Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20troglodytes_20[refseq_20GCF_5F000001515.7_202016-05-03] 44,449 sequences; 3,231,170,666 total letters Query= NC_022563.1 Length=148803 Score E Sequences producing significant alignments: (Bits) Value seq1283 86.0 6e-12 >seq1283 Length=83181570 Score = 86.0 bits (94), Expect = 6e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 43867 TCCGCTGGAAGGTGCCGTCGAGGGCGGCCACGATGACGATCTTCCCCGCGTTCGCCATGT 43926 ||| ||||||||| || || || || ||||| || ||| ||||||| ||||| |||||| Sbjct 77781113 TCCTCTGGAAGGTCCCATCCAGTGCAGCCACAATTACGGTCTTCCCGGCGTTGGCCATGG 77781172 Query 43927 CCTCGCAGAACTCCACTAGGTC 43948 |||||||||||||||| | ||| Sbjct 77781173 CCTCGCAGAACTCCACGATGTC 77781194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475777105336520