Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_001901.1 Length=46375 Score E Sequences producing significant alignments: (Bits) Value seq1 248 3e-61 seq9 199 1e-46 seq15 194 5e-45 seq21 185 3e-42 seq4 168 2e-37 seq2 158 4e-34 seq3 145 2e-30 seq11 118 3e-22 seq16 111 5e-20 seq12 104 7e-18 seq13 100 8e-17 seq10 84.2 6e-12 >seq1 Length=217458864 Score = 248 bits (274), Expect = 3e-61 Identities = 184/215 (86%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 6924 CGTTACCCGAAAAACTGGGTGCAAACGGGCGATCCGGCGCGTGAATTCACCATGATTCAG 6983 || ||||| ||||| |||| ||| |||| ||||||||||| |||||| ||||||| || Sbjct 196058637 CGCTACCCCAAAAAATGGGCGCAGTCGGGGGATCCGGCGCGCGAATTCCCCATGATACAA 196058696 Query 6984 TCAGCCCCGCTGATGCTGCTGGCAGACCCGGACGAGTTCGTGTCCGTCAAGCTGGCATAA 7043 |||| || |||||||||||| ||||||| |||| ||||| ||||||| ||||||||| Sbjct 196058697 TCAGTTCCTCTGATGCTGCTGCCAGACCCTGACGCATTCGTCTCCGTCATACTGGCATAA 196058756 Query 7044 CTTCCACCTGTGGCCCATTCGGGCCACCTTTCTGGAGTATTACCCATGACAGAGAAAGAA 7103 ||||| || ||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 196058757 CTTCCCCCAGTGGCCCTGTCGGGCCACCTTTCTGGAGTATTTCCCATGACAGAGAAAGAA 196058816 Query 7104 AAGCTGATTGCTCGGCTGAATGAACTTGGTACCCA 7138 |||||||| ||||| |||||||| ||||| || || Sbjct 196058817 AAGCTGATCGCTCGCCTGAATGACCTTGGCACTCA 196058851 Score = 165 bits (182), Expect = 2e-36 Identities = 185/245 (76%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 6995 GATGCTGCTGGCAGACCCGGACGAGTTCGTGTCCGTCAAGCTGGCATAACTTCCACCTGT 7054 ||||||||||||||| || ||||| | || || | | | ||| | | || | | Sbjct 11954117 GATGCTGCTGGCAGATCCAGACGACATGGTCTCTGGCCAAGTGGGACACGTTGGGATTAT 11954058 Query 7055 GGCCCATTCGGGCCACCTTTCTGGAGTATTACCCATGACAGAGAAAGAAAAGCTGATTGC 7114 ||||| || | ||||||||||||||| ||||||||| |||| || | ||||| || Sbjct 11954057 GGCCCGGAAGG-CTACCTTTCTGGAGTATATCCCATGACAAAGAATGATGATCTGATCGC 11953999 Query 7115 TCGGCTGAATGAACTTGGTACCCAGCTTAACCGCGAAGTCAGCACCAGCGGCACCATTCA 7174 ||| |||| ||| |||| | |||||||||| ||| |||| |||||| ||||| ||||| Sbjct 11953998 TCGCCTGATTGACTTTGGCTCACAGCTTAACCACGAGGTCAACACCAGAGGCACGATTCA 11953939 Query 7175 GGAACTCACTATGCGTATTGCTGAGCTTGAAGAGGAGCTGGATGGAGACGCCACCTCGGT 7234 || | ||||||||||||||||| || |||||||||||||||| || ||| ||| | Sbjct 11953938 -GATCCTACTATGCGTATTGCTGACCTGGAAGAGGAGCTGGATGCTGATGCCTGTTCGAT 11953880 Query 7235 TGACG 7239 ||||| Sbjct 11953879 TGACG 11953875 Score = 84.2 bits (92), Expect = 6e-12 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 6954 GATCCGGCGCGTGAATTCACCATGATTCAGTCAGCCCCGCTGATGCTGCTGGCAGACCCG 7013 ||||||||||| ||||||||||||||| ||||| ||||||||||||||| ||||||| Sbjct 110128760 GATCCGGCGCGCTAATTCACCATGATTCCATCAGCTCCGCTGATGCTGCTGCCAGACCCT 110128819 Query 7014 GACG 7017 |||| Sbjct 110128820 GACG 110128823 Score = 80.6 bits (88), Expect = 8e-11 Identities = 99/133 (74%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 6884 TGATGCCGATGCCCAGCGAGAAGGTATCAACGCTTCGACGCGTTACCCGAAAAACTGGGT 6943 || ||||||||||| ||| || ||| | || || || | | ||| | ||| ||||| Sbjct 21545278 TGCTGCCGATGCCCCGCGCGA-GGTCCCCT-GCCTCTACACTCTTCCCAATAAAATGGGT 21545221 Query 6944 GCAAACGGGCGATCCGGCGCGTGAATTCACCATGATTCAGTCAGCCCCGCTGATGCTGCT 7003 |||| ||| ||| ||||||| |||||| ||| ||||| || | |||||||||||| | Sbjct 21545220 GCAATCGGTGGATTCGGCGCGCGAATTCCCCAAGATTCTTTCTTCTCCGCTGATGCTGAT 21545161 Query 7004 GGCAGACCCGGAC 7016 | || |||| ||| Sbjct 21545160 GCCAAACCCTGAC 21545148 >seq9 Length=125784921 Score = 199 bits (220), Expect = 1e-46 Identities = 192/245 (78%), Gaps = 1/245 (0%) Strand=Plus/Plus Query 7027 CCGTCAAGCTGGCATAACTTCCACCTGTGGCCCATTCGGGCCACCTTTCTGGAGTATTAC 7086 |||| || ||| ||||||||| || ||||||| | |||||| |||| ||| | Sbjct 53622880 CCGTGAAACTGTAATAACTTCCCCCCGTGGCCCTGCCTTATGACCTTTATGGAAAATTTC 53622939 Query 7087 CCATGACAGAGAAAGAAAAGCTGATTGCTCGGCTGAATGAACTTGGTACCCAGCTTAACC 7146 |||||||| | |||||||| ||||| ||||| |||||||| ||||| | | ||||| || Sbjct 53622940 CCATGACAAAAAAAGAAAATCTGATCGCTCGTCTGAATGACCTTGGCATTCTGCTTAGCC 53622999 Query 7147 GCGAAGTCAGCACCAGCGGCACCATTCAGGAACTCACTATGCGTATTGCTGAGCTTGAAG 7206 |||| ||| ||||| ||| || |||| |||||| || ||||||||||||||||| |||| Sbjct 53623000 GCGAGGTCTGCACCTCCGGTACGATTCTGGAACTTACCATGCGTATTGCTGAGCTGGAAG 53623059 Query 7207 AGGAGCTGGATGGAGACGCCACCTCGGTTGACGGCGAAAGCGGCGGGCAGAATGCTGCCG 7266 |||| |||||||| || ||| || ||||||| |||| ||| | | |||||||| ||| Sbjct 53623060 AGGACCTGGATGGTGATGCC-TTTCTATTGACGGTGAAAACGGAGAGAAGAATGCTCCCG 53623118 Query 7267 ACAGC 7271 ||||| Sbjct 53623119 ACAGC 53623123 >seq15 Length=108049171 Score = 194 bits (214), Expect = 5e-45 Identities = 168/207 (81%), Gaps = 1/207 (0%) Strand=Plus/Plus Query 7066 GCCACCTTTCTGGAGTATTACCCATGACAGAGAAAGAAAAGCTGATTGCTCGGCTGAATG 7125 ||| |||||||||| |||| ||||| ||||||||| | |||| ||||| || || Sbjct 42528583 GCCTCCTTTCTGGAATATTTCCCATTTTTGAGAAAGAATTG-TGATCGCTCGCCTTTTTG 42528641 Query 7126 AACTTGGTACCCAGCTTAACCGCGAAGTCAGCACCAGCGGCACCATTCAGGAACTCACTA 7185 | ||| ||| || ||||||||||| ||||||||||||||| | ||||| ||||| || | Sbjct 42528642 ACCTTTTTACTCACCTTAACCGCGAGGTCAGCACCAGCGGCCCGATTCATGAACTTACCA 42528701 Query 7186 TGCGTATTGCTGAGCTTGAAGAGGAGCTGGATGGAGACGCCACCTCGGTTGACGGCGAAA 