Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq21 329 5e-85 seq14 120 4e-22 seq13 116 5e-21 seq8 111 2e-19 seq12 102 1e-16 seq19 98.7 1e-15 SEQ44210 93.3 6e-14 seq9 93.3 6e-14 >seq21 Length=143691637 Score = 329 bits (364), Expect = 5e-85 Identities = 640/938 (68%), Gaps = 24/938 (3%) Strand=Plus/Plus Query 49613 TTTAAAAGTCAACATCTAGAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTT 49669 |||| |||||| |||| | | |||| ||| ||| | || |||| |||||||| Sbjct 41472621 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGATTCGACACCACTCCCATCC 41472680 Query 49670 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 49729 | || || || || | || || || || || || |||| | ||| ||||| | Sbjct 41472681 TCTGATACTCCTTTACTCTCTTCTCAAAGAAGTTCGTCTTTC-----AGTGAAATATTCT 41472735 Query 49730 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 49789 |||| || ||||| || || || | ||| || |||| |||| ||| | || Sbjct 41472736 CCATAAAGTCAAATGGGTTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCGGCATG- 41472794 Query 49790 ATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 49849 ||| || || ||| | || || ||| ||||| | |||||||| || || || | Sbjct 41472795 -TCTGTCTGCCACAGACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 41472853 Query 49850 TAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAG 49909 | || || | ||| |||| || ||||| ||||| || | || |||| | || | Sbjct 41472854 TCACAGGCAAGGCCTCAGTGAGGAATTCCTGTTCTATCCAAACAGCATTGATAATTCTTT 41472913 Query 49910 ATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAAT 49969 ||| | | || || ||| || | | || || ||||||| || || |||| Sbjct 41472914 CTCTTATTCTCTCCTCCAATGGTTTGTGTACCAGGTGATTGAACATCAGGCAGGCAAAAT 41472973 Query 49970 CGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTA 50029 | ||||| | |||||| |||| |||||| ||||| |||||||| ||||| || ||||| | Sbjct 41472974 CACAGTGTAAACCCTCATCTCCACTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCATCA 41473033 Query 50030 GGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTA 50089 | || || || || ||||| ||||| || ||||| | |||||||||| | ||||| Sbjct 41473034 GTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAAGATG---CCTTCCG 41473090 Query 50090 CTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGC-GCT--GTCATGTATCCACTTTT 50146 |||| |||||| | |||| | || ||||| | || ||| ||| ||||| | Sbjct 41473091 CTGCAGCAAAGACTACAACACGTTCCCCATAGGTAGCTGCTTTGTCCCCAATCCAGTGCA 41473150 Query 50147 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGt 50206 |||||||| |||||||| || ||||||||||||||||| |||||||| ||| || | | Sbjct 41473151 AGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGCGAAATT 41473210 Query 50207 ttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAA 50266 |||| || |||||| | ||||| || || | | |||||||||| | ||||| | Sbjct 41473211 CCCTTTCTTTGGGATCTTTTATGTAAGTGTCAATAAGGAAACTATACATTCCAGAATGTA 41473270 Query 50267 TGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTG 50326 ||||||| ||||| || || || || ||||||| | || || || | ||| |||||| Sbjct 41473271 TGTTTTCCATGGCAATTTGGAAGCCACAGAAACAGCGGGCTTCTGTCACCTGAACTTCTT 41473330 Query 50327 TACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCA 50386 | ||||| || | || ||| |||| ||||| || ||||| ||| |||| || ||| Sbjct 41473331 GGCTAAATCACTCCACCAAGTTTGCATTTACTATGCCATCACTTGCTACAAAGAAAACCA 41473390 Query 50387 ATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTG----ATA 50442 ||||| |||||||| | | || | ||| | || ||||| || || || Sbjct 