Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20troglodytes_20[refseq_20GCF_5F000001515.7_202016-05-03] 44,449 sequences; 3,231,170,666 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq208 100 3e-16 >seq208 Length=194502333 Score = 100 bits (110), Expect = 3e-16 Identities = 165/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 138182 TACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATG 138241 ||| ||||| || || | ||||||||| || |||| || ||||| ||||| ||||| || Sbjct 73989626 TACTCCAATGGGCCCCATGCCAGGACCACCTCCTCTGTGGGGAATGCAGAAGGTCTTGTG 73989685 Query 138242 TAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGA--CCTACCTGT 138299 | |||||| || | ||||| | ||| |||| | || | ||| || ||||| Sbjct 73989686 AAGATTTAGGTGCGAGACATCAGACCCAAAGTCTCCAGGGC--GACAGATTCCCACCTGA 73989743 Query 138300 GCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACAT 138359 || || | |||||| | || || || |||| || |||| | ||| | || | ||| Sbjct 73989744 GCGTTCATATTTGCCCTGTCTAGGTAGACCTATCCTCCATGTTGATGGATGAGGTCACAC 73989803 Query 138360 ATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAAT 138415 | | |||||||| |||||| || |||| || ||||| ||||||||||| || Sbjct 73989804 ACGTCACTGATGTTCTCTTCAAACACCCCATTGGTGGATGGGTATGTAATCATGAT 73989859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578676701251480