Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq5 98.7 1e-15 seq7 96.9 5e-15 seq13 86.0 9e-12 >seq5 Length=183742232 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || || |||||||| || || | ||| | || | | | Sbjct 52770111 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAAACCATCACCCTTGAGGTCGAGCCCAGT 52770052 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| || | ||| ||||||||||| || || ||||| |||||||| || Sbjct 52770051 GACACCATTGAGAACGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCAG 52769992 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || || ||||| || ||||| | || ||| | || || | ||| || || Sbjct 52769991 CAGCGTCTGATATTTGCCGGCAAACAGCTGGAAGATGGCCGCACTCTCTCAGACTACAAC 52769932 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770 || || ||||| || || |||| |||| || || | |||||||| |||| Sbjct 52769931 ATCCAGAAAGAGTCCACCCTGCACCTGGTGTTGCGCCTGCGAGGTGGCATTA 52769880 >seq7 Length=162899863 Score = 96.9 bits (106), Expect = 5e-15 Identities = 157/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 124545 ATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACA 124604 || ||| | ||||| || || |||||||| || || | ||| | || | | ||| || Sbjct 148001275 ATCTTTGTGAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTCGAGCCCAGTGACACC 148001334 Query 124605 ATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGG 124664 ||| ||| | ||| ||||||||||| || || ||||| |||||||| || || | Sbjct 148001335 ATTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCAGCAGCGT 148001394 Query 124665 CTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAA 124724 || || ||||| || ||||| | || ||| | || || | ||| || || || || Sbjct 148001395 CTGATATTTGCCGGCAAACAGCTGGAAGATGGCCGCACTCTCTCAGACTACAACATCCAG 148001454 Query 124725 AAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770 ||||| || || |||| |||| || || | |||||||| |||| Sbjct 148001455 AAAGAGTCCACCCTGCACCTGGTGTTGCGCCTGCGAGGTGGCATTA 148001500 >seq13 Length=104990034 Score = 86.0 bits (94), Expect = 9e-12 Identities = 161/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || || | || || || || || || || || || | ||| ||||| | Sbjct 67300525 AATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCCTC 67300584 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| || ||| |||| || || || ||||| ||||| || || |||||||| Sbjct 67300585 GGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 67300644 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||||| || || ||||| || || ||| | || ||| | || || || || || || Sbjct 67300645 GCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 67300704 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774 ||||||||| || || ||| | ||| | || || | | || |||||| ||| || Sbjct 67300705 TATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGGTGCTAAGAA 67300761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 754858868691200