Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20troglodytes_20[refseq_20GCF_5F000001515.7_202016-05-03] 44,449 sequences; 3,231,170,666 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1197 136 8e-27 seq1580 116 7e-21 seq1481 116 7e-21 seq1283 111 3e-19 seq301 109 1e-18 seq1091 98.7 2e-15 seq1056 98.7 2e-15 seq1395 96.9 7e-15 seq401 95.1 2e-14 seq148 91.5 3e-13 seq938 87.8 4e-12 seq793 86.0 1e-11 seq208 86.0 1e-11 seq1 84.2 4e-11 >seq1197 Length=81586097 Score = 136 bits (150), Expect = 8e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | ||||| ||| ||| || ||||| || |||| Sbjct 51799175 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATATTGTAGTCAG 51799233 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || || ||| |||| |||| || || ||||||||||| | |||||| |||||||| | Sbjct 51799234 ACAAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAG 51799293 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| ||||| || || || |||||||| ||| | ||| || | ||| | Sbjct 51799294 GAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAA 51799353 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 | || || || ||||| || || || | ||||| | || ||||||||||| Sbjct 51799354 CCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 51799405 >seq1580 Length=220409 Score = 116 bits (128), Expect = 7e-21 Identities = 152/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 192333 ATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATT 192391 ||| | ||||| ||| ||| || || || | ||||| || || ||| |||| |||| || Sbjct 148197 ATGAAGAGTAGGCTCCTTTTGA-ATGTTGCAGTCAGACAAAGTACGTCCATCTTCCAGTT 148255 Query 192392 GTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTT 192451 | || ||||||||||| | ||| || |||||||| || ||||| || ||||| || || | Sbjct 148256 GCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCCTCCTTATCCTGGATCT 148315 Query 192452 TATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAG 192511 | |||||||| ||| | |||||| | ||| || || || || ||||| || || Sbjct 148316 TGGCCTTTACATTTTCTATCGCATCTGAGGGTTCAACCTCAAGGGTGATGGTCTTCCCCC 148375 Query 192512 TTAATGTTTTAATAAATATCTGCATTTT 192539 ||| ||||| | || ||||||| ||| Sbjct 148376 TTAGGGTTTTCACGAAAATCTGCAGTTT 148403 >seq1481 Length=155549662 Score = 116 bits (128), Expect = 7e-21 Identities = 152/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 192333 ATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATT 192391 ||| | ||||| ||| ||| || || || | ||||| || || ||| |||| |||| || Sbjct 3586166 ATGAAGAGTAGGCTCCTTTTGA-ATGTTGCAGTCAGACAAAGTACGTCCATCTTCCAGTT 3586108 Query 192392 GTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTT 192451 | || ||||||||||| | ||| || |||||||| || ||||| || ||||| || || | Sbjct 3586107 GCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCCTCCTTATCCTGGATCT 3586048 Query 192452 TATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAG 192511 | |||||||| ||| | |||||| | ||| || || || || ||||| || || Sbjct 3586047 TGGCCTTTACATTTTCTATCGCATCTGAGGGTTCAACCTCAAGGGTGATGGTCTTCCCCC 3585988 Query 192512 TTAATGTTTTAATAAATATCTGCATTTT 192539 ||| ||||| | || ||||||| ||| Sbjct 3585987 TTAGGGTTTTCACGAAAATCTGCAGTTT 3585960 >seq1283 