41473391 GAACATGGGATATAAAATCTCTCTCCTCGGGCTTCAG-GGATTCC---CAGTGCCAAATG 41473446 Query 50443 TCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATA 50502 || || || | || || || ||| | ||||| || || || || ||||| |||||||| Sbjct 41473447 TCCTTGGACAGGTCCACCTCCTCCGCGGTCCAGAAGGAAGCTTCCGCCTTCTTATACATC 41473506 Query 50503 TTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 | |||||| ||||| || | | | ||||| || ||||| Sbjct 41473507 TGCCAGATATCATGGTACTCGGTGGGGAAGATGACAAA 41473544 Score = 190 bits (210), Expect = 3e-43 Identities = 313/445 (70%), Gaps = 10/445 (2%) Strand=Plus/Minus Query 49972 CAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGG 50031 ||||| | |||||| || || ||||| ||||| |||||||| ||||| || ||||| || Sbjct 132680207 CAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGT 132680148 Query 50032 CCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACT 50091 || | || | ||||| ||||| ||||| || |||||||||||| | | ||| ||| Sbjct 132680147 CCTTGTTTCCTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGAAGGTGCTTTCCACT 132680088 Query 50092 GCGGCAAAGGCAACAAGTCTCTCTCCA----TAACTGGCGCTGTCATGTATCC-ACTTTT 50146 ||||||||| ||| | |||||| |||| | ||| |||| || Sbjct 132680087 AGGGCAAAGGCTGCAACACGTTCTCCATGGGTAAC-ATCTTTGTTCCCAATCCAACACAA 132680029 Query 50147 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGt 50206 || ||||| | |||||||| || |||| |||||| ||| | |||||||| |||||| | | Sbjct 132680028 GA-CCCAAACTGCCTTCTTCTTGACAC-AGGCATTGTTCCAATGGCATTGAAGAGAAATT 132679971 Query 50207 ttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAA 50266 |||| || |||||||| || || || || | ||||||| || || ||||| | Sbjct 132679970 CCCTTTCTTTGTTATCTTTA--ATGTGTGTCAATAAGGAGACTATTTATGTCAGAATGTA 132679913 Query 50267 TGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTG 50326 ||||||| | || || || || || ||||| || | || |||||||| | |||| Sbjct 132679912 TGTTTTCTGTAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTCTGTAATCTGAATTTCTT 132679853 Query 50327 TACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCA 50386 | |||| |||| | || ||||||| ||||| || |||| |||||||| || |||| Sbjct 132679852 GAACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATGCTGCAAAGAAAGCCA 132679793 Query 50387 ATACATGTTTTATAAAATGTTTTTC 50411 | || |||||||| | |||| Sbjct 132679792 GAATATAGGATATAAAATATCTTTC 132679768 >seq14 Length=124513186 Score = 120 bits (132), Expect = 4e-22 Identities = 129/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844 |||| |||||||| |||||||| || |||||| ||| | || || || || ||||||| Sbjct 61453820 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATAT 61453879 Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904 ||| |||||| |||||||| ||||| || || || || || ||||| || | | || | Sbjct 61453880 TCAAAGATTGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCATCTTGAGAACGGTTT 61453939 Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 78955 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 61453940 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 61453990 Score = 109 bits (120), Expect = 8e-19 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 79935 CTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 79994 || |||||||||||| |||||||| |||||||||||||| | || |||||||||| | Sbjct 61467726 CTCTACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACG 61467785 Query 79995 ATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 80054 ||||| || |||||||| ||||| || | ||| ||||| | | || || ||||||| Sbjct 61467786 CTGCTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCA 61467845 Query 80055 CGGTTCCAAGTATATGGC 80072 || |||| ||| || || Sbjct 61467846 AGGCTCCAGGTAAATAGC 61467863 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 79060 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACC 79119 || ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | Sbjct 61456673 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATG 61456732 Query 79120 GATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAA 79179 || |||||||| |||| || |||||||| || || || ||||| || || | | |||| Sbjct 61456733 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 61456792 Query 79180 CTATTTCTAAGACCGTA 79196 || ||||| | ||| || Sbjct 61456793 CTGTTTCTTATACCATA 61456809 >seq13 Length=104990034 Score = 116 bits (128), Expect = 5e-21 Identities = 100/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| ||||| || || ||||| |||||||| ||||| || ||||| || || || || | Sbjct 9463322 CCTCATCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 9463263 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||||| ||||| || ||||| || || ||||||||||| ||||| ||||| ||||||| Sbjct 9463262 TGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 9463203 Query 50102 CAAC 50105 | || Sbjct 9463202 CTAC 9463199 Score = 100 bits (110), Expect = 4e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 50220 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 50279 |||||| | ||||| || || | ||||||||||||||| ||||| |||||||| ||||| Sbjct 9461211 ATCTTTTATGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGC 9461152 Query 50280 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 50339 || || || || |||||||| | || || |||||||| |||||| | |||||| || Sbjct 9461151 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 9461092 >seq8 Length=140346614 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 49984 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 50043 || ||||| || || ||||| |||||||| |||||||| ||||| || || | ||| || Sbjct 97934734 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCTTT 97934793 Query 50044 AGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCA 50103 ||||| ||||| | ||||| || || || ||||| ||||||||||| || |||||||| Sbjct 97934794 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGCC 97934853 Query 50104 ACAAGTCTCTCTCC 50117 || | ||| || || Sbjct 97934854 ACCACTCTTTCCCC 97934867 >seq12 Length=128289686 Score = 102 bits (112), Expect = 1e-16 Identities = 176/255 (69%), Gaps = 3/255 (1%) Strand=Plus/Minus Query 47703 TCCAGTTGATCCAAACCCTTGAGCTCCTCTATCTGTACTATCTAGAGATTGTACTTCCTC 47762 |||||| || ||||| || | || || || || ||| | || ||| ||||| || Sbjct 60587028 TCCAGTGGAACCAAAACCACCTGAACCCCTTTCGGTGTCATCCAAAGCTTGAACTTCTTC 60586969 Query 47763 CAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCTCCCGTATTTAC 47822 | |||||||||| | || |||| | || ||||| || |||| ||| ||| | || || Sbjct 60586968 TATTTCTGGATAAAAAATGCGTTCGCAAATGAGCTGTGCAATTCGATCACCCTTTTTGAC 60586909 Query 47823 ATTGAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAATCTTC 47882 | ||| | ||| ||| ||||| || | || || | ||||| ||||||||||| Sbjct 60586908 TTGAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAACATTTCCTCTATAATCTTC 60586849 Query 47883 GTCTATTACACCACCTCCTATATCAAT---GCCTTTTAGTGACAGTCCAGACCTAGGAGC 47939 | ||| |||||| |||||| |||||| | |||| | || || |||| ||||| Sbjct 