Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq16 114 8e-21 seq5 111 1e-19 seq7 105 4e-18 seq11 102 5e-17 >seq16 Length=74961506 Score = 114 bits (126), Expect = 8e-21 Identities = 159/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 34171 CAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACG 34230 ||| | ||| |||||||| | || |||||||| ||||||||||| || || || Sbjct 15840415 CAGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCG 15840474 Query 34231 GTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTC 34290 | | || |||| |||||||||||| || ||||||| |||||||||| ||| | || || Sbjct 15840475 GCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTC 15840534 Query 34291 CTTGTCGGCTATCTTTTG--CTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACC 34348 ||| || || ||||| ||| | || | || | || | | || || || | Sbjct 15840535 CTTATC--CTGGATTTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGG 15840592 Query 34349 GTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||| |||||||| || || ||||| ||||||||||| Sbjct 15840593 GTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 15840633 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| |||||||| | || || ||||| ||||||||||| || Sbjct 15839725 CCACCCCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAG 15839784 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| |||||||||||| || ||||||| |||||||||| ||| Sbjct 15839785 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 15839844 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || || || || ||||| ||| | || | || | || | | || || Sbjct 15839845 ATGCCTTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 15839904 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| |||||||| || || ||||||||||||||||| Sbjct 15839905 TCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 15839951 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| |||||||| | || || ||||| ||||||||||| || Sbjct 15839953 CCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 15840012 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| |||||||||||| || ||||||| |||||||||| ||| Sbjct 15840013 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 15840072 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || || || || ||||| ||| | || | || | || | | || || Sbjct 15840073 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACT 15840132 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| |||||||| || || ||||| ||||||||||| Sbjct 15840133 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 15840179 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| |||||||| | || || ||||| ||||||||||| || Sbjct 15840181 CCACCTCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 15840240 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| |||||||||||| || ||||||| |||||||||| ||| Sbjct 15840241 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 15840300 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || || || || ||||| ||| | || | || | || | | || || Sbjct 15840301 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACT 15840360 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| |||||||| || || ||||| ||||||||||| Sbjct 15840361 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 15840407 >seq5 Length=183742232 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || ||||||||| | || |||||||| ||||||||||| || Sbjct 52769885 CCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAG 52769944 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| ||| ||||| || || || || ||||||||||| || Sbjct 52769945 AGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGG 52770004 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||||||||| || ||| ||||| | | | || | || | | ||||| Sbjct 52770005 ATACCCTCCTTGTCTTGAAT-TTTGGCTTTGACGTTCTCAATGGTGTCACTGGGCTCGAC 52770063 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||||||||| ||||| || ||||||||||||||||| Sbjct 52770064 CTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 52770111 >seq7 Length=162899863 Score = 105 bits (116), Expect = 4e-18 Identities = 158/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || ||||||||| | || |||||||| ||||||||||| || Sbjct 148001495 CCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAG 148001436 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| ||| ||||| || || || || ||||||||||| || Sbjct 148001435 AGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGG 148001376 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||||||||| || ||| ||||| | || | || | || | | ||||| Sbjct 148001375 ATACCCTCCTTGTCTTGAAT-TTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGAC 148001317 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGAT 34383 || | |||||||||||||| ||||| || ||||||||||| Sbjct 148001316 CTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAAGAT 148001275 Score = 89.7 bits (98), Expect = 3e-13 Identities = 162/233 (70%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||||||||||| || || |||||||| ||||||||| | || Sbjct 115127195 CCACCTCGCAGGCACAGCACCAGGTTTAGGGTGGACTCTTTCTGGATGTTGTAGCCTGAG 115127136 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGG 34281 || ||| | || |||| ||| || || || | || || ||||||||||| | ||| Sbjct 