Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq13 114 1e-20 seq15 113 4e-20 seq17 91.5 1e-13 seq8 91.5 1e-13 seq19 82.4 7e-11 >seq13 Length=104990034 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 28958 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 29017 ||||||||| || ||| | ||||| | ||||| || ||||| ||| ||| ||||| Sbjct 67300522 AAAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACC 67300581 Query 29018 CGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 29077 | | || ||| | | || | ||| || || ||||| ||||| | || || Sbjct 67300582 CTCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 67300641 Query 29078 TCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTA 29137 ||| |||||||| |||||||| ||||| |||||||||||| ||| || | || || Sbjct 67300642 TCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTA 67300701 Query 29138 CAATATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173 ||||||||| ||||| ||||||||||| | ||||| Sbjct 67300702 CAATATTCAAAAGGAGTCTACTCTTCATCTTGTGTT 67300737 >seq15 Length=108049171 Score = 113 bits (124), Expect = 4e-20 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 28958 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 29017 ||||||||| || ||| | ||||| | ||||| || ||||| ||| |||| ||||| Sbjct 106342910 AAAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAAGTTGAACC 106342969 Query 29018 CGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 29077 | | || ||| | || | ||| || || ||||| ||||| | || || Sbjct 106342970 CTCGGATACGACAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 106343029 Query 29078 TCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTA 29137 ||| |||||||| |||||||| ||||| |||||||||||| ||| || | || || Sbjct 106343030 TCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTA 106343089 Query 29138 CAATATTCAGAAGGAATCTACTCTTCA 29164 ||||||||| ||||| ||||||||||| Sbjct 106343090 CAATATTCAAAAGGAGTCTACTCTTCA 106343116 Score = 100 bits (110), Expect = 2e-16 Identities = 152/215 (71%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 |||||||| || ||||| ||||| | |||| || ||||| ||| ||| | |||||| Sbjct 64068259 AAAATGCAGATTTTCATGAAAACCCTTACGGAGAAGACCATCACCCTCGAGGCTGAACCC 64068200 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || ||| | || | ||| | || ||||| ||||| | || ||| Sbjct 64068199 TCGGATACGATATAAAATGTAAAGGCCGAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 64068140 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 || |||||||| |||||||| ||||| |||||||||||| ||| || | || ||| Sbjct 64068139 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 64068080 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173 || ||||| ||||| ||||||||||| | ||||| Sbjct 64068079 AA-ATTCAAAAGGAGTCTACTCTTCATCTCGTGTT 64068046 >seq17 Length=91399201 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/227 (69%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 |||||||| || ||||| ||||| | ||||| || ||||| ||| || |||||| Sbjct 61604372 AAAATGCAGATTTTCATGAAAACCCTTACGGG-AAGACCATCACCCTTGATGTTGAACCC 61604430 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || ||| | | || | ||| | || ||||| ||||| | || | | Sbjct 61604431 TCGGATACGATAGAAAATGTAAAGGCCGAGATCCAGGATAAGGAAGGAATTCCTCCTGCT 61604490 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 || |||||| |||||||| ||||| ||| |||||||| | ||| || | || ||| Sbjct 61604491 CAGCAAAGAGGGATCTTTGCTGGCAAGCAAGTGGAAGATGCATGGACTTTGTCTGACTAC 61604550 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGG 29185 |||||| | ||||| ||||||||||| | |||||| || | || || Sbjct 61604551 AATATTGAAAAGGAGTCTACTCTTCATCTTGTGTTAAGACTTCGTGG 61604597 >seq8 Length=140346614 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 |||||||| || ||| | ||||| | ||||| || ||||| ||| ||| |||||| Sbjct 71113834 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 71113775 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || ||| | | || | ||| || || || || ||||| | || | | Sbjct 71113774 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGAGAAGGAAGGAATTCCTTCTGCT 71113715 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 | ||||||| |||||||| ||||| |||||||||||| ||| || | || ||| Sbjct 71113714 CCGTAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 71113655 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173 |||| ||| ||||| ||||||||||| | ||||| Sbjct 71113654 AATAGTCAAAAGGAGTCTACTCTTCATCTTGTGTT 71113620 >seq19 Length=51387494 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/206 (70%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 28959 AAAATGCAAATATT-CATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 29017 |||||||| || || | | ||||| | || || || ||||| ||| ||| | ||||| Sbjct 7323224 AAAATGCAGATTTTTCCTGAAAACCCTTACAGGGAAGACCATCACCCTCGAGGCTGAACC 7323283 Query 29018 CGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCC-CGTAG 29076 | | || ||||| | ||| | | || || | ||| ||||| | || | || Sbjct 7323284 CTCGGATACGGTAGAAGATGGAAGGGTCAAGATCTGGGGTAAGGAAGGAATTCCTCCTA- 7323342 Query 29077 ATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATT 29136 |||| |||||||| |||||| | || ||||||||||||||| ||| || | || | Sbjct 7323343 ATCAGCAAAGACTGATCTTTACTGGTAAACAACTGGAAGATGGATGTACTTTGTCTGACT 7323402 Query 29137 ACAATATTCAGAAGGAATCTACTCTT 29162 |||| ||||| ||||| ||| ||||| Sbjct 7323403 ACAACATTCAAAAGGAGTCTCCTCTT 7323428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428005896704270