||||||| |||||||||||||| | || |||||||||| | ||| Sbjct 4036131 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGCTGC 4036072 Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141 || || |||||||| ||||| || | ||| ||||| | | || || ||||||| || Sbjct 4036071 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCAAGGC 4036012 Query 72142 TCCAAGTATATGGC 72155 |||| ||| || || Sbjct 4036011 TCCAGGTAAATAGC 4035998 Score = 105 bits (116), Expect = 9e-18 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 71143 ACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACT 71202 || ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | Sbjct 4046796 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATG 4046737 Query 71203 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGA 71262 ||||||||||| |||| || |||||||| || || || ||||| || || | | || | Sbjct 4046736 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 4046677 Query 71263 CTATTTCTAAGACCAT 71278 || ||||| | ||||| Sbjct 4046676 CTGTTTCTTATACCAT 4046661 Score = 86.0 bits (94), Expect = 8e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 71381 CATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCAT 71440 |||| || |||||||| || | | | ||| || ||||| || || || | || |||| Sbjct 4041604 CATAGGTTTCGTATGGGCCCTGCTCCTTGGCAAGGTCACAGCTGGCTTCCAGAGCACCAT 4041545 Query 71441 AATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGAT 71500 ||||||| ||||| || |||| |||||| || || ||||| | || ||||| || | Sbjct 4041544 AATAAATAGTTTCAAAGATCTGCTTATTCAGTAACTGGGCTTCTGCACTCTCAAAAGGGT 4041485 Query 71501 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTC 71560 | | | || ||||| || ||||| | ||||| || ||||| || || || | || | Sbjct 4041484 ATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGGC 4041425 Query 71561 TCTTATTAGA 71570 ||||| || Sbjct 4041424 GTTTATTTGA 4041415 >seq106 Length=111504155 Score = 95.1 bits (104), Expect = 2e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 42325 ATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGC 42384 |||||| | || || || || | ||||||||||||||| ||||| |||||||| ||||| Sbjct 10256465 ATCTTTTATGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGC 10256406 Query 42385 CATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTC 42444 || || || || |||||||| | ||| || |||| ||| |||||| | |||||| || Sbjct 10256405 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 10256346 Score = 87.8 bits (96), Expect = 2e-12 Identities = 103/139 (74%), Gaps = 3/139 (2%) Strand=Plus/Minus Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 41774 |||| |||||| |||| || | |||| ||| ||| | || ||||| |||||||| Sbjct 10261010 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 10260951 Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834 | || || || || || | || || || || |||||||||||||||| ||| ||||| | Sbjct 10260950 TCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 10260891 Query 41835 CCATGAAATCAAACGGATT 41853 |||| || ||||| || || Sbjct 10260890 CCATAAAGTCAAATGGGTT 10260872 >seq1345 Length=61309027 Score = 84.2 bits (92), Expect = 3e-11 Identities = 178/259 (69%), Gaps = 10/259 (4%) Strand=Plus/Minus Query 39798 TCCAGTTGATCCAAATCCT--TGAGCTCCTCTATCTGTACTATCTAGAGATTGTACTTCT 39855 ||| || || ||||| ||| ||| | ||| | ||| ||| | || ||| |||||| Sbjct 54759155 TCCGGTAGAGCCAAAACCTCCTGAACCCCTTTTGGTGTC--ATCCAAAGCTTGAACTTCT 54759098 Query 39856 TCCAGTTCTGGATAATATA-TACGTTGATAGATTAGCTGAGCTATTCTATCTCCCGTATT 39914 || | |||||||||| | | | |||| | | || ||||| || |||| ||| || | || Sbjct 54759097 TCTATTTCTGGATAAAAAAATCCGTTCACAAATGAGCTGTGCAATTCGATCACCTTTTTT 54759038 Query 39915 TACATTGAAAGTACATTTTCCATTA-TTAATAAGAATGACTCCTATGTTTCCCCTATAAT 39973 | || ||| | ||| || | |||| || | || || | ||||| ||||||| Sbjct 54759037 TGACTTCAAACTTTTCTTTGCAAAAATTAAAGAGTACAACACCAACATTTCCTCTATAAT 54758978 Query 39974 CTTCGTCTATTACACCGCCTCCTATATCAATA---CCTTTTAGGGACAGACCAGACCTAG 40030 |||| ||| | ||||| |||||| ||||| | |||| | || |||||||| | Sbjct 54758977 CTTCATCTGTGACACCAGCTCCTACATCAACAAAGTGTTTTGCAGCCAAGCCAGACCTTG 54758918 Query 40031 GAGCTATTCTACCATAGCA 40049 |||||| ||| ||||| || Sbjct 54758917 GAGCTACTCT-CCATAACA 54758900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670766306671240