Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20troglodytes_20[refseq_20GCF_5F000001515.7_202016-05-03] 44,449 sequences; 3,231,170,666 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1056 140 3e-28 seq1283 113 4e-20 seq401 96.9 3e-15 seq866 93.3 4e-14 seq301 91.5 1e-13 seq1061 87.8 2e-12 seq183 86.0 6e-12 >seq1056 Length=137163284 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || | ||||| ||||| ||||| || || || | ||| || || | Sbjct 128407834 CCACCTCTGAGACGGAGCACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAGTCAGAC 128407893 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| ||| |||||||| ||||| ||||||| || || ||||| || |||||| Sbjct 128407894 AGGGTGCGCCCATCTTCCAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGA 128407953 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||| ||||| | || ||||| |||||| ||| |||||| | | ||||| Sbjct 128407954 ATGCCTTCCTTGTCTTGGATCTTTGCTTTGACGTTCTCGATGGTGTCACTGGGCTCGACC 128408013 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| ||||||||||| ||||| || || ||||| ||||||||||| Sbjct 128408014 TCAAGGGTGATGGTTTTGCCAGTGAGTGTCTTCACGAAGATCTGCAT 128408060 Score = 134 bits (148), Expect = 1e-26 Identities = 173/237 (73%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || || ||||| | || | ||||| |||||| || || || || || | ||| | Sbjct 128407144 TTTGCATCCCACCTCTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGT 128407203 Query 94833 AATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTG 94890 | || || | || || ||| ||||||||||||||| ||||||| || || ||||| Sbjct 128407204 AGTCAGACA--GGGTACGACCATCTTCCAGCTGTTTTCCGGCAAAGATCAACCTCTGCTG 128407261 Query 94891 ATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGC 94950 ||| |||||||| ||||| || || | || ||||||||||| ||| |||||| Sbjct 128407262 ATCAGGAGGAATGCCTTCCTTATCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCACT 128407321 Query 94951 GTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | | || || || | |||||||| || ||||| || || ||||| ||||||||||| Sbjct 128407322 GGGCTCCACCTCGAGGGTGATGGTCTTACCAGTCAGGGTCTTCACGAAGATCTGCAT 128407378 Score = 125 bits (138), Expect = 6e-24 Identities = 168/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 94774 TTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATA 94833 ||| || || || ||||| |||| |||||||||| ||| || || || || | ||| || Sbjct 128405783 TTAGACACCCCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTA 128405842 Query 94834 ATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATC 94893 || || ||| ||| ||||||||||| || ||||||| || || ||||| || Sbjct 128405843 GTCAGACAGGGTGCGTCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTC 128405902 Query 94894 TGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTG 94953 ||||| || ||||| ||||| | || ||||||||||| | | |||||| | Sbjct 128405903 AGGAGGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTCGG 128405962 Query 94954 GTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || | |||||||| || ||||| || || ||||| ||||||||||| Sbjct 128405963 CTCCACCTCGAGAGTGATGGTCTTACCAGTCAGGGTCTTCACGAAGATCTGCAT 128406016 Score = 125 bits (138), Expect = 6e-24 Identities = 171/237 (72%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || || ||||| | || | ||||| |||||| || || || || || | ||| | Sbjct 128406460 TTTGCATCCCACCTCTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGT 128406519 Query 94833 AATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTG 94890 | || || | || || ||| |||||||||||||| ||||||| || || ||||| Sbjct 128406520 AGTCAGACA--GGGTACGACCATCTTCCAGCTGTTTTCCAGCAAAGATCAACCTCTGCTG 128406577 Query 94891 ATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGC 94950 || ||||| || ||||| ||||| | || ||||||||||| ||| |||||| Sbjct 128406578 GTCAGGAGGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCACT 128406637 Query 94951 GTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | | || || || | |||||||| || ||||| || || ||||| ||||||||||| Sbjct 128406638 GGGCTCCACCTCGAGGGTGATGGTCTTACCAGTCAGGGTCTTCACGAAGATCTGCAT 128406694 Score = 123 bits (136), Expect = 2e-23 Identities = 121/156 (78%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| |||||||| ||||| ||||||| || || ||||| || |||||||| ||||| || Sbjct 128406311 ATCTTCCAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTT 128406370 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || ||||| |||||| ||| |||||| | | ||||| |||| ||||| Sbjct 128406371 GTCTTGGATCTTTGCTTTGACGTTCTCGATGGTGTCACTGGGCTCGACCTCAAGGGTGAT 128406430 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || ||||| || || ||||||||||| ||||| Sbjct 128406431 GGTCTTGCCAGTGAGTGTCTTCACAAAGATTTGCAT 128406466 Score = 120 bits (132), Expect = 3e-22 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || | ||||| ||||| ||||| || || || | ||| || || | Sbjct 128406696 CCACCTCTGAGACGGAGCACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAGTCAGAC 128406755 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | | || || ||| |||||||||||||| ||||||| || || ||||| || |||| Sbjct 128406756 A--GGGTACGACCATCTTCCAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGAG 128406813 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 | || || || ||||| | || ||||||||||| ||| |||||| | | || | Sbjct 128406814 GGATGCCCTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCCA 128406873 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | |||||||| || ||||| || || ||||| ||||||||||| Sbjct 128406874 CCTCGAGGGTGATGGTCTTACCAGTCAGGGTCTTCACGAAGATCTGCAT 128406922 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || | ||||| ||||| || || || || || | ||| || || | Sbjct 128408062 CCACCTCTGAGACGGAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 128408121 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| ||| |||||||||||||| ||||||| | || ||||| || ||||| Sbjct 128408122 AGGGTGCGCCCATCTTCCAGCTGTTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGG 128408181 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||| || || | || ||||||||||| ||| |||||| | | || || Sbjct 128408182 ATGCCTTCCTTATCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCAACC 128408241 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| || ||||| ||||| ||||| ||||||||||| Sbjct 128408242 TCGAGGGTGATGGTCTTACCAGTCAGAGTCTTCACGAAGATCTGCAT 128408288 Score = 111 bits (122), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 3/227 (1%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || | ||||| ||||| || || || || || | ||| || || | Sbjct 128406018 CCACCTCTGAGACGGAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 128406077 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| ||| |||||||| |||||| ||||||| || || ||||| || ||||| Sbjct 128406078 AGGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGG 128406137 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||| ||||| | || ||||||||||| ||| |||||| | ||| || Sbjct 128406138 ATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCA---TCGTCCACT 128406194 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | |||||||| || ||||| || || ||||| ||||||||||| Sbjct 128406195 CGGAGAGTGATGGTCTTACCAGTCAGGGTCTTCACGAAGATCTGCAT 128406241 Score = 100 bits (110), Expect = 3e-16 Identities = 114/152 (75%), Gaps = 1/152 (1%) Strand=Plus/Plus Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 |||||||||||||| ||| ||| || || ||||| || ||||| || ||||| || || Sbjct 128407682 TCCAGCTGTTTTCCAGCAA-GATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCT 128407740 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | || ||||||||||| ||| |||||| | | || || || | |||||||| Sbjct 128407741 TGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTC 128407800 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || || ||||| ||||||||||| Sbjct 128407801 TTACCAGTCAGGGTCTTCACGAAGATCTGCAT 128407832 Score = 87.8 bits (96), Expect = 2e-12 Identities = 163/235 (69%), Gaps = 6/235 (3%) Strand=Plus/Plus Query 94774 TTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGC-ACGTTAT 94832 ||| || ||||| ||||| || | ||||||| |||| || ||||| | | || || Sbjct 42378437 TTAGACACCTCCCCTCAAGTACAGAAACAAGTGCCAAGTGGA--CCTTTGGGGATGTCAT 42378494 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 | || || |||| ||| ||||| ||||| | | ||||||| || || ||||| | Sbjct 42378495 AGTCAG--ATGGTGTGCTCATCTTCCAGTTGTTT-CTGGCAAAGATCAACCTCTGCTGGT 42378551 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 | || ||| || || ||||| | ||| ||||||||||| | | |||||| | Sbjct 42378552 