Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq21 311 1e-79 seq8 116 4e-21 seq14 114 2e-20 seq13 104 3e-17 seq12 104 3e-17 SEQ44210 95.1 1e-14 seq19 95.1 1e-14 seq9 93.3 5e-14 >seq21 Length=143691637 Score = 311 bits (344), Expect = 1e-79 Identities = 635/938 (68%), Gaps = 24/938 (3%) Strand=Plus/Plus Query 23788 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 23844 |||| |||||| |||| || | |||| ||| ||| | || |||| |||||||| Sbjct 41472621 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGATTCGACACCACTCCCATCC 41472680 Query 23845 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 23904 | || || || || | || || || || || || || | | ||| ||||| | Sbjct 41472681 TCTGATACTCCTTTACTCTCTTCTCAAAGAAGTTCGTCTTTC-----AGTGAAATATTCT 41472735 Query 23905 CCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATCA 23964 |||| || || |||| || || | | | | |||| |||| ||| | || Sbjct 41472736 CCATAAAGTCAAATGGGTTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCGGCATG- 41472794 Query 23965 ATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 24024 ||| ||||| ||| |||| || ||| ||||| | |||||||| || || || | Sbjct 41472795 -TCTGTCTGCCACAGACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 41472853 Query 24025 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 24084 | || || | ||| |||| || ||||| ||||| || | || || | | || | Sbjct 41472854 TCACAGGCAAGGCCTCAGTGAGGAATTCCTGTTCTATCCAAACAGCATTGATAATTCTTT 41472913 Query 24085 ATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 24144 ||||| | | || || ||| | | | || || ||||||| || || |||| Sbjct 41472914 CTCTTATTCTCTCCTCCAATGGTTTGTGTACCAGGTGATTGAACATCAGGCAGGCAAAAT 41472973 Query 24145 CGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 24204 | ||||||| |||||| |||| |||||| | ||| |||||||| ||||| || ||||| | Sbjct 41472974 CACAGTGTAAACCCTCATCTCCACTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCATCA 41473033 Query 24205 GGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTA 24264 | || || || || ||||| ||||| || ||||| | |||||||||| | ||||| Sbjct 41473034 GTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAAGA---TGCCTTCCG 41473090 Query 24265 CTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTCATGTATCCACTTTT 24321 |||| |||||| | | || | ||| ||||| | | || |||| ||||| | Sbjct 41473091 CTGCAGCAAAGACTACAACACGTTCCCCATAGGTAGCTGCTTTGTCCCCAATCCAGTGCA 41473150 Query 24322 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGt 24381 |||||||| |||||||| || ||||||||||| || || || ||||| ||| || | | Sbjct 41473151 AGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGCGAAATT 41473210 Query 24382 ttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAA 24441 |||| || |||||| | || || ||||| | | |||||||||| | ||||| | Sbjct 41473211 CCCTTTCTTTGGGATCTTTTATGTAAGTGTCAATAAGGAAACTATACATTCCAGAATGTA 41473270 Query 24442 TGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTA 24501 ||||||| ||||| ||||| || || ||||||| | || || || | ||| |||||| Sbjct 41473271 TGTTTTCCATGGCAATTTGGAAGCCACAGAAACAGCGGGCTTCTGTCACCTGAACTTCTT 41473330 Query 24502 TACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCA 24561 | ||||| || | || ||| |||| ||||| || ||||| ||| |||| || ||| Sbjct 41473331 GGCTAAATCACTCCACCAAGTTTGCATTTACTATGCCATCACTTGCTACAAAGAAAACCA 41473390 Query 24562 ATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG----ATA 24617 ||||| |||||||| | | || || || | || ||||| || || || Sbjct 41473391 