Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq17 527 8e-145 seq2 324 2e-83 seq4 123 3e-23 >seq17 Length=91399201 Score = 527 bits (584), Expect = 8e-145 Identities = 442/542 (82%), Gaps = 0/542 (0%) Strand=Plus/Plus Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116 || ||||| |||||||| ||||| | | | | ||||||| ||||| ||||||||||||| Sbjct 77585866 AGGAGGGCTTCGATGTCAGGCTCGATGTCAATGGTCTGGAAGCGGCGGCTGTACCTGCGT 77585925 Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176 |||||| ||||||| ||||||| ||||||||||||||||||||| || ||||||||| Sbjct 77585926 ACGGGCACACCGTCAGGGCCCACCAGGAACTTCTCGAAGTTCCAGGCAACATCGTTGCGG 77585985 Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTA 83236 ||||| |||||||||| ||||||| ||| ||| ||| ||||| | |||||||| Sbjct 77585986 CACACCGGAGACCAGGTGATGAGCTTGGGATCGGTCATGAGCGCAGTGGCATCGTCGCTG 77586045 Query 83237 GGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACC 83296 || || ||||||||||| || |||||||||||||| || || |||| ||||||||| ||| Sbjct 77586046 GGGGCTGGCAGGGCCTCCCGCAGGAAGGCGAAGAGAGGGTGCGCCCCTGCACCGTTCACC 77586105 Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTC 83356 |||||||||||||||||||| ||||| |||||||| || ||||| ||||||| ||| Sbjct 77586106 TCGCACTTCTCGAAGAGCATGAAGTTGGGCTCGAACCCACCACCAGGTCGGACGTACTTG 77586165 Query 83357 AGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGACCGAACTGGTTACACGGG 83416 || ||| || ||||| | |||| |||||| ||||| || || |||||||| |||||| Sbjct 77586166 AGAGAATTCAGAATCTCTTCGTTCTTGGCGTTCTCCTGATGCCCAAACTGGTTGCACGGG 77586225 Query 83417 AACCCAAGCACTACCAGCCCCCGAGCTCCTAGGCGCCGCTGCAGCTCGTTCATCTGAGTG 83476 || || ||||| ||||| ||||| | || |||||||||||||||||||||||||| ||| Sbjct 77586226 AAGCCGAGCACCACCAGGCCCCGGGGCCCAAGGCGCCGCTGCAGCTCGTTCATCTGGGTG 77586285 Query 83477 TACTCCCGGACCGTGCTACCTCAGAGGGACGCTACGTTCTCGATGAGCAAGACCCGGCCC 83536 || |||||||||||| | |||||||||||||| || |||||||| || | ||| |||| Sbjct 77586286 TAGTCCCGGACCGTGGTGCCTCAGAGGGACGCCACATTCTCGATAAGTAGCACCTTGCCC 77586345 Query 83537 CGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGGTAATCGGGCGTGCTGAGAAGGCGTAC 83596 | || | |||| | ||||||||| || || |||| | |||||| || |||||||||||| Sbjct 77586346 CTTAGGGAGCCCAGGCTCACAGGCTCCCCGCCGGCCAGCGGGCGCGCCGAGAAGGCGTAC 77586405 Query 83597 AC 83598 || Sbjct 77586406 AC 77586407 >seq2 Length=188283584 Score = 324 bits (358), Expect = 2e-83 Identities = 274/337 (81%), Gaps = 0/337 (0%) Strand=Plus/Minus Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116 || ||||| |||||||| ||||| | | | | ||||||| ||||| ||||||||||||| Sbjct 86337379 AGGAGGGCTTCGATGTCAGGCTCGATGTCAATGGTCTGGAAGCGGCGGCTGTACCTGCGT 86337320 Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176 |||||| ||||||| ||||||| ||||||||||||||||||||| || ||||||||| Sbjct 86337319 ACGGGCACACCGTCAGGGCCCACCAGGAACTTCTCGAAGTTCCAGGCAACATCGTTGCGG 86337260 Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTA 83236 ||||| |||||||||| ||||||| ||| ||| ||| ||||| | |||||||| Sbjct 86337259 CACACCGGAGACCAGGTGATGAGCTTGGGATCGGTCATGAGCGCAGTGGCATCGTCGCTG 86337200 Query 83237 GGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACC 83296 || || ||||||||||| || |||||||||||||| || || |||| ||||||||| ||| Sbjct 86337199 GGGGCTGGCAGGGCCTCCCGCAGGAAGGCGAAGAGAGGGTGCGCCCCTGCACCGTTCACC 86337140 Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTC 83356 |||||||||||||||||||| ||||| |||||||| || ||||| ||||||| ||| Sbjct 86337139 TCGCACTTCTCGAAGAGCATGAAGTTGGGCTCGAACCCACCACCAGGTCGGACGTACTTG 86337080 Query 83357 AGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCT 83393 || ||| || ||||| | |||| |||||| |||| Sbjct 86337079 AGAGAATTCAGAATCTCTTCGTTCTTGGCGTTCTCCT 86337043 Score = 208 bits (230), Expect = 9e-49 Identities = 171/208 (82%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450 |||| || || |||||||| |||||||| || ||||| ||||| ||||| | || |||| Sbjct 86336797 CCTGATGCCCAAACTGGTTGCACGGGAAGCCGAGCACCACCAGGCCCCGGGGCCCAAGGC 86336738 Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510 |||||||||||||||||||||| ||||| |||||||||||| | |||||||||||||| | Sbjct 86336737 GCCGCTGCAGCTCGTTCATCTGGGTGTAGTCCCGGACCGTGGTGCCTCAGAGGGACGCCA 86336678 Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGG 83570 | |||||||| || | ||| ||||| || | |||| | ||||||||| || || |||| Sbjct 86336677 CATTCTCGATAAGTAGCACCTTGCCCCTTAGGGAGCCCAGGCTCACAGGCTCCCCGCCGG 86336618 Query 83571 TAATCGGGCGTGCTGAGAAGGCGTACAC 83598 | |||||| || |||||||||||||| Sbjct 86336617 CCAGCGGGCGCGCCGAGAAGGCGTACAC 86336590 >seq4 Length=166074386 Score = 123 bits (136), Expect = 3e-23 Identities = 207/291 (71%), Gaps = 15/291 (5%) Strand=Plus/Minus Query 50410 GCACCTGCGCAAGATGTACG-GCGCAAGCAGGTCTATCTACAACTTCGCTGTGCGTATGC 50468 ||| ||||||| || |||| | ||| || ||| ||| |||||| || ||| ||| Sbjct 102952485 GCAGCTGCGCAGCATCTACGAGAGCA-GCCTGTCCATCGGCAACTTTGCCTCGCGCCTGC 102952427 Query 50469 TCGTGTACATGTTTCCAGAGCTCTTTACTGCGGAGAACCTGCACACGCACTTCAACTGCT 50528 | ||| || |||| || |||||||| || |||||||||| || ||| | ||||||| Sbjct 102952426 TGGTGCACCTGTTCCCCGAGCTCTTCACCCACGAGAACCTGCGCAAGCAGTACAACTGCA 102952367 Query 50529 ACGGCTCCATGGGCAAGC-GCAGGCTCGACCCGCTACGCCTGCGCTTGCTCCGGCACTAT 50587 ||||||| ||||||| |||| || |||||| ||| | | |||| ||||| Sbjct 102952366 GCGGCTCCCTGGGCAAAAAGCAG-CTGGACCCGTCCCGCATCAAGCTCATCCGTCACTAC 102952308 Query 50588 GTGCAGTTGCTGCACCCGGCGGCGCGC----AACGAGCGCGTGTGGATCACAAAGTTCCT 50643 |||||| |||| ||||| ||||| ||||| ||||| |||| | ||||| | Sbjct 102952307 GTGCAGCTGCTCTACCCG----CGCGCCAAAAACGACCGCGTCTGGACCCTGGAGTTCGT 102952252 Query 50644 GGCGTGCCTGGACGAGCGCTGCCGGCGCCGCTGCGCACGGA-CACAGGCGC 50693 || ||||| ||||||||||||||||| | |||||| || |||||| Sbjct 102952251 GGGCAAACTGGATGAGCGCTGCCGGCGCCG--GGACACGGAGCAGAGGCGC 102952203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608315591789360