Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq21 212 6e-50 seq8 111 1e-19 seq13 98.7 9e-16 >seq21 Length=143691637 Score = 212 bits (234), Expect = 6e-50 Identities = 606/919 (66%), Gaps = 22/919 (2%) Strand=Plus/Plus Query 15885 TTTAAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTGACATTT 15944 |||| || ||| ||| | | ||| ||| ||| || ||| |||| ||| ||| Sbjct 41472621 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGATTCGACACCACTCCCATCC 41472680 Query 15945 TTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTT 16004 | ||||| || | |||||||| |||||||| || || |||| | ||||||||| | Sbjct 41472681 TCTGATACTCCTTTACTCTCTTCTCAAAGAAGTTCGTCTTTC-----AGTGAAATATTCT 41472735 Query 16005 CCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGC---ATCCCAATTCCAACA 16061 ||||||| ||||| || || | | || | | | | || | |||| |||| || Sbjct 41472736 CCATAAAGTCAAATGGGTTCTCT--ACTCT-GAAAACCTTGCTAAAACCCAGTTCCGGCA 41472792 Query 16062 ATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTA 16121 ||| || |||||| | || || || || ||||||| | || ||||| || || | Sbjct 41472793 TG--TCTGTCTGCCACAGACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGA 41472850 Query 16122 ATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTA 16181 || ||||| | || || || | || | | |||||| ||| || | || ||| Sbjct 41472851 GCTTCACAGGCAAGGCCTCAGTGAGGAATTCCTGTTCTATCCAAACAGCATTGATAATTC 41472910 Query 16182 TATCTCTTACTACACTATTT-AACGGAGGGTTTAATAAGTGTTTAAACATTATACAAGCA 16240 | ||||||| | | || | || || || || | ||| || ||||| | || ||| Sbjct 41472911 TTTCTCTTATT-CTCTCCTCCAATGGTTTGTGTACCAGGTGATTGAACATCAGGCAGGCA 41472969 Query 16241 AAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGC 16300 |||||||| || || || || || | ||| || | || || ||||| || || || ||| Sbjct 41472970 AAATCACAGTGTAAACCCTCATCTCCACTAATAAGTTCATTGGAAAAGGTGAGGCCAGGC 41473029 Query 16301 ATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCT 16360 || ||||||||||| || | ||| ||||| | ||||| ||||||||||| || ||| Sbjct 41473030 ATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAAG---ATGCCT 41473086 Query 16361 TCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGT-TCTAtttttactttctatcca 16419 || |||| ||||| | || | || || || || || || ||| | | ||||| Sbjct 41473087 TCCGCTGCAGCAAAGACTACAACACGTTCCCCATAGGTAGCTGCTTTGTC-CCCAATCCA 41473145 Query 16420 ttttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAA 16479 | ||||||| ||| || | || ||||| ||| | || || ||||| || Sbjct 41473146 GTGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGCG 41473205 Query 16480 ATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGA 16539 | | | |||||||| |||| || ||||| || || || |||||||||||| | || Sbjct 41473206 AAATTCCCTTTCTTTGGGATCTTTTATGTAAGTGTCAATAAGGAAACTATACATTCCAGA 41473265 Query 16540 ATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTAC 16599 ||| || || ||||| || || || || ||| | || || | ||||| | | || || Sbjct 41473266 ATGTATGTTTTCCATGGCAATTTGGAAGCCACAGAAACAGCGGGCTTCTGTCACCTGAAC 41473325 Query 16600 TTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAA 16659 ||| | ||| | || | |||||| | || ||||| ||||| || ||| |||| || Sbjct 41473326 TTCTTGGCTAAATCACTCCACCAAGTTTGCATTTACTATGCCATCACTTGCTACAAAGAA 41473385 Query 16660 CGCAAGTATGTGTTTAATAAAAtttttttCGT-TATCTGAAAGTTTTAACCAGTCAGAAA 16718 | || | || ||||||| | | || | || | | || ||||| ||| Sbjct 41473386 AACCAGAACATGGGATATAAAATCTCTCTCCTCGGGCTTCAGGGATT-CCCAGTGCCAAA 41473444 Query 16719 AATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACA 16778 || || || | || ||||| || | ||||| || ||||| | ||||| ||||||| Sbjct 41473445 TGTCCTTGGACAGGTCCACCTCCTCCGCGGTCCAGAAGGAAGCTTCCGCCTTCTTATACA 41473504 Query 16779 TTTTCCATATGTCTTCGTA 16797 | | ||| || || | ||| Sbjct 41473505 TCTGCCAGATATCATGGTA 41473523 Score = 116 bits (128), Expect = 3e-21 Identities = 300/455 (66%), Gaps = 3/455 (1%) Strand=Plus/Minus Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294 |||||||| | ||| || || || || || || || || | || || |||||||| || Sbjct 132680219 CAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGG 132680160 Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAAT 16354 || ||||| |||||| |||| | | ||| ||||| ||||| |||||||||||||| Sbjct 132680159 CCAGGCATCAGTCCTTGTTTCCTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGAAG 132680100 Query 16355 ATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttct 16414 | | ||| ||| |||||| || | | || || || | || || ||| | | Sbjct 132680099 GTGCTTTCCACTAGGGCAAAGGCTGCAACACGTTCTCCATGGGTAACATCTTTGTTCCCA 132680040 Query 16415 atccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTA 16474 ||||| ||||| ||| || | || |||||| ||||| | || ||||| Sbjct 132680039 ATCCAACACAAGACCCAAACTGCCTTCTTCTTGACACAGGCATTGTTC-CAATGGCATTG 132679981 Query 16475 AATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATT 16534 || | | | | |||||||| ||||| ||| | || || || || | ||||| || Sbjct 132679980 AAGAGAAATTCCCTTTCTTTGTTATCTTTAATGT--GTGTCAATAAGGAGACTATTTATG 132679923 Query 16535 TCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATT 16594 || ||||| || || || | || || || || ||||| ||||| | ||| | || Sbjct 132679922 TCAGAATGTATGTTTTCTGTAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTCTGTAATC 132679863 Query 16595 TGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCA 16654 || | ||| ||| ||| | |||||||| | ||||| ||||| | |||||| Sbjct 132679862 TGAATTTCTTGAACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATGCTGCA 132679803 Query 16655 AAAAACGCAAGTATGTGTTTAATAAAAtttttttC 16689 || || || || || | ||||||| | |||| Sbjct 132679802 AAGAAAGCCAGAATATAGGATATAAAATATCTTTC 132679768 >seq8 Length=140346614 Score = 111 bits (122), Expect = 1e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 15885 TTTAAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTGACATTT 15944 |||||||||| ||| | | || || |||||| | | | || |||||||| | Sbjct 97923105 TTTAAAAATCTGCATCCAAGGTGAAGACGTTATCTGTGGTTTCTGCCATAACTGCAAAAC 97923164 Query 15945 TTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTT 16004 ||||| || ||||| || |||||||||||||||||||||||||| ||||| |||| Sbjct 97923165 GCTGATACTCCGAAACTCGTTTCTCAAAGAAATTTGTTTTTCCTTCTAAAGAAATGTTTT 97923224 Query 16005 CCATAAAATCAAAAGGATTTTTTG 16028 ||||||||||||||||||||| || Sbjct 97923225 CCATAAAATCAAAAGGATTTTCTG 97923248 >seq13 Length=104990034 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 16259 TCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTA 16318 || || || || || | || || |||||||| || || ||||| ||||||||||| || Sbjct 9463320 TCATCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 9463261 Query 16319 ATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCA 16378 | ||| ||||| | ||||| ||||| |||||||| || ||||| ||||| ||||| || Sbjct 9463260 AGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCT 9463201 Query 16379 ACCAATCGCTCACC 16392 || | || ||||| Sbjct 9463200 ACGACACGTTCACC 9463187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462146418952400