CAGGGAGAAGGCCATCCTTGTCTTGAATCTTTGCCTTGACATTCTCAATGGTGTCACTGG 42378611 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | | ||| |||| || ||||| || || || | || ||||||||| ||||||| Sbjct 42378612 GCTTGACCTCAAGGGTAATGGTCTTACCTGTCAAGGTGTTCACAAAGTTCTGCAT 42378666 >seq1283 Length=83181570 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||||| |||| |||| ||||| || || ||||| || | ||| || || Sbjct 38692345 CCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 38692286 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | |||| | ||| |||||||| || || ||||||| | || ||||| || ||||| Sbjct 38692285 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 38692226 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || |||||||| || | || || ||||| || ||| |||||| | | || || Sbjct 38692225 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACT 38692166 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| || ||||| || || ||||| ||||||||||| Sbjct 38692165 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 38692119 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||||| |||| |||| |||| || || ||||| || | ||| || || Sbjct 38692117 CCACCTCTCAGACGCAGGACCAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 38692058 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| |||||||| || || ||||||| | || ||||| || ||||| Sbjct 38692057 AGAGTACGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 38691998 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||| || || | || || ||||| || ||| |||||| | | || || Sbjct 38691997 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 38691938 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| |||||||| || || ||||| |||||||| ||||||||||| Sbjct 38691937 TCAAGGGTGATGGTCTTGCCGGTAAGGGTTTTCACGAAGATCTGCAT 38691891 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||||| |||| |||| |||| || || || || || | ||| || || Sbjct 34932436 CCACCTCTCAGACGCAGGACCAGATGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAA 34932495 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | | || | ||| |||||||| || || ||||||| | || ||||| || | ||| Sbjct 34932496 AGACTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCACGGGGA 34932555 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 | |||||||| || | ||||| |||||||| ||| |||| || | | || || Sbjct 34932556 TTGCCTTCTTTATCTTGGATTTTGGCCTTGACATTTTCGATAGTGGCACTGGGCTCCACT 34932615 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| |||||| | || || ||||| |||||||| ||||||||||| Sbjct 34932616 TCAAGGGTGATGATCTTGCCGGTAAGGGTTTTCACGAAGATCTGCAT 34932662 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || |||| |||| |||| ||||| || || || || || | ||| || || Sbjct 38692573 CCACCCCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAA 38692514 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | |||| | ||| |||||||| || || ||||||| | || ||||| || ||||| Sbjct 38692513 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 38692454 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || |||||||| || | || || ||||| || ||| |||||| | | || || Sbjct 38692453 ATGCCTTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 38692394 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| || || || || || ||||| ||||||||||| Sbjct 38692393 TCCAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 38692347 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/227 (69%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||||| |||| |||| ||||| || || ||||| || | ||| || || Sbjct 34932209 CCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 34932268 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| |||||||| || || ||||||| | || ||| ||| || ||| Sbjct 34932269 AGAGTACCGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCCGATGGGGGGGA 34932328 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 | |||||||| || | || || ||||| || ||| |||||| | | || || Sbjct 34932329 -TGCCTTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACT 34932387 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| || || || || || ||||| ||||||||||| Sbjct 34932388 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 34932434 >seq401 Length=166211670 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||||||||||||||| || |||| || | | |||||| || | ||||| || || || Sbjct 