Length=83181570 Score = 111 bits (122), Expect = 3e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||| | || | || || ||||| | ||||| |||||| ||||| || |||| Sbjct 46388121 ACCACCACGCAGTCTCAACACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGCCAGA 46388180 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || || | | |||| |||| ||| || ||||||||||| ||| || |||||||| || Sbjct 46388181 CAAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGG 46388240 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 |||||||| ||||| || || || |||||||| ||| | ||| ||| ||| || Sbjct 46388241 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCAACGGTTCAAC 46388300 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 | || || | || || || || | ||||| | || ||||||||||| Sbjct 46388301 CTTGAGGGTGGTTGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 46388351 Score = 87.8 bits (96), Expect = 4e-12 Identities = 159/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| ||||| | || | ||| | || | |||||| ||| || || ||| Sbjct 34932433 ATACCACCTCTCAGACGCAGGACCAGATGCAGGGTCGACTCTTTCTGGATGTTGTAGTCA 34932492 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | | || |||| |||| || || || |||||||| | ||||| || ||| | Sbjct 34932493 GAAAGACTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCACGG 34932552 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || | |||||||||||||| ||||| || ||||| |||| | | || Sbjct 34932553 GGATTGCCTTCTTTATCTTGGATTTTGGCCTTGACATTTTCGATAGTGGCACTGGGCTCC 34932612 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||||| || || ||| | || || || | ||||| | || ||||||||||| Sbjct 34932613 ACTTCAAGGGTGATGATCTTGCCGGTAAGGGTTTTCACGAAGATCTGCATTTT 34932665 >seq301 Length=175400573 Score = 109 bits (120), Expect = 1e-18 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | ||||| ||| ||| || ||| | || |||| Sbjct 117183171 ACCACCACGAAGCCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATACTGTAGTCAG 117183113 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || || | | |||| |||| ||| || ||||||||||| | ||| || |||||||| | Sbjct 117183112 ACAAAGTACATCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGTCTTTGCTGATCAGGAG 117183053 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| ||||| || || || |||||||| ||| | ||| | | ||| Sbjct 117183052 GAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCAAGGGTTCAG 117182993 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 | || || || ||||| || | | | ||||| | || ||||||||||| Sbjct 117182992 CCTCAAGGGTGATGGTCTTCTCCATAAGGGTTTTCACGAAAATCTGCATTTT 117182941 Score = 84.2 bits (92), Expect = 4e-11 Identities = 221/311 (71%), Gaps = 25/311 (8%) Strand=Plus/Plus Query 214256 atgata-attatataaatata-aatccattaataagaa-ata-aactatcgatatatatt 214311 |||||| | |||||||||||| ||| ||| ||| | ||| || ||| ||||||| | Sbjct 116995285 ATGATATAATATATAAATATATAATACATGCATATTAGTATATAATTATAAATATATACT 116995344 Query 214312 ataacatctagtatatgtaatataataga-tatatta-ttattttctacaaatcaatatc 214369 ||| ||| || ||| | || ||||||||| |||| || |||| || | || |||| | Sbjct 116995345 ATA-CATATATTATGTATA-TATAATAGAATATAATAATTATAAAATATATATTAATA-C 116995401 Query 214370 