7245 |||||||||||||||| ||||||||||||||||| || |||| ||| ||||||| |||| Sbjct 42528702 TGCGTATTGCTGAGCTGGAAGAGGAGCTGGATGGTGATGCCAGTTCGATTGACGGTGAAA 42528761 Query 7246 GCGGCGGGCAGAATGCTGCCGACAGCA 7272 ||| | |||||||| ||||||||| Sbjct 42528762 ACGGAGACAAGAATGCTCCCGACAGCA 42528788 >seq21 Length=143691637 Score = 185 bits (204), Expect = 3e-42 Identities = 146/175 (83%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 6993 CTGATGCTGCTGGCAGACCCGGACGAGTTCGTGTCCGTCAAGCTGGCATAACTTCCACCT 7052 |||||||||||| || |||| ||| ||| | |||||||| ||| ||| ||||| || Sbjct 7491551 CTGATGCTGCTGCCACACCCTGACACATTCATCTCCGTCAAACTGAAATACCTTCCCCCA 7491492 Query 7053 GTGGCCCATTCGGGCCACCTTTCTGGAGTATTACCCATGACAGAGAAAGAAAAGCTGATT 7112 |||||| || ||||||||||||||| |||| ||| |||||||||||||||| ||||| Sbjct 7491491 ATGGCCCTGTCTGGCCACCTTTCTGGACTATTTCCCCTGACAGAGAAAGAAAAACTGATC 7491432 Query 7113 GCTCGGCTGAATGAACTTGGTACCCAGCTTAACCGCGAAGTCAGCACCAGCGGCA 7167 ||||| |||||||| ||||| || |||||||||||||| |||| ||||||||||| Sbjct 7491431 GCTCGCCTGAATGACCTTGGCACTCAGCTTAACCGCGAGGTCAACACCAGCGGCA 7491377 >seq4 Length=166074386 Score = 168 bits (186), Expect = 2e-37 Identities = 129/153 (84%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 7067 CCACCTTTCTGGAGTATTACCCATGACAGAGAAAGAAAAGCTGATTGCTCGGCTGAATGA 7126 |||||||||||||||||| ||||||||||| | |||| ||||| ||||| |||||||| Sbjct 42424531 CCACCTTTCTGGAGTATTTCCCATGACAGACACAGAATCCCTGATCGCTCGCCTGAATGA 42424590 Query 7127 ACTTGGTACCCAGCTTAACCGCGAAGTCAGCACCAGCGGCACCATTCAGGAACTCACTAT 7186 ||||| || || |||||| || ||||||||| ||||| |||||||||||| || || Sbjct 42424591 CCTTGGCACTCATGTTAACCTCGTGGTCAGCACCTTCGGCATCATTCAGGAACTTACGAT 42424650 Query 7187 GCGTATTGCTGAGCTTGAAGAGGAGCTGGATGG 7219 |||||||||||| || ||| ||||||||||||| Sbjct 42424651 GCGTATTGCTGAACTGGAACAGGAGCTGGATGG 42424683 >seq2 Length=188283584 Score = 158 bits (174), Expect = 4e-34 Identities = 156/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 7071 CTTTCTGGAGTATTACCCATGACAGAGAAAGAAAAGCTGATTGCTCGGCTGAATGAACTT 7130 |||| ||||| || | ||||| || |||| | | ||| |||| |||||||| ||| Sbjct 40231735 CTTTATGGAGAATGTACTATGACTGATAAAGCTTATCCGATCGCTCACCTGAATGACCTT 40231794 Query 7131 GGTACCCAGCTTAACCGCGAAGTCAGCACCAGCGGCACCATTCAGGAACTCACTATGCGT 7190 | || |||||||||||||| |||| ||| | ||| || ||||| ||||| || ||||| Sbjct 40231795 GTCACTCAGCTTAACCGCGAGGTCACCACAATCGGAACGATTCATGAACTTACCATGCGG 40231854 Query 7191 ATTGCTGAGCTTGAAGAGGAGCTGGATGGAGACGCCACCTCGGTTGACGGCGAAAGCGGC 7250 ||||||||||| ||||||||||||||||| || | ||| ||||||| |||| ||| Sbjct 40231855 