24856518 ATCCTCCAGCTGTTTGCCCGCAAATATCAGACGTTGCTGGTCAAGTGGAATGCCCTCCTT 24856577 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | |||||| |||||||| | |||||| | | ||||| || | ||||| Sbjct 24856578 GTCTTGAATTTTGGCCTTGACATTCTCAGTGGTGTCACTGGGCTCGACCTCGAGGGTGAT 24856637 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || || || || || ||||||||||||||||| Sbjct 24856638 GGTCTTGCCTGTGAGGGTCTTCACAAAGATCTGCAT 24856673 >seq866 Length=116767853 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 94794 GCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAAT 94853 ||| ||||| |||| || | | || || ||||| || || | |||| | || Sbjct 22524063 GCAGCACCAGGTGCGGGGTGGGCTGTTTCTGGACGTTGTAGTCTGAGAGAGTGCGGCCAT 22524004 Query 94854 CCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGT 94913 ||||||||||||| | | |||| || | | |||| || || || ||||| || |||| Sbjct 22524003 CCTCCAGCTGTTTGCTGGCAAATATCAGACGCTGCTTGTCAGGGGGGATACCCTCCTTGT 22523944 Query 94914 CATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGG 94973 | | |||||| || |||| | | |||||| | | ||||| |||| ||||||| Sbjct 22523943 CTTGAATTTTCGCACTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGG 22523884 Query 94974 TTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || || || ||||||||||||||||| Sbjct 22523883 TCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 22523850 >seq301 Length=175400573 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 94795 CAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATC 94854 |||||| | || | |||||| |||||||| | | || || || ||| ||| Sbjct 117183156 CAACACAAGATGAAGAGTAGACTCCTTTTGAATACTGTAGTCAGACAAAGTACATCCATC 117183097 Query 94855 CTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTC 94914 ||||| || ||||| ||||||| | |||||||||||| |||||||| ||||| || || Sbjct 117183096 TTCCAGTTGCTTTCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 117183037 Query 94915 ATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGT 94974 | || || ||||| || | | || || | | || | |||| |||||||| Sbjct 117183036 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCAAGGGTTCAGCCTCAAGGGTGATGGT 117182977 Query 94975 -TTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || |||| |||| |||||||| || |||||||| Sbjct 117182976 CTTCTCCA-TAAGGGTTTTCACGAAAATCTGCAT 117182944 >seq1061 Length=111190 Score = 87.8 bits (96), Expect = 2e-12 Identities = 163/235 (69%), Gaps = 6/235 (3%) Strand=Plus/Minus Query 94774 TTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGC-ACGTTAT 94832 ||| || ||||| ||||| || | ||||||| |||| || ||||| | | || || Sbjct 105480 TTAGACACCTCCCCTCAAGTACAGAAACAAGTGCCAAGTGGA--CCTTTGGGGATGTCAT 105423 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 | || || |||| ||| ||||| ||||| | | ||||||| || || ||||| | Sbjct 105422 AGTCAG--ATGGTGTGCTCATCTTCCAGTTGTTT-CTGGCAAAGATCAACCTCTGCTGGT 105366 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 | || ||| || || ||||| | ||| ||||||||||| | | |||||| | Sbjct 105365 CAGGGAGAAGGCCATCCTTGTCTTGAATCTTTGCCTTGACATTCTCAATGGTGTCACTGG 105306 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | | ||| |||| || ||||| || || || | || ||||||||| ||||||| Sbjct 105305 GCTTGACCTCAAGGGTAATGGTCTTACCTGTCAAGGTGTTCACAAAGTTCTGCAT 105251 >seq183 Length=202621043 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/216 (70%), Gaps = 7/216 (3%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851 |||| ||||| ||||| || || || || | | ||| | || | | || ||| | Sbjct 28070177 CGCAGCACCAGGTGCAGGGTGGACTCTTTCCGGATGTTGCAGTC--TGAGAGAGTTCGGC 28070120 Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 ||||||||||||||| || ||| || | ||||| || || || |||||| ||| Sbjct 28070119 CATCCTCCAGCTGTTTGCCAGCAAGTATCAGATGCTGCTGGTCAGGTGGGATACCTCCTT 28070060 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG-TCGACGTCAATCGTG 94969 ||| | |||||| || ||||| | | |||||| | ||| | |||||||| ||| Sbjct 28070059 -GTCTTGAATTTTGGCTTTGACATTCTCAATGGTGTCA-CTTGGCTTGACGTCAAGAGTG 28070002 Query 94970 ATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 ||||| || || || || || ||||||||||||||| Sbjct 28070001 ATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGC 28069966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448042123805640