atataatattttttCAAACCTACGAAGATGAAAAATTAT--TTATaaaaaaaTATGGTAA 214427 ||||| |||| | || | || | | || | || ||| | ||||| | |||| || Sbjct 116995402 ATATA-TATTAATGCATATATATGTAAATAATAATATATAATAATAAATAGATATATTA- 116995459 Query 214428 ATCGAGACACAGTAATAATGCTATTTATTGTGGTGTAATAAA-AAATATTTCAGATAATA 214486 || | | | | |||||||| | |||| || | ||||| | |||||| | |||||||| Sbjct 116995460 -TC-ATATATATTAATAATG---TATATTATGATATAATATATAAATATATAAGATAATA 116995514 Query 214487 TAATAACAGCATGGAAGTAAT-TTGaaaaaatattata-attatattatata-attacta 214543 ||| || | || | |||| | | | |||||||| |||||||| |||| |||| || Sbjct 116995515 TAA-AATAATATACTATTAATATATATTACATATTATATATTATATTTTATATATTA-TA 116995572 Query 214544 taa-atataat 214553 ||| ||||||| Sbjct 116995573 TAATATATAAT 116995583 >seq1091 Length=100452976 Score = 98.7 bits (108), Expect = 2e-15 Identities = 367/553 (66%), Gaps = 54/553 (10%) Strand=Plus/Plus Query 182991 atatagcatatttatatt-aataat-atcatttgtcgtatcattataatataaataaatt 183048 ||||| |||| |||||| |||||| || || | | || ||||||||||| || || | Sbjct 73496685 ATATATTATATATATATTTAATAATTATAATATTTAATA--ATTATAATATATATTAAAT 73496742 Query 183049 atatttttatcta-----atatgtctt-tattata----atag-ttagataaaaataatg 183097 ||||| | || || |||| | || ||||||| ||| ||| ||| || |||| Sbjct 73496743 ATATTATAATATATTATAATATATTTTATATTATATATTATATATTATATATAA-TAATA 73496801 Query 183098 tata-tgcataatctattattattttttgagataatctatttaaattatatttattttcc 183156 |||| | ||||| |||||||||| || | ||||| ||| | | |||||| | | Sbjct 73496802 TATAATATATAATATATTATTATTATTATATATAATATATATTATATATATTATTATATA 73496861 Query 183157 cagtttgataga-ttatatg--tagattttatataatcatatattatatcatatttaact 183213 | | | ||| | |||||| || || ||||||| | |||| ||||| ||| || | | Sbjct 73496862 TATTATTATATAATTATATAATTATATATTATATATTATTATAATATATAATAATTTAAT 73496921 Query 183214 gaattcgttattaatttggttaaaaaatatgttattatatt---attatggtaattttca 183270 ||| ||||| |||| |||||| | || ||||| ||||| |||| | | Sbjct 73496922 ATATTATATATTA------TTAATAAATATATAATAATATTTATATTATTATAATAT--A 73496973 Query 183271 ttattatttaggata-attctaaattnnNNNNNNNAATAACCATATTTTATATATCTTTT 183329 | || || || ||| ||| || ||| |||| |||| |||||||| Sbjct 73496974 TAATAATATATTATATATTATATATTATTATAATATATAATAATATATTATATATA---- 73497029 Query 183330 GAATAAATTAAACAAAAAATTCATTTTATTAGACCTTAGAATATTAA-TATATTTTTTAA 183388 |||| || ||| | ||| | | ||||| | ||| ||||| || |||||||||||| Sbjct 73497030 -AATATATAAAATATGTAAT--AATATATTATATATTATAATATAAAATATATTTTTTAA 73497086 Query 183389 TAGTAATGTAATATGCCATATCCTCAACtttatatacgtagatatcatttattattttat 183448 | || |||||| ||| | | ||||||| ||| || || ||| |||| Sbjct 73497087 T----ATATAATAT-ATTTATAATATAAAATATATAC---TATAATATATAATATATTAT 73497138 Query 183449 ttat-atattcgttatctgtatcatattctaataatat-ttttttatat--GAAT-TATT 183503 ||| |||| ||||| | | |||| | ||||||| | || ||||| ||| ||| Sbjct 73497139 ATATAATATATGTTATATATTATATATAAT-ATAATATGTATTATATATTATAATATATA 73497197 Query 183504 CATATTATATATA 183516 |||||||||||| Sbjct 73497198 AATATTATATATA 73497210 >seq1056 Length=137163284 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 192328 ACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCC 192387 || || || | ||| | |||||| ||| || || ||||| | || ||| |||| ||| Sbjct 