ATTGCTGAGCTGGAAGAGGAGCTGGATGGTGATGGGCTTTCGATTGACGGTGAAAACGGA 40231914 Query 7251 GGGCAGAATGCTGCCGACAGCA 7272 | | | |||||| ||||||||| Sbjct 40231915 GAGAACAATGCTCCCGACAGCA 40231936 >seq3 Length=181338541 Score = 145 bits (160), Expect = 2e-30 Identities = 111/129 (86%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 7068 CACCTTTCTGGAGTATTACCCATGACAGAGAAAGAAAAGCTGATTGCTCGGCTGAATGAA 7127 |||||||||||| |||| |||||| | ||| |||||||||| ||||| ||||| || Sbjct 94132220 CACCTTTCTGGACTATTCTTGATGACAAA-AAATAAAAGCTGATCGCTCGCCTGAA-GAC 94132277 Query 7128 CTTGGTACCCAGCTTAACCGCGAAGTCAGCACCAGCGGCACCATTCAGGAACTCACTATG 7187 |||||| | || ||||||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct 94132278 CTTGGTGCTCATCTTAACCGCGAGGTCAGCACCAGCGGCACCATTCAAGAACTTACTATG 94132337 Query 7188 CGTATTGCT 7196 ||||||||| Sbjct 94132338 CGTATTGCT 94132346 Score = 95.1 bits (104), Expect = 4e-15 Identities = 150/210 (71%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 7364 TGACCAGGTATCAGTAGAAACGCTGGCTACCCTGCATGTTGAGGCACTACATGCCACGCG 7423 ||||| | ||||| || || | | || ||| ||| | | || || || |||||||| Sbjct 67844472 TGACCGGTTATCAATACAATCCCCGGTGACCTTGCTCATATACGCGCTTCACGCCACGCG 67844413 Query 7424 TAACGAACCGGTATCCATCGTTGAGCCCGGTGTGATTATCCGCGTATCCGAACAGGATGC 7483 |||||| | || || || || ||||| ||||| ||||||||||| | || || || Sbjct 67844412 TAACGAGTCTGTGTCTATTGTCGAGCCTGGTGTCATTATCCGCGTGACTGACGTAGAGGC 67844353 Query 7484 AGACGAGCTGATCTCAAAGGGGCTGGCTCGCGAAGTCTGAAGGGGGCCGCATGGCTGATT 7543 |||| ||||| || || |||||| || ||| ||||| |||||| |||||||| | Sbjct 67844352 TAACGACCTGATATC-TCGGCGCTGGC-CGGGAAATCTGACAGGGGCCTAATGGCTGA-T 67844296 Query 7544 TCGATAATCTCTTTGACGAGGCCATGTCGC 7573 || | ||||| ||||| || | |||| || Sbjct 67844295 TCCACAATCT-TTTGATGAATCGATGTAGC 67844267 >seq11 Length=132960392 Score = 118 bits (130), Expect = 3e-22 Identities = 103/127 (81%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 7120 TGAATGAACTTGGTACCCAGCTTAACCGCGAAGTCAGCACCAGCG-GCACCATTCAGGAA 7178 ||||||| |||| || |||||||||||| | |||| ||||| | |||| ||||| ||| Sbjct 6697124 TGAATGACCTTGCCACTCAGCTTAACCGCTAGGTCATCACCACTGTGCACGATTCAAGAA 6697183 Query 7179 CTCACTATGCGTATTGCTGAGCTTGAAGAGGAGCTGGATGGAGACGCCACCTCGGTTGAC 7238 || || ||||||||||||||||| ||| |||| |||||||| || ||| ||| ||||| Sbjct 6697184 CTTACGATGCGTATTGCTGAGCTGGAAAAGGAACTGGATGGTGATGCCTTTTCGATTGAC 6697243 Query 7239 GGCGAAA 7245 || |||| Sbjct 6697244 GGTGAAA 6697250 >seq16 Length=74961506 Score = 111 bits (122), Expect = 5e-20 Identities = 82/96 (85%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 