115127135 AGAGTGCGGCCATCCTCCAGCTGTTTCCCAGCAAGTATCAGACGCTGCTGGTCAGGTGGG 115127076 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGA 34340 | ||||||||| || ||| ||||| | || || | || | | |||| Sbjct 115127075 ATACCCCTCCTTGTCTTGAAT-TTTGGCTTTGACATTCTAAATGGTGTCACTGGGCTCGA 115127017 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCT 34393 || | |||||||| ||||| |||| || |||||||||||||||||| || Sbjct 115127016 TCTCAAGGGTGATGGTCTTGCCCATGAGGGTCTTCACAAAGATCTGCATCTCT 115126964 >seq11 Length=132960392 Score = 102 bits (112), Expect = 5e-17 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236 ||| |||| ||| | ||| |||||||| ||||||||||| ||||| || | || Sbjct 124901585 CAGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 124901644 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296 |||| |||||| || || || || |||| ||||||||| || | || |||||||| Sbjct 124901645 TTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTC 124901704 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 |||||| ||| | || | || | || | | ||||| || | |||||||| Sbjct 124901705 CTGGATCTTTGCCTTGACATTTTCAATAGTGTCACTGGGCTCGACCTCGAGGGTGATGGT 124901764 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 ||||| || || || ||||| |||||||||||| Sbjct 124901765 CTTGCCAGTCAGGGTCTTCACGAAGATCTGCATC 124901798 Score = 100 bits (110), Expect = 2e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| | ||| |||||||| ||||||||||| ||||| || | || Sbjct 124901814 AGCACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 124901873 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| |||||| || || || || | || |||||||||| || | || |||||||| Sbjct 124901874 TCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCGGGAGGAATGCCTTCCTTGTCT 124901933 Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||| |||||||| | | | || | || | | ||||| || | ||||| || Sbjct 124901934 TGGATC-TTTGCTTTGACGTTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATAGT 124901992 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 ||||| || || || ||||| |||||||||||| Sbjct 124901993 CTTGCCAGTCAGGGTCTTCACGAAGATCTGCATC 124902026 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| | ||| |||||||| ||||||||||| ||||| || | || Sbjct 124902270 AGCACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 124902329 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| ||| || || || || || | || ||||||||| || | || |||||||| Sbjct 124902330 TCCAGCTGTTTCCCAGCAAATATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCC 124902389 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 |||||| ||| | || | || | || | | ||||| || | |||||||| Sbjct 124902390 TGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 124902449 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 ||||| || || || ||||| |||||||||||| Sbjct 124902450 TTGCCAGTCAGGGTCTTCACGAAGATCTGCATC 124902482 Score = 100 bits (110), Expect = 2e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| || || |||||||| ||||||||||| ||||| || | || Sbjct 124902498 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCT 124902557 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| |||||| || || || || | || |||||||||| || | || ||||| || Sbjct 124902558 TCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCGGGAGGAATGCCTTCCTTATCT 124902617 Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||| |||||||| | | | || | || | | ||||| || | ||||| || Sbjct 124902618 TGGATC-TTTGCTTTGACGTTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATAGT 124902676 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 ||||| ||||| || ||||| |||||||||||| Sbjct 124902677 CTTGCCAGTGAGGGTCTTCACGAAGATCTGCATC 124902710 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| | || |||||||| ||||||||||| ||||| || | || Sbjct 124902042 AGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 124902101 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| ||| || || || || || | || ||||||||| || | || |||||||| Sbjct 124902102 TCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCC 124902161 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 |||||| ||| | || | || | ||| | | || || || | |||||||| Sbjct 124902162 TGGATCTTTGCCTTGACATTCTCAATGGTGTCGCTGGGCTCCACCTCGAGGGTGATGGTC 124902221 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 ||||| || || || ||||| |||||||||||| Sbjct 124902222 TTGCCAGTCAGGGTCTTCACGAAGATCTGCATC 124902254 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||| ||||| | || |||||||| ||||||||||| ||||| || | || Sbjct 124902726 AGCACGAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 124902785 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| |||||| || || || || |||| |||||||||| || | || ||||| || Sbjct 124902786 TCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTATCT 124902845 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 |||||| ||| | || | || | || | | || || || | |||||||| Sbjct 124902846 TGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTC 124902905 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || || || ||||| ||||||||||| Sbjct 124902906 TTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 124902937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322823019919040