128405808 ACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCTTCC 128405867 Query 192388 AATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGT 192447 | ||||| ||||||||||| || ||||| || ||||| || || ||||| || ||||| Sbjct 128405868 AGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGG 128405927 Query 192448 ATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 192507 || || || ||||| || | || || || || || ||||| ||||| ||| Sbjct 128405928 ATCTTTGCCTTGACATTCTCAATGGTGTCACTCGGCTCCACCTCGAGAGTGATGGTCTTA 128405987 Query 192508 CCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || || | || |||||||| Sbjct 128405988 CCAGTCAGGGTCTTCACGAAGATCTGCAT 128406016 Score = 96.9 bits (106), Expect = 7e-15 Identities = 167/243 (69%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| ||||| | || | || | || | |||||| ||| || || ||| Sbjct 128408059 ATCCCACCTCTGAGACGGAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCA 128408118 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||| ||||| ||||||||||| | ||||| || ||||| Sbjct 128408119 GACAGGGTGCGCCCATCTTCCAGCTGTTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGA 128408178 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| |||||||| || || || ||||| || | || | || Sbjct 128408179 GGGATGCCTTCCTTATCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCA 128408238 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTATTAGAA 192546 || || || || ||||| |||||||| | || || | || ||||||||| | | | || Sbjct 128408239 ACCTCGAGGGTGATGGTCTTACCAGTCAGAGTCTTCACGAAGATCTGCATTGTCTAACAA 128408298 Query 192547 AAA 192549 ||| Sbjct 128408299 AAA 128408301 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| ||||| | || | || || || | |||||| ||| || || ||| Sbjct 128406465 ATCCCACCTCTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCA 128406524 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||| ||||| ||||||||||| || ||||| || ||||| Sbjct 128406525 GACAGGGTACGACCATCTTCCAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGA 128406584 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| || || || ||||| || | || | || Sbjct 128406585 GGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCC 128406644 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||| |||||||| | || || | || |||||||| Sbjct 128406645 ACCTCGAGGGTGATGGTCTTACCAGTCAGGGTCTTCACGAAGATCTGCAT 128406694 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| ||||| | || | || | |||| |||||| ||| || || ||| Sbjct 128407831 ATCCCACCTCTGAGACGGAGCACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAGTCA 128407890 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||| || || ||||||||||| || ||||| || ||||| Sbjct 128407891 GACAGGGTGCGCCCATCTTCCAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGA 128407950 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| || || ||| || || || | || | || Sbjct 128407951 GGAATGCCTTCCTTGTCTTGGATCTTTGCTTTGACGTTCTCGATGGTGTCACTGGGCTCG 128408010 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || |||||||| ||||| | ||| || | || |||||||| Sbjct 128408011 ACCTCAAGGGTGATGGTTTTGCCAGTGAGTGTCTTCACGAAGATCTGCAT 128408060 