Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq15 102 1e-16 seq13 102 1e-16 SEQ44210 98.7 1e-15 seq17 91.5 2e-13 seq12 89.7 8e-13 seq4 86.0 9e-12 >seq15 Length=108049171 Score = 102 bits (112), Expect = 1e-16 Identities = 107/138 (78%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 ||||| | |||||| || || | ||| | |||||| || ||| || ||||| || || || Sbjct 106343140 CCACCACGAAGTCTCAAAACAAGATGAAGAGTAGACTCCTTTTGA-ATATTGTAGTCAGA 106343082 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||| | | ||| || | ||| || |||||||| |||| |||||||||||| ||||| Sbjct 106343081 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 106343022 Query 146170 AATTCCTTCTTTATCTTG 146187 ||||||||| ||||| || Sbjct 106343021 AATTCCTTCCTTATCCTG 106343004 Score = 95.1 bits (104), Expect = 2e-14 Identities = 106/138 (77%), Gaps = 3/138 (2%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 ||||| | |||||| || || | ||| | |||||| || ||| || || || || || || Sbjct 64068031 CCACCACGAAGTCTCAACACGAGATGAAGAGTAGACTCCTTTTGA-AT-TTGTAGTCAGA 64068088 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||| | | ||| || | ||| || |||||||| |||| |||||||||||| ||||| Sbjct 64068089 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 64068148 Query 146170 AATTCCTTCTTTATCTTG 146187 ||||||||| ||||| || Sbjct 64068149 AATTCCTTCCTTATCCTG 64068166 >seq13 Length=104990034 Score = 102 bits (112), Expect = 1e-16 Identities = 107/138 (78%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 ||||| | |||||| || || | ||| | |||||| || ||| || ||||| || || || Sbjct 67300752 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATATTGTAGTCAGA 67300694 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||| | | ||| || | ||| || |||||||| |||| |||||||||||| ||||| Sbjct 67300693 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 67300634 Query 146170 AATTCCTTCTTTATCTTG 146187 ||||||||| ||||| || Sbjct 67300633 AATTCCTTCCTTATCCTG 67300616 >SEQ44210 Length=79069 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 10437 GGATGTTATGCAAGATTAGCTCCCAGATCTGATTTAGCTCTAAATAAATTTATTGATATT 10496 || ||||||| |||| ||||||| | || | || ||| |||| | |||| |||| | Sbjct 9725 GGGTGTTATGGAAGAGTAGCTCCAGGGTCAGGCTTGGCTGCAAATCACTTTACTGATGTA 9666 Query 10497 GGAGCTGGAGTAATTGACGAAGATTATAGAGGAAATGTGGGAGTAATATTATTTAATCAT 10556 |||||||| || || || |||||||||||||||||||| || || || | |||||| | Sbjct 9665 GGAGCTGGTGTCATAGATGAAGATTATAGAGGAAATGTTGGTGTTGTACTGTTTAATTTT 9606 Query 10557 TCTAATGAAGATTTTATAATAAATAGAGGAGATAGAATATCTCAATTAATATGTGAAAAA 10616 || ||| | ||| | | || | || ||| |||| | ||| | || || ||| Sbjct 9605 GGCAAAGAAAAGTTTGAAGTCAAAAAGGGTGATCGAATTGCACAACTCATTTGCGAACGG 9546 Query 10617 ATTTTATATCCTAAAAT 10633 ||||| ||||| |||| Sbjct 9545 ATTTTTTATCCAGAAAT 9529 >seq17 Length=91399201 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/137 (76%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 146052 CACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAA 146111 |||| | ||||||||| || | ||| | |||||| || || ||||| || || || | Sbjct 61604599 CACCACGAAGTCTTAACACAAGATGAAGAGTAGACTCCTTTTCAATATTGTAGTCAGACA 61604540 Query 146112 GAGTTC-TGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||| | ||| ||| || | ||| || |||||||| ||| |||||||||| | |||||| Sbjct 61604539 AAGTCCATGC-ATCTTCCACTTGCTTGCCAGCAAAGATCCCTCTTTGCTGAGCAGGAGGA 61604481 Query 146171 ATTCCTTCTTTATCTTG 146187 |||||||| ||||| || Sbjct 61604480 ATTCCTTCCTTATCCTG 61604464 >seq12 Length=128289686 Score = 89.7 bits (98), Expect = 8e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 10437 GGATGTTATGCAAGATTAGCTCCCAGATCTGATTTAGCTCTAAATAAATTTATTGATATT 10496 || ||||||| |||| ||||||| | || | || ||| ||| | ||||||||| | Sbjct 60586771 GGGTGTTATGGAAGAGTAGCTCCACGGTCAGGCTTGGCTGCAAAACACTTTATTGATGTA 60586830 Query 10497 GGAGCTGGAGTAATTGACGAAGATTATAGAGGAAATGTGGGAGTAATATTATTTAATCAT 10556 |||||||| || || | |||||||||||||||||||| || || || | |||||| | Sbjct 60586831 GGAGCTGGTGTCATAAATGAAGATTATAGAGGAAATGTTGGTGTTGTACTGTTTAATTTT 60586890 Query 10557 TCTAATGAAGATTTTATAATAAATAGAGGAGATAGAATATCTCAATTAATATGTGAAAAA 10616 || ||| | ||| | | || | || ||| |||| | || | || || ||| Sbjct 60586891 GGCAAAGAAAAGTTTCAAGTCAAAAAGGGTGATCGAATTGCACAGCTCATTTGCGAACGC 60586950 Query 10617 ATTTTATATCCTAAAAT 10633 ||||| ||||| |||| Sbjct 60586951 ATTTTTTATCCAGAAAT 60586967 >seq4 Length=166074386 Score = 86.0 bits (94), Expect = 9e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 10437 GGATGTTATGCAAGATTAGCTCCCAGATCTGATTTAGCTCTAAATAAATTTATTGATATT 10496 || ||||||| |||| ||| ||| | |||| || ||| ||| | ||||||||| | Sbjct 81260462 GGGTGTTATGGAAGAGTAGTTCCATGGTCTGGCTTGGCTGCAAAACACTTTATTGATGTA 81260403 Query 10497 GGAGCTGGAGTAATTGACGAAGATTATAGAGGAAATGTGGGAGTAATATTATTTAAT 10553 |||||||| || || |||||| |||||||||||||| | || || || | |||||| Sbjct 81260402 GGAGCTGGTGTCATAGACGAAAATTATAGAGGAAATATTGGTGTTGTACTGTTTAAT 81260346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 742938698145280