GAACATGGGATATAAAATCTCTCTCCTCGGGCTTCAG-GGATTCC---CAGTGCCAAATG 41473446 Query 24618 TCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATA 24677 || || || | ||||| || ||| | ||||| || || || || ||||| |||||||| Sbjct 41473447 TCCTTGGACAGGTCCACCTCCTCCGCGGTCCAGAAGGAAGCTTCCGCCTTCTTATACATC 41473506 Query 24678 TTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715 | |||||| ||||| || | | || || || ||||| Sbjct 41473507 TGCCAGATATCATGGTACTCGGTGGGGAAGATGACAAA 41473544 Score = 197 bits (218), Expect = 2e-45 Identities = 317/450 (70%), Gaps = 8/450 (2%) Strand=Plus/Minus Query 24147 CAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGG 24206 ||||||| |||||| || || ||||| | ||| |||||||| ||||| || ||||| || Sbjct 132680207 CAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGT 132680148 Query 24207 CCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACT 24266 || | || | ||||| ||||| ||||| || ||||||||||| | | ||| ||| Sbjct 132680147 CCTTGTTTCCTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGAAGGTGCTTTCCACT 132680088 Query 24267 GCCGCAAAGGCAATAAGTCTTTCTCCAT---AACCGGCGCTGTCATGTATCC-ACTTTTG 24322 |||||||| || | |||||||| | | | ||| |||| || | Sbjct 132680087 AGGGCAAAGGCTGCAACACGTTCTCCATGGGTAACATCTTTGTTCCCAATCCAACACAAG 132680028 Query 24323 AGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtt 24382 | ||||| | |||||||| || |||| ||||||||| | || ||||| |||||| | | Sbjct 132680027 A-CCCAAACTGCCTTCTTCTTGACAC-AGGCATTGTTCCAATGGCATTGAAGAGAAATTC 132679970 Query 24383 tttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAAT 24442 |||| || |||||||| || ||| ||||| | ||||||| || || ||||| || Sbjct 132679969 CCTTTCTTTGTTATCTTTA--ATGTGTGTCAATAAGGAGACTATTTATGTCAGAATGTAT 132679912 Query 24443 GTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTAT 24502 |||||| | || ||||| || || ||||| || | || |||||||| | |||| Sbjct 132679911 GTTTTCTGTAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTCTGTAATCTGAATTTCTTG 132679852 Query 24503 ACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAA 24562 | |||| |||| | || ||||||| ||||| || |||| |||||||| || |||| Sbjct 132679851 AACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATGCTGCAAAGAAAGCCAG 132679792 Query 24563 TACATGTTTTATAAAATATTTTTCGTCTGG 24592 | || |||||||||| |||| || || Sbjct 132679791 AATATAGGATATAAAATATCTTTCCTCAGG 132679762 >seq8 Length=140346614 Score = 116 bits (128), Expect = 4e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 24159 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 24218 || ||||| || || | ||| |||||||| |||||||| ||||| || || | ||| || Sbjct 97934734 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCTTT 97934793 Query 24219 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCA 24278 ||||| ||||| | ||||| ||||| || ||||||||||||||||| || |||||||| Sbjct 97934794 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGCC 97934853 Query 24279 ATAAGTCTTTCTCC 24292 | | |||||| || Sbjct 97934854 ACCACTCTTTCCCC 97934867 >seq14 Length=124513186 Score = 114 bits (126), Expect = 2e-20 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934 |||| ||||| || |||||||| || |||||| ||| | || || || || ||||||| Sbjct 61453820 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATAT 61453879 Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994 ||| |||||| |||||||| ||||| || || || || || ||||| || | | || | Sbjct 61453880 TCAAAGATTGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCATCTTGAGAACGGTTT 61453939 Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 53045 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 61453940 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 61453990 Score = 107 bits (118), Expect = 2e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 53150 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 53209 || ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | Sbjct 61456673 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATG 61456732 Query 53210 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 53269 ||||||||||| |||| || |||||||| || || || ||||| || || | | |||| Sbjct 61456733 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 61456792 Query 53270 CTATTTCTAAGACCGTA 53286 || ||||| | ||| || Sbjct 61456793 CTGTTTCTTATACCATA 61456809 Score = 102 bits (112), Expect = 1e-16 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 54029 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGT 54088 ||||||||||| |||||||| |||||||||||||| | || |||||||||| | || Sbjct 61467730 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGCTGC 61467789 Query 54089 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 54148 || || |||||||| ||||| || | ||| ||||| | | || || ||||||| || Sbjct 61467790 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCAAGGC 61467849 Query 54149 TCCAAGTATAT 54159 |||| ||| || Sbjct 61467850 TCCAGGTAAAT 61467860 Score = 87.8 bits (96), Expect = 2e-12 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 54768 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 54827 |||| || | ||| |||||||||||||||| || || || || || || || || || | Sbjct 61485092 CACTGAACACTTTCTTTGTTTCTTTGTGTAAGTTAGAGACAGCAATCCTGGCTGCCAGGA 61485151 Query 54828 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCA 54887 | ||||| || || || | ||||| | || || ||| |||| || | || ||| || | Sbjct 61485152 TAGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 61485211 Query 54888 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 54933 ||| || || || || ||| | || | |||||||| || ||||| Sbjct 61485212 GTTCCACTGTGGTGACCCCACTGTACAAGCCTTGGATTACTTTCAT 61485257 >seq13 Length=104990034 Score = 104 bits (114), Expect = 3e-17 Identities = 95/120 (79%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 24395 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 24454 |||||| | || || ||||| | ||||||||||||||| ||||| |||||||| ||||| Sbjct 9461211 ATCTTTTATGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGC 9461152 Query 24455 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTC 24514 ||||| || || |||||||| | || || |||||||| |||||| | |||||| || Sbjct 9461151 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 9461092 >seq12 Length=128289686 Score = 104 bits (114), Expect = 3e-17 Identities = 153/216 (71%), Gaps = 3/216 (1%) Strand=Plus/Minus Query 21922 ATCTAGAGATTGTACTTCTTTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGC 21981 ||| | || ||| ||||||| | |||||||||| | || |||| | || ||||| || Sbjct 60586989 ATCCAAAGCTTGAACTTCTTCTATTTCTGGATAAAAAATGCGTTCGCAAATGAGCTGTGC 60586930 Query 21982 TATTCTATCCCCCGTATTTACATTAAATGTATATTTTCCATTATTAATAAGAATGACTCC 22041 |||| ||| ||| | || || | ||| | | ||| ||| ||||| || | || || Sbjct 60586929 AATTCGATCACCCTTTTTGACTTGAAACTTTTCTTTGCCAAAATTAAACAGTACAACACC 60586870 Query 22042 TATATTTCCCCTATAATCTTCGTCTATTACACCGCCTCCTATATCAAT---GCCTTTTAG 22098 | |||||| ||||||||||| | ||| ||||| |||||| |||||| | |||| Sbjct 60586869 AACATTTCCTCTATAATCTTCATTTATGACACCAGCTCCTACATCAATAAAGTGTTTTGC 60586810 Query 22099 GGACAGACCAGACCTAGGAGCTATTCTACCATAGCA 22134 | || || |||| ||||||| ||| ||||| || Sbjct 60586809 AGCCAAGCCTGACCGTGGAGCTACTCTTCCATAACA 60586774 >SEQ44210 Length=79069 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/216 (70%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 21922 ATCTAGAGATTGTACTTCTTTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGC 21981 ||| | || ||| ||||||| | |||||||||| | || |||| | || || || || Sbjct 9507 ATCCAAAGCTTGAACTTCTTCTATTTCTGGATAAAAAATCCGTTCGCAAATGAGTTGTGC 9566 Query 21982 TATTCTATCCCCCGTATTTACATTAAATGTATATTTTCCATTATTAATAAGAATGACTCC 22041 |||| ||| ||| | || || | ||| | | ||| ||| ||||| || | || || Sbjct 9567 AATTCGATCACCCTTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACC 9626 Query 22042 TATATTTCCCCTATAATCTTCGTCTATTACACCGCCTCCTATATC---AATGCCTTTTAG 22098 | |||||| ||||||||||| ||||| ||||| |||||| ||| || | ||| Sbjct 9627 AACATTTCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCAGTAAAGTGATTTGC 9686 Query 22099 GGACAGACCAGACCTAGGAGCTATTCTACCATAGCA 22134 | || || |||| ||||||| ||| ||||| || Sbjct 9687 AGCCAAGCCTGACCCTGGAGCTACTCTTCCATAACA 9722 >seq19 Length=51387494 Score = 95.1 bits (104), Expect = 1e-14 Identities = 177/255 (69%), Gaps = 9/255 (4%) Strand=Plus/Minus Query 21883 TCCGGTTGATCCAAACCCT--TGATCTCCTCTATCTGTACTATCTAGAGATTGTACTTCT 21940 ||| || || ||||| ||| ||| | ||| | ||| ||| | || ||| |||||| Sbjct 45564561 TCCAGTAGAACCAAAACCTCCTGAGCCCCTTTTGGTGTC--ATCCAAAGCTTGAACTTCT 45564504 Query 21941 TTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCCCCCGTATTT 22000 | | ||||||||| | || |||| | | || ||||| || |||| ||| | ||||| Sbjct 45564503 TCTATTTCTGGATAGAACATCCGTTCACAAATGAGCTGTGCAATTCGATCACGT-TATTT 45564445 Query 22001 -ACATTAAATGTATATTTTCCATTATTAATAAGAATGACTCCTATATTTCCCCTATAATC 22059 || | ||| | | ||| ||| ||||| | | || || |||||||| |||||||| Sbjct 45564444 GACTTCAAACTTTTCTTTGCCAAAATTAAAGACTACAACACCAATATTTCCTCTATAATC 45564385 Query 22060 TTCGTCTATTACACCGCCTCCTATAT---CAATGCCTTTTAGGGACAGACCAGACCTAGG 22116 ||| ||| | ||||| |||||| || ||| | |||| | || ||||||| || Sbjct 45564384 TTCATCTGTGACACCAGCTCCTACATCTACAAAGTGTTTTGCAGCCAAGCCAGACCGTGG 45564325 Query 22117 AGCTATTCTACCATA 22131 ||||| ||| ||||| Sbjct 45564324 AGCTACTCTTCCATA 45564310 >seq9 Length=125784921 Score = 93.3 bits (102), Expect = 5e-14 Identities = 147/209 (70%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 21883 TCCGGTTGATCCAAACCCT--TGATCTCCTCTATCTGTACTATCTAGAGATTGTACTTCT 21940 ||| || || ||||| ||| ||| | ||| || ||| ||| | || ||| |||||| Sbjct 85039906 TCCAGTGGAACCAAAACCTCCTGAACCCCTTTAGGTGTC--ATCCAAAGCTTGAACTTCT 85039963 Query 21941 TTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCCCCCGTATTT 22000 | | ||| |||||| | || |||| | || ||||| || |||| ||| | | | || Sbjct 85039964 TCTATTTCCGGATAAAAAATCCGTTCGCAAATGAGCTGTGCAATTCGATCACACTTTTTG 85040023 Query 22001 ACATTAAATGTATATTTTCCATTATTAATAAGAATGACTCCTATATTTCCCCTATAATCT 22060 || | ||| | | ||| ||| |||| || | || || | |||||| ||||||||| Sbjct 85040024 ACTTCAAACTTTTCTTTGCCAAAGTTAAACAGTACAACACCAACATTTCCTCTATAATCT 85040083 Query 22061 TCGTCTATTACACCGCCTCCTATATCAAT 22089 || ||||| ||||| |||||| |||||| Sbjct 85040084 TCATCTATGACACCAGCTCCTACATCAAT 85040112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593252307604320