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| ||||| | || | || | |||| |||||| ||| || || ||| Sbjct 128406693 ATCCCACCTCTGAGACGGAGCACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAGTCA 128406752 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||| ||||| ||||||||||| || ||||| || ||||| Sbjct 128406753 GACAGGGTACGACCATCTTCCAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGA 128406812 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || ||||| || || || ||||| || | || | || Sbjct 128406813 GGGATGCCCTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCC 128406872 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||| |||||||| | || || | || |||||||| Sbjct 128406873 ACCTCGAGGGTGATGGTCTTACCAGTCAGGGTCTTCACGAAGATCTGCAT 128406922 >seq1395 Length=66533130 Score = 96.9 bits (106), Expect = 7e-15 Identities = 163/232 (70%), Gaps = 3/232 (1%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | ||||| ||| ||| || || || || |||| Sbjct 17484951 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATGTTGTAGTCAG 17484893 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || | | |||| |||| || || | ||||||||| | ||| | |||||||| | Sbjct 17484892 ACAAAACACATCCATCCTCCAGTTCTTG-CTAGCAAAGATCAGTCTTTACTGATCAGGAG 17484834 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| ||||| || | || |||| ||| ||| | ||| || | ||| | Sbjct 17484833 GAATTCCTTCCTTATCCTGGGTCTTGGCCTTTATATTTTCTATCGTATCCGAGGGTTCAA 17484774 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 | || || || ||||| || || || | ||||| | ||| ||||||||||| Sbjct 17484773 CCTCGAGGGTGATGGTCTTCCCTGTGAGGGTTTTCACAAAAATCTGCATTTT 17484722 >seq401 Length=166211670 Score = 95.1 bits (104), Expect = 2e-14 Identities = 163/232 (70%), Gaps = 5/232 (2%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | |||| ||| ||| || || || || |||| Sbjct 161377047 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAAGCTCCTTTTGA-ATGTTGTAGTCAG 161376989 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | | || | | |||| |||| ||| || ||||||||||| | ||| || |||||||| | Sbjct 161376988 ACA--GTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAG 161376931 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| ||||| || || || |||||||| ||| ||| | | ||| | Sbjct 161376930 GAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCATATCCAAGGGTTCAA 161376871 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 | | || || ||||| || || | | ||||| || | ||||||||||| Sbjct 161376870 CCTTGAGGGTGATGGTCTT-CCCCTAAGGGTTTTTATGGAAATCTGCATTTT 161376820 Score = 93.3 bits (102), Expect = 8e-14 Identities = 286/418 (68%), Gaps = 41/418 (10%) Strand=Plus/Minus Query 24851 ATATATTGAATAAAATAACTATAAAATACATCGCCTGTACTTGTATTAAAATCTTCGtta 24910 ||||||| | || |||| |||||||||||| | || | | || || | || Sbjct 75680634 ATATATTTA-TATTATAAATATAAAATACAT---TTATATTATAAATATAAAACACATTT 75680579 Query 24911 atttttcaaataatttaatatcacatatattatttttaaataattataagaataatttaa 24970 || ||| | |||| ||| | ||| | ||| ||| ||| |||| | |||| || Sbjct 75680578 ATATTT--ATTAATATAA----AAATAAAATATATTT--ATATTTATTAATATAA-ATAT 75680528 Query 24971 aaatgtatttaccatca-tcatataaattataaatataattataacaatcgaagtttata 25029 |||| |||||| | | | ||||||| |||||||||| ||||| || | | ||| Sbjct 75680527 AAATATATTTATATTTATTAATATAAA-TATAAATATATTTATATTTATTAATATAAATA 75680469 Query 25030 ttctccattatttttatattttttcaaataaattactatataatttagttatttttatat 25089 | | ||| ||||||||| || | ||||| |||| ||| || |||| || ||| Sbjct 75680468 T----AAATATATTTATATTTATTAATATAAA----TATA-AATATATTTATATT--TAT 75680420 Query 25090 taactaccagtatatatttaactatatttataaaaataatactgtgatgatatattataa 25149 ||| || | |||| || || ||||||||| || ||| | | | | |||| ||||| Sbjct 75680419 TAA-TATAAATATAAATATATTTATATTTATTAATATA--AATATAAATATAT-TTATAT 75680364 Query 25150 taattaatattaatggaaatat-tttat----tttta-taaaataaaaat-aacagatat 25202 | |||||||| ||| |||||| ||||| ||||| ||| ||||| || || | || | Sbjct 75680363 TTATTAATATAAATATAAATATATTTATATAGTTTTATTAATATAAATATAAATATATTT 75680304 Query 25203 a-attgataaatccatttaaa-agaagatatattaatata-ttttatTAAAAGTAAAT 25257 | || | | || || |||| | || ||||||| ||||| ||||||||| | ||||| Sbjct 75680303 ATATAGTTTTATTAATATAAATATAAAATATATTTATATAGTTTTATTAATA-TAAAT 75680247 >seq148 Length=133216015 Score = 91.5 bits (100), Expect = 3e-13 Identities = 116/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439 |||| |||| ||| || |||||||||| | ||| || | | |||| | ||||||| | Sbjct 115230987 CATCTTCCAGTTGCTTGTCAGCAAAGATAAGTCTTTGCTAACCAGGAAGATTTCCTTCCT 115230928 Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499 |||| || || || |||||||| ||| | |||||| | ||| || || || || | Sbjct 115230927 TATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAAGTTTCAACCTCCAGGGTGA 115230868 Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 |||| || | || | ||||| ||||| ||||||||||| Sbjct 115230867 TGGTCTTCTCTGTAAGAGTTTTTATAAAAATCTGCATTTT 115230828 >seq938 Length=135926727 Score = 87.8 bits (96), Expect = 4e-12 Identities = 213/306 (70%), Gaps = 25/306 (8%) Strand=Plus/Plus Query 253517 ataaaatatatagatataaatgtatataataaagt-tattgaaacatctaggataataaa 253575 ||| |||||||| |||||||| ||||||||||| | ||| || || |||||| | Sbjct 113046576 ATATAATATATA-ATATAAATATATATAATAAAATATAT---AATAT-----ATAATATA 113046626 Query 253576 aa-atTTAGCA-ATAGATTTAGATTTTGAATATTTTAAATATATATCTAATAATGCAAAT 253633 || || || | ||| || || ||| | ||| | ||||||||||| || || | || Sbjct 113046627 AATATATATAATATAAATATATATTATATATAATATAAATATATATATATAAACATATAT 113046686 Query 253634 TTTTTATTTAGAGACAATACATTATTTTTAGTACGAAGAAAAGATTttataggttataaa 253693 | | ||| || | | |||| |||| | | || | || |||| ||||| | ||| | Sbjct 113046687 TATATATATA-AAATAATATATTAATAT--ATAATATAAATAGATATTATATATAATATA 113046743 Query 253694 aatag-caatatatcgattataaatggtaaattattat-tat-ataaaaatatat-taat 253749 ||||| | ||||| | |||||| || |||||||| ||| ||| ||||| || |||| Sbjct 113046744 AATAGATATTATATATAATATAAA---TATATTATTATATATAATATAAATAGATATAAT 113046800 Query 253750 aataactgattatgtggacaataatgaatattTTGGAAATTATATAATTATaaaaaaaCA 253809 | || ||| | | | |||||| |||||| | | | ||||||| |||||| | | | Sbjct 113046801 ATAAATAGATATTATATATAATAATAAATATTAT--ATAATATATAA-TATAAATATATA 113046857 Query 253810 TTATAT 253815 | |||| Sbjct 113046858 TAATAT 113046863 >seq793 Length=147911612 Score = 86.0 bits (94), Expect = 1e-11 Identities = 325/485 (67%), Gaps = 54/485 (11%) Strand=Plus/Minus Query 