Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq21 298 7e-76 seq11 170 3e-37 seq14 114 2e-20 seq8 111 2e-19 seq13 104 3e-17 seq12 98.7 1e-15 SEQ44210 86.0 8e-12 seq9 86.0 8e-12 >seq21 Length=143691637 Score = 298 bits (330), Expect = 7e-76 Identities = 632/938 (67%), Gaps = 24/938 (3%) Strand=Plus/Plus Query 35811 TTTAAAAATCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 35867 |||| || ||| |||| | | |||| ||| ||| | || |||| |||||||| Sbjct 41472621 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGATTCGACACCACTCCCATCC 41472680 Query 35868 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 35927 | || || || || | || || || || || || || | | ||| ||||| | Sbjct 41472681 TCTGATACTCCTTTACTCTCTTCTCAAAGAAGTTCGTCTTTC-----AGTGAAATATTCT 41472735 Query 35928 CCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 35987 |||| || || ||||| || || | ||| || |||| |||| ||| | || Sbjct 41472736 CCATAAAGTCAAATGGGTTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCGGCATG- 41472794 Query 35988 ATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 36047 ||| ||||| ||| | || || ||| ||||| | |||||||| || || || | Sbjct 41472795 -TCTGTCTGCCACAGACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 41472853 Query 36048 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 36107 | || || | ||| |||| || ||||| ||||| || | || || | | || | Sbjct 41472854 TCACAGGCAAGGCCTCAGTGAGGAATTCCTGTTCTATCCAAACAGCATTGATAATTCTTT 41472913 Query 36108 ATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 36167 | ||| | | || || ||| | | | || || ||||||| || || |||| Sbjct 41472914 CTCTTATTCTCTCCTCCAATGGTTTGTGTACCAGGTGATTGAACATCAGGCAGGCAAAAT 41472973 Query 36168 CGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 36227 | ||||||| |||||| |||| |||||| | ||| |||||||| ||||| || ||||| | Sbjct 41472974 CACAGTGTAAACCCTCATCTCCACTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCATCA 41473033 Query 36228 GGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTA 36287 | || || || || ||||| ||||| || ||||| | |||||||||| | ||||| Sbjct 41473034 GTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAAGA---TGCCTTCCG 41473090 Query 36288 CTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACTTTT 36344 |||| |||||| | | || | || ||||| | | || |||| ||||| | Sbjct 41473091 CTGCAGCAAAGACTACAACACGTTCCCCATAGGTAGCTGCTTTGTCCCCAATCCAGTGCA 41473150 Query 36345 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGt 36404 |||||||| |||||||| || ||||||||||| || || || ||||| ||| || | | Sbjct 41473151 AGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGCGAAATT 41473210 Query 36405 ttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAA 36464 |||| || |||||| | || || ||||| | | |||||||||| | ||||| | Sbjct 41473211 CCCTTTCTTTGGGATCTTTTATGTAAGTGTCAATAAGGAAACTATACATTCCAGAATGTA 41473270 Query 36465 TGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTG 36524 ||||||| ||||| ||||| || || ||||||| | || || || | ||| |||||| Sbjct 41473271 TGTTTTCCATGGCAATTTGGAAGCCACAGAAACAGCGGGCTTCTGTCACCTGAACTTCTT 41473330 Query 36525 TACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCA 36584 | ||||| || | || ||| |||| ||||| || ||||| ||| |||| || ||| Sbjct 41473331 GGCTAAATCACTCCACCAAGTTTGCATTTACTATGCCATCACTTGCTACAAAGAAAACCA 41473390 Query 36585 ATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTG----ATA 36640 ||||| |||||||| | | || | || | || ||||| || || || Sbjct 41473391 GAACATGGGATATAAAATCTCTCTCCTCGGGCTTCAG-GGATTCC---CAGTGCCAAATG 41473446 Query 36641 TCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATA 36700 || || || | ||||| || ||| | ||||| || || || || ||||| |||||||| Sbjct 41473447 TCCTTGGACAGGTCCACCTCCTCCGCGGTCCAGAAGGAAGCTTCCGCCTTCTTATACATC 41473506 Query 36701 TTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 | |||||| ||||| || | | || || || ||||| Sbjct 41473507 TGCCAGATATCATGGTACTCGGTGGGGAAGATGACAAA 41473544 Score = 190 bits (210), Expect = 3e-43 Identities = 312/444 (70%), Gaps = 8/444 (2%) Strand=Plus/Minus Query 36170 CAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGG 36229 ||||||| |||||| || || ||||| | ||| |||||||| ||||| || ||||| || Sbjct 132680207 CAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGT 132680148 Query 36230 CCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACT 36289 || | || | ||||| ||||| ||||| || ||||||||||| | | ||| ||| Sbjct 132680147 CCTTGTTTCCTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGAAGGTGCTTTCCACT 132680088 Query 36290 GCCGCAAAGGCAATAAGTCTCTCTCCAT---AACCGGCACTGTCATGTATCC-ACTTTTG 36345 |||||||| || | ||||||| | | | ||| |||| || | Sbjct 132680087 AGGGCAAAGGCTGCAACACGTTCTCCATGGGTAACATCTTTGTTCCCAATCCAACACAAG 132680028 Query 36346 AGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtt 36405 | ||||| | |||||||| || |||| ||||||||| | || ||||| |||||| | | Sbjct 132680027 A-CCCAAACTGCCTTCTTCTTGACAC-AGGCATTGTTCCAATGGCATTGAAGAGAAATTC 132679970 Query 36406 tttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAAT 36465 |||| || |||||||| || ||| ||||| | ||||||| || || ||||| || Sbjct 132679969 CCTTTCTTTGTTATCTTTA--ATGTGTGTCAATAAGGAGACTATTTATGTCAGAATGTAT 132679912 Query 36466 GTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGT 36525 |||||| | || ||||| || || ||||| || | || |||||||| | |||| Sbjct 132679911 GTTTTCTGTAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTCTGTAATCTGAATTTCTTG 132679852 Query 36526 ACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAA 36585 | |||| |||| | || ||||||| ||||| || |||| |||||||| || |||| Sbjct 132679851 AACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATGCTGCAAAGAAAGCCAG 132679792 Query 36586 TACATGTTTTATAAAATATTTTTC 36609 | || |||||||||| |||| Sbjct 132679791 AATATAGGATATAAAATATCTTTC 132679768 >seq11 Length=132960392 Score = 170 bits (188), Expect = 3e-37 Identities = 167/215 (78%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 9218 TTTTAAACTTTATTTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATT 9277 |||||| ||| || |||||| | |||||| || | ||||||| |||| ||| ||||| Sbjct 61929149 TTTTAA---TTACTTTTTATTAACTGCTTCCAGAAACCGTAACAGGTGCAGGAATAGATT 61929205 Query 9278 GATGATATCCAAGTAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATG 9337 ||||||||||||||||| |||| | ||||| || || |||||||| || || ||||| Sbjct 61929206 GATGATATCCAAGTAGAGGCTGATGGCAGCTAATACGTACTCTTCAGGTGACAGTTTATG 61929265 Query 9338 TATTAGTGAGTGCGTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGA 9397 || | |||||| ||||||||||| |||||||| ||||| | |||||| || ||||| Sbjct 61929266 CATCATTGAGTGTGTGTCATAGATGATGAATCCACAGAAAAGAAGGGCTCCTGCAGCAGC 61929325 Query 9398 CAGGACCAGCTCCACTGTTTCACTTTGCACAAATA 9432 | ||||| ||||| ||| ||||| | | ||||| Sbjct 61929326 TAAGACCAACTCCATTGTCTCACTATAAAAAAATA 61929360 Score = 125 bits (138), Expect = 9e-24 Identities = 99/119 (83%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 9480 CCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGA 9539 || || |||| ||| |||||||| ||||| |||||||||||||| |||||| | ||| | Sbjct 61936977 CCAGCGCCAAATTTGCTGAAATCCCTCTTAGATTGTAGAGTATACACAGTCAAACCAAAA 61937036 Query 9540 AACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAAC 9598 || |||| ||||||||| ||||||||||||| || | || ||||||||||||||||| Sbjct 61937037 AATACTGTAGTAGTCAGTATGAAAGCTTGCAGAATAATATATACATCATAGAAAGTAAC 61937095 Score = 93.3 bits (102), Expect = 6e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 ||||||| |||||||| ||||| || ||||| |||||||||||||||||||||||||| Sbjct 61958282 CCATTCGGATGTGCACGCTGGCGGAGGCCACGCTGCTGCCATAGTTGAAGTCGTCCTCGA 61958341 Query 9907 TGGAGGAGCACGCGTA 9922 | |||||||| | ||| Sbjct 61958342 TCGAGGAGCAAGGGTA 61958357 >seq14 Length=124513186 Score = 114 bits (126), Expect = 2e-20 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 64906 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 64965 |||| ||||| || |||||||| || |||||| ||| | || || || || ||||||| Sbjct 61453820 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATAT 61453879 Query 64966 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 65025 ||| |||||| |||||||| ||||| || || || || || ||||| || | | || | Sbjct 61453880 TCAAAGATTGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCATCTTGAGAACGGTTT 61453939 Query 65026 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 65076 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 61453940 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 61453990 Score = 107 bits (118), Expect = 3e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240 || ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | Sbjct 61456673 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATG 61456732 Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300 ||||||||||| |||| || |||||||| || || || ||||| || || | | |||| Sbjct 61456733 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 61456792 Query 65301 CTATTTCTAAGACCGTA 65317 || ||||| | ||| || Sbjct 61456793 CTGTTTCTTATACCATA 61456809 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 66060 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGT 66119 ||||||||||| |||||||| |||||||||||||| | || | |||||||| | || Sbjct 61467730 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGCTGC 61467789 Query 66120 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGT 66179 || || |||||||| ||||| || | ||| ||||| | | || || ||||||| || Sbjct 61467790 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCAAGGC 61467849 Query 66180 TCCAAGTATATGGC 66193 |||| ||| || || Sbjct 61467850 TCCAGGTAAATAGC 61467863 Score = 87.8 bits (96), Expect = 2e-12 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858 |||| || | ||| |||||||||||||||| || || || || || || || || | | Sbjct 61485092 CACTGAACACTTTCTTTGTTTCTTTGTGTAAGTTAGAGACAGCAATCCTGGCTGCCAGGA 61485151 Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918 | ||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 61485152 TAGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 61485211 Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964 ||| || || || || ||| | || | |||||||| || ||||| Sbjct 61485212 GTTCCACTGTGGTGACCCCACTGTACAAGCCTTGGATTACTTTCAT 61485257 >seq8 Length=140346614 Score = 111 bits (122), Expect = 2e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 36182 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 36241 || ||||| || || | ||| |||||||| |||||||| ||||| || || | ||| || Sbjct 97934734 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCTTT 97934793 Query 36242 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 36300 ||||| ||||| | ||||| ||||| || ||||||||||||||||| || |||||||| Sbjct 97934794 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 97934852 >seq13 Length=104990034 Score = 104 bits (114), Expect = 3e-17 Identities = 95/120 (79%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 36418 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 36477 |||||| | || || ||||| | ||||||||||||||| ||||| |||||||| ||||| Sbjct 9461211 ATCTTTTATGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGC 9461152 Query 36478 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 36537 ||||| || || |||||||| | || || |||||||| |||||| | |||||| || Sbjct 9461151 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 9461092 >seq12 Length=128289686 Score = 98.7 bits (108), Expect = 1e-15 Identities = 155/218 (71%), Gaps = 7/218 (3%) Strand=Plus/Minus Query 33939 ATCTAGAGATTGTACTTCTTTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGC 33998 ||| | || ||| ||||||| | |||||||||| | || |||| | || ||||| || Sbjct 60586989 ATCCAAAGCTTGAACTTCTTCTATTTCTGGATAAAAAATGCGTTCGCAAATGAGCTGTGC 60586930 Query 33999 TATTCTATCCCCCGTATTTACATTGAA--TGTACATTTTCCATTATTAATAAGAATGACT 34056 |||| ||| ||| | || || ||||| | | | ||| ||| ||||| || | || Sbjct 60586929 AATTCGATCACCCTTTTTGAC-TTGAAACTTTTC-TTTGCCAAAATTAAACAGTACAACA 60586872 Query 34057 CCTATATTTCCCCTATAATCTTCGTCTATTACACCGCCTCCTATATCAATA---CCTTTT 34113 || | |||||| ||||||||||| | ||| ||||| |||||| ||||||| |||| Sbjct 60586871 CCAACATTTCCTCTATAATCTTCATTTATGACACCAGCTCCTACATCAATAAAGTGTTTT 60586812 Query 34114 AGGGACAGACCAGACCTAGGAGCTATTCTACCATAGCA 34151 | || || |||| ||||||| ||| ||||| || Sbjct 60586811 GCAGCCAAGCCTGACCGTGGAGCTACTCTTCCATAACA 60586774 >SEQ44210 Length=79069 Score = 86.0 bits (94), Expect = 8e-12 Identities = 149/216 (69%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 33939 ATCTAGAGATTGTACTTCTTTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGC 33998 ||| | || ||| ||||||| | |||||||||| | || |||| | || || || || Sbjct 9507 ATCCAAAGCTTGAACTTCTTCTATTTCTGGATAAAAAATCCGTTCGCAAATGAGTTGTGC 9566 Query 33999 TATTCTATCCCCCGTATTTACATTGAATGTACATTTTCCATTATTAATAAGAATGACTCC 34058 |||| ||| ||| | || || | || | ||| ||| ||||| || | || || Sbjct 9567 AATTCGATCACCCTTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACC 9626 Query 34059 TATATTTCCCCTATAATCTTCGTCTATTACACCGCCTCCTATATCAATA---CCTTTTAG 34115 | |||||| ||||||||||| ||||| ||||| |||||| |||| || ||| Sbjct 9627 AACATTTCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCAGTAAAGTGATTTGC 9686 Query 34116 GGACAGACCAGACCTAGGAGCTATTCTACCATAGCA 34151 | || || |||| ||||||| ||| ||||| || Sbjct 9687 AGCCAAGCCTGACCCTGGAGCTACTCTTCCATAACA 9722 >seq9 Length=125784921 Score = 86.0 bits (94), Expect = 8e-12 Identities = 146/210 (70%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 33900 TCCGGTTGATCCAAACCCT--TGATCTCCTCTATCTGTACTATCTAGAGATTGTACTTCT 33957 ||| || || ||||| ||| ||| | ||| || ||| ||| | || ||| |||||| Sbjct 85039906 TCCAGTGGAACCAAAACCTCCTGAACCCCTTTAGGTGTC--ATCCAAAGCTTGAACTTCT 85039963 Query 33958 TTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCCCCCGTATTT 34017 | | ||| |||||| | || |||| | || ||||| || |||| ||| | | | || Sbjct 85039964 TCTATTTCCGGATAAAAAATCCGTTCGCAAATGAGCTGTGCAATTCGATCACACTTTTTG 85040023 Query 34018 ACATTGAATGTACATTTTCCATTATTAATAAGAATGACTCCTATATTTCCCCTATAATCT 34077 || | || | ||| ||| |||| || | || || | |||||| ||||||||| Sbjct 85040024 ACTTCAAACTTTTCTTTGCCAAAGTTAAACAGTACAACACCAACATTTCCTCTATAATCT 85040083 Query 34078 TCGTCTATTACACCGCCTCCTATATCAATA 34107 || ||||| ||||| |||||| ||||||| Sbjct 85040084 TCATCTATGACACCAGCTCCTACATCAATA 85040113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657652563764560