7043 ACTTCCACCTGTGGCCCATTCGGGCCACCTTTCTGGAGTATTACCCATGACAGAGAAAGA 7102 |||||| || ||||||| |||||||||||||||||| |||| ||||||||| | ||||| Sbjct 40695634 ACTTCCCCCCGTGGCCCTGTCGGGCCACCTTTCTGGAATATTTCCCATGACAAATAAAGA 40695575 Query 7103 AAAGCTGATTGCTCGGCTGAATGAACTTGGTACCCA 7138 ||| ||||| ||||| |||||||| ||||| || || Sbjct 40695574 AAAACTGATCGCTCGCCTGAATGACCTTGGCACTCA 40695539 >seq12 Length=128289686 Score = 104 bits (114), Expect = 7e-18 Identities = 79/92 (86%), Gaps = 1/92 (1%) Strand=Plus/Plus Query 7070 CCTTTCTGGAGTATTA-CCCATGACAGAGAAAGAAAAGCTGATTGCTCGGCTGAATGAAC 7128 ||||||||||||||| ||||||||||| ||| |||| ||||| ||||| |||||||| | Sbjct 81058060 CCTTTCTGGAGTATTTTCCCATGACAGATAAAAAAAATCTGATCGCTCGCCTGAATGACC 81058119 Query 7129 TTGGTACCCAGCTTAACCGCGAAGTCAGCACC 7160 |||| || || ||||||||||| ||| ||||| Sbjct 81058120 TTGGCACTCAACTTAACCGCGAGGTCTGCACC 81058151 >seq13 Length=104990034 Score = 100 bits (110), Expect = 8e-17 Identities = 163/231 (71%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 7331 GGAAAAAGTAAAATCGGAAGCGGGTACAAATGGTGACCAGGTATCAGTAGAAACGCTGGC 7390 ||||||||| || | ||||||| | || | ||||| |||||||||| || ||| Sbjct 26573087 GGAAAAAGTTAATGCCGAAGCGGTCATAACGGATGACCGGGTATCAGTATAAGAAGTGGT 26573028 Query 7391 TACCCTGCATGTTGAGGCACTACATGCCACGCGTAACGAACCGGTATCCATCGTTGAGCC 7450 ||| |||| | | || || || |||||||||||| | || || || || |||| Sbjct 26573027 GACCTTGCACATAAACGCTCTTCACGCCACGCGTAACAAGTATGTGTCTATTGTCAAGCC 26572968 Query 7451 CGGTGTGATTATCCGCGTATCCGAACAGGATGCAGACGAGCTGATCTCAAAGGGGCTGGC 7510 ||||| ||||||| | | || || || |||| ||||| || || |||||| Sbjct 26572967 TGGTGT-CGTATCCGCTTGACTGACTTAGAGGCTAACGACCTGATATCTCGGGCGCTGGC 26572909 Query 7511 TCGC-GAAGTCTGA-AGGGGGCCGCATGGCTGATTTCGATAATCTCTTTGA 7559 | | ||| ||||| |||||||| |||||||||||||| |||| ||||| Sbjct 26572908 CCCCGGAAATCTGACAGGGGGCCTAATGGCTGATTTCGACTATCTTTTTGA 26572858 >seq10 Length=91330067 Score = 84.2 bits (92), Expect = 6e-12 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 6990 CCGCTGATGCTGCTGGCAGACCCGGACGAGTTCGTGTCCGTCAAGCTGGCATAACTTCCA 7049 || || ||||||||| | ||| || | ||| ||||| | |||| | ||||| Sbjct 478543 CCCCTTATGCTGCTGCCTTACCATGATTAATTCTGCTCCGTGGGGGTGGCCTGTCTTCCC 478484 Query 7050 CCTGTGGCCCATTCGGGCCACCTTTCTGGAGTATTACCCATGACAGAGAAAGAAAAGCTG 7109 || |||||| || |||| ||||||||||||||| ||| |||| || ||| |||||||| Sbjct 478483 CCCTTGGCCCTGTCCGGCCTCCTTTCTGGAGTATTTCCCCTGACCGAAAAATAAAAGCTG 478424 Query 7110 ATTGCTCGGCT 7120 || ||||| || Sbjct 478423 ATCGCTCGCCT 478413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148167057193396