24781 TATATATAAAATTTACTTAAA----AACTAAGAATGTATGATGATTAATGAAGATTATTG 24836 |||||||||||| || ||| | | ||| || || || || || || || Sbjct 32946783 TATATATAAAATATATTTATATATTATATAAATATATAAAATATATATAAAATATGTTTA 32946724 Query 24837 TATCAAATCCAATCATATATTGAATAAAATAACTATAAAATACATCGCCTGTACTTGTAT 24896 ||| || ||| |||||| |||||||| ||||||||| || | || || ||| Sbjct 32946723 TATATTATACAAATATATAT---ATAAAATATATATAAAATATAT-TTATATA-TTATAT 32946669 Query 24897 TAAAATCTTCGttaatttttcaaata--atttaatatcacatatattat--ttttaaata 24952 || || | |||| | | ||| || || ||| ||||||||| | | ||||| Sbjct 32946668 GAATATAT---ATAATATAAAATATATTATATATTATATAATATATTATTATATAAAATA 32946612 Query 24953 attataagaataatttaaaaatgtatttaccatcatcatataaattataaatataat--t 25010 |||| ||||| || |||| |||| || || | ||| ||| || ||||||| | Sbjct 32946611 TTTAT----ATAATATATAAATATATT--ATAT-ATAAAATATATT-TATATATAATAAT 32946560 Query 25011 ataacaatcgaagtttatattctccattatttttatattttttcaaataaattactatat 25070 |||| ||| | | | |||| | | | ||| ||||||| ||| ||||| || ||||| Sbjct 32946559 ATAATAAT-GTATTATATA-TATAAAATATATTTATATATTTATAAATA---TATTATAT 32946505 Query 25071 aatttagttatttttatattaacta--ccagtatatatttaactatatttataaaaataa 25128 ||| || ||| ||||||||| || | ||||||| ||| ||||| ||| | |||| Sbjct 32946504 AATATAAGTATATTTATATTATATAATATATTATATATATAAATATATATATTATTATAA 32946445 Query 25129 tactgtgatgatatattataata-att--aatatta-atggaaatat-tttatttttata 25183 || | | || |||||| | |||| ||| |||||| || ||||| || || | |||| Sbjct 32946444 TA-TATAAT-ATATATAAAAATATATTTACATATTATAT---AATATATTAATATATATA 32946390 Query 25184 aaataaaaataacagatataattgataaatccatttaaaagaagatatattaatatattt 25243 |||| ||| | |||| || ||| || || || || |||||| ||||||||| Sbjct 32946389 AAAT----ATATTACATATTAT--ATA-----ATATATAAAAATATATATAAATATATTT 32946341 Query 25244 tatTA 25248 |||| Sbjct 32946340 AATTA 32946336 >seq208 Length=194502333 Score = 86.0 bits (94), Expect = 1e-11 Identities = 368/545 (68%), Gaps = 69/545 (13%) Strand=Plus/Plus Query 182991 atatagcatatttatatta-ataatatcatttgtcgtatcat-tataatataaataaatt 183048 ||||| ||||| |||||| ||| ||| || | | ||| || |||||||||| || ||| Sbjct 46724772 ATATATTATATT-ATATTATATATTATGATATATTATATTATATATAATATAA-TATATT 46724829 Query 183049 atatttttatctaatatgtctttattataatagttagataaaaataatgtatatgc-ata 183107 |||| || | |||| | || ||||||| | || | ||||| ||||| ||| Sbjct 46724830 ATAT----ATATTATAT---TATAATATAATATAT---TATATATAATATATATAATATA 46724879 Query 183108 atctattattattttttgagataatctatttaaattatatttattttcccagtttgatag 183167 || |||||| || || | | ||||| |||| | |||||| | || || | Sbjct 46724880 ATATATTAT-ATATTATAATATAATATATT-ATATTATAAT-ATATT-----------AT 46724925 Query 183168 attatatgtagatt-ttatataatcatatattatatcatatttaactgaattcgttatta 183226 ||||||| || ||| |||||| || ||||||||||| || || | ||| ||||| Sbjct 46724926 ATTATAT-TATATTATTATATTATAATATATTATATGAT---TATATTAATAATATATTA 46724981 Query 183227 att---tggttaaaaaatatgttat--tatattattatggta-attttcattat--tatt 183278 ||| | ||| | |||| |||| ||||||||||| || || || ||||| |||| Sbjct 46724982 ATTGTATTATTATATTATATATTATATTATATTATTATATTATATATTAATTATATTATT 46725041 Query 183279 taggataat-tctaaattnnNNNNNNNAATAACCATATTTTA-TATA-TCTTTTGAATAA 183335 || ||||| | || ||| ||| ||||| || |||| | ||| | || Sbjct 46725042 TAT-ATAATATTTATATT----------ATATATATATTATAATATAATATTTATATTAT 46725090 Query 183336 ATTAAACAAAAAATTCATTTTATTAGACCTTAGAATATTAATATATTTTTTAATAG-TAA 183394 ||||| | || ||| || |||||| | ||| ||||| |||||||| | || || ||| Sbjct 46725091 ATTAAT-ATAATATTTATATTATTATA--TTATAATAT-AATATATTATATATTATATAA 46725146 Query 183395 TGTAATATGCCATATCCTCAACttta-tatacgtagat-atcatt-tattattttattta 183451 || ||| |||| | | | || |||| || || || ||| || ||| |||| Sbjct 46725147 AATATTATAT-ATATATTATAATATACTATAT-TATATTATTATTATAATATAATATTAT 46725204 Query 183452 tatattcgttatctgtatcatattctaataatatttttttatatGA-ATTATTCATATTA 183510 |||||| | || | || ||| | |||||||| | ||||| | |||||| |||||| Sbjct 46725205 TATATTAGA-ATATATAATATAATAATATAATATTAATATATATTATATTATT-ATATTA 46725262 Query 183511 TATAT 183515 ||||| Sbjct 46725263 TATAT 46725267 >seq1 Length=228573443 Score = 84.2 bits (92), Expect = 4e-11 Identities = 366/549 (67%), Gaps = 46/549 (8%) Strand=Plus/Minus Query 182991 atatagcatatttatattaataatatcatttgtcgtatc-attataatataaataa---- 183045 ||||| |||| | ||||| ||||||| | | ||| ||| || |||| ||| Sbjct 87217487 ATATATTATATATTTATTATACATATCATATATTATATATATTTTATTATACATATTATA 87217428 Query 183046 -attatat-ttttatctaatatg-tctttattataatag-ttagataaaaataatgtata 183101 ||||||| ||||||| |||| | | || |||| || ||| ||| | | || |||| Sbjct 87217427 TATTATATATTTTATCATATATTATATATAATATATTATATTATATATATTTTAT-TATA 87217369 Query 183102 tgcataatctattat--tattttttgagataatctatt-taaattatatt---tattttc 183155 | || || |||||| ||| | || | ||||| |||| || ||||||| ||| || Sbjct 87217368 TATATTATATATTATATTATATATT-ATATAATTTATTATATATTATATAATATATATTT 87217310 Query 183156 ccagtttgatagattatatgtagattttatataatcatatattatatcatatttaactga 183215 | | ||| ||||||| || ||||||| ||||| ||| |||| | | | Sbjct 87217309 ----TATTATATATTATATTATTATATTATATATATATATAAATTATTATATATTATATA 87217254 Query 183216 attcgttattaatttggttaaaaaatatgttattatattattatggtaattttcattat- 183274 ||| | | | || || ||| || |||| |||||||| |||||| |||||| ||||| Sbjct 87217253 ATT--TAAATTATATGATTATAATATATATTATTATAATATTATA-TAATTT--ATTATA 87217199 Query 183275 tatttaggataat-tctaaattnnNNNNNNNAATAACCATATTTTATATATCTTTTGAAT 183333 ||| || |||| | || || |||| |||||| ||||| | | ||| Sbjct 87217198 TATCTAT--TAATATATATTTTATATATAATAATAT--ATATTTATTATATAATAT-AAT 87217144 Query 183334 AAATTAAACAAAAAATTCATTTTATTAGACCTTAGAATATTAATATATTTT-TTA-ATAG 183391 | ||| | | | | | | ||||||| ||| ||||| ||||||||| ||| ||| Sbjct 87217143 ATATTTATTATATATTATAATTTATTA----TTATTATATTTATATATTTTATTATATAT 87217088 Query 183392 TAATGT-AATATGCCATATCCTCAACtttatatacgt-agatatcatttattattttatt 183449 |||| | ||||| |||| | | ||| |||| | | |||| |||||| || ||||| Sbjct 87217087 TAATATTAATATTATATATTATATATTTTTTATATATTATATAT-ATTTAT-ATATTATT 87217030 Query 183450 -tatatattcgttatctgtatcatat-tctaataatatttttttatatGAATTATTCATA 183507 |||||||| | | | ||| |||| | | || ||| | || |||| ||| | ||| Sbjct 87217029 ATATATATTTCTATTATATATTATATATATTTTATTATATATT-ATATATATTTTATATA 87216971 Query 183508 TTATATATA 183516 ||||||||| Sbjct 87216970 TTATATATA 87216962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 983919335871150