60586848 ATTTATGACACCAGCTCCTACATCAATAAAGTGTTTTGCAGCCAAGCCTGACCGTGGAGC 60586789 Query 47940 TATTCTACCATAGCA 47954 || ||| ||||| || Sbjct 60586788 TACTCTTCCATAACA 60586774 >seq19 Length=51387494 Score = 98.7 bits (108), Expect = 1e-15 Identities = 178/255 (70%), Gaps = 9/255 (4%) Strand=Plus/Minus Query 47703 TCCAGTTGATCCAAACCCT--TGAGCTCCTCTATCTGTACTATCTAGAGATTGTACTTCC 47760 |||||| || ||||| ||| ||||| ||| | ||| ||| | || ||| ||||| Sbjct 45564561 TCCAGTAGAACCAAAACCTCCTGAGCCCCTTTTGGTGTC--ATCCAAAGCTTGAACTTCT 45564504 Query 47761 TCCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCTCCCGTATTT 47820 || | ||||||||| | || |||| | | || ||||| || |||| ||| | ||||| Sbjct 45564503 TCTATTTCTGGATAGAACATCCGTTCACAAATGAGCTGTGCAATTCGATCACGT-TATTT 45564445 Query 47821 -ACATTGAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAATC 47879 || | ||| | ||| ||| ||||| | | || || || ||||| |||||||| Sbjct 45564444 GACTTCAAACTTTTCTTTGCCAAAATTAAAGACTACAACACCAATATTTCCTCTATAATC 45564385 Query 47880 TTCGTCTATTACACCACCTCCTATAT---CAATGCCTTTTAGTGACAGTCCAGACCTAGG 47936 ||| ||| | |||||| |||||| || ||| | |||| | || ||||||| || Sbjct 45564384 TTCATCTGTGACACCAGCTCCTACATCTACAAAGTGTTTTGCAGCCAAGCCAGACCGTGG 45564325 Query 47937 AGCTATTCTACCATA 47951 ||||| ||| ||||| Sbjct 45564324 AGCTACTCTTCCATA 45564310 >SEQ44210 Length=79069 Score = 93.3 bits (102), Expect = 6e-14 Identities = 174/255 (68%), Gaps = 3/255 (1%) Strand=Plus/Plus Query 47703 TCCAGTTGATCCAAACCCTTGAGCTCCTCTATCTGTACTATCTAGAGATTGTACTTCCTC 47762 |||||| || ||||| || | || || || || ||| | || ||| ||||| || Sbjct 9468 TCCAGTGGAACCAAAACCGCCTGAACCCCTTTCGGTGTCATCCAAAGCTTGAACTTCTTC 9527 Query 47763 CAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCTCCCGTATTTAC 47822 | |||||||||| | || |||| | || || || || |||| ||| ||| | || || Sbjct 9528 TATTTCTGGATAAAAAATCCGTTCGCAAATGAGTTGTGCAATTCGATCACCCTTTTTGAC 9587 Query 47823 ATTGAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAATCTTC 47882 | ||| | ||| ||| ||||| || | || || | ||||| ||||||||||| Sbjct 9588 TTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAACATTTCCTCTATAATCTTC 9647 Query 47883 GTCTATTACACCACCTCCTATATC---AATGCCTTTTAGTGACAGTCCAGACCTAGGAGC 47939 ||||| |||||| |||||| ||| || | ||| | || || |||| ||||| Sbjct 9648 ATCTATGACACCAGCTCCTACATCAGTAAAGTGATTTGCAGCCAAGCCTGACCCTGGAGC 9707 Query 47940 TATTCTACCATAGCA 47954 || ||| ||||| || Sbjct 9708 TACTCTTCCATAACA 9722 >seq9 Length=125784921 Score = 93.3 bits (102), Expect = 6e-14 Identities = 147/209 (70%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 47703 TCCAGTTGATCCAAACCCT--TGAGCTCCTCTATCTGTACTATCTAGAGATTGTACTTCC 47760 |||||| || ||||| ||| ||| | ||| || ||| ||| | || ||| ||||| Sbjct 85039906 TCCAGTGGAACCAAAACCTCCTGAACCCCTTTAGGTGTC--ATCCAAAGCTTGAACTTCT 85039963 Query 47761 TCCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCTCCCGTATTT 47820 || | ||| |||||| | || |||| | || ||||| || |||| ||| | | | || Sbjct 85039964 TCTATTTCCGGATAAAAAATCCGTTCGCAAATGAGCTGTGCAATTCGATCACACTTTTTG 85040023 Query 47821 ACATTGAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAATCT 47880 || | ||| | ||| ||| |||| || | || || | ||||| ||||||||| Sbjct 85040024 ACTTCAAACTTTTCTTTGCCAAAGTTAAACAGTACAACACCAACATTTCCTCTATAATCT 85040083 Query 47881 TCGTCTATTACACCACCTCCTATATCAAT 47909 || ||||| |||||| |||||| |||||| Sbjct 85040084 TCATCTATGACACCAGCTCCTACATCAAT 85040112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717701062383760