Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq12 120 3e-22 seq1 116 3e-21 seq9 102 7e-17 >seq12 Length=128289686 Score = 120 bits (132), Expect = 3e-22 Identities = 179/254 (70%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 5270 TCGGTGTCGTCCAAGCGGTTAACCTCTTGAACTGCTGGGTGCGATATGCGTTCGCATATT 5329 |||||||| ||||| | ||| |||| | | |||| | | ||||||||||| || Sbjct 60586997 TCGGTGTCATCCAAAGCTTGAACTTCTTCTATTTCTGGATAAAAAATGCGTTCGCAAATG 60586938 Query 5330 AGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAAGTTAAACAGC 5389 ||||| || || | || ||||| || || | ||| | || || || |||||||| Sbjct 60586937 AGCTGTGCAATTCGATCACCCTTTTTGACTTGAAACTTTTCTTTGCCAAAATTAAACAGT 60586878 Query 5390 ACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCACGTCGATAAAG 5449 || || || ||||| |||| || ||||| | || || ||||| || || || |||||| Sbjct 60586877 ACAACACCAACATTTCCTCTATAATCTTCATTTATGACACCAGCTCCTACATCAATAAAG 60586818 Query 5450 TGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTAGCAACCAGGTGGGAGCTTT 5509 ||||| | || | ||| || ||||| |||| | ||| || || |||| |||||| | Sbjct 60586817 TGTTTTGCAGCCAAGCCTGACCGTGGAGCTACTCTTCCATAACACCCAGAAGGGAGCGCT 60586758 Query 5510 ATCAGAAGGTCAGT 5523 ||| ||| ||| || Sbjct 60586757 ATCTGAATGTCCGT 60586744 >seq1 Length=217458864 Score = 116 bits (128), Expect = 3e-21 Identities = 117/152 (77%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933 || ||||| || ||||| || | ||||||||||| ||||||||| |||| ||||||||| Sbjct 153865192 GGTTACCTGGGCTGCCAAGCCTTGTCTGAGATGATCCAGTTTTACCTGGAGGAGGTGATG 153865251 Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993 || || || || || |||| || |||||||| ||||| || ||||| ||||| || || Sbjct 153865252 CCCCAAGCTGAGAACCACGACCCAGACATCAAGGAGCATGTGAACTCCCTGGGGGAGAAT 153865311 Query 128994 CTCAAAACGCTGCGTCTTCGACTGCGTCGCTG 129025 || || || || | || | ||||| ||||| Sbjct 153865312 CTGAAGACCCTCAGGCTGAGGCTGCGGCGCTG 153865343 Score = 82.4 bits (90), Expect = 7e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 129104 AGGCGTTTACAAGGCCATGAGCGAGTTCGACATATTCATCAACTACATAGAATCATACAT 129163 |||||| ||||| |||||||| ||||| ||||| |||||||||||||||||| | ||||| Sbjct 153867587 AGGCGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACATAGAAGCCTACAT 153867646 Query 129164 GAC 129166 ||| Sbjct 153867647 GAC 153867649 >seq9 Length=125784921 Score = 102 bits (112), Expect = 7e-17 Identities = 175/253 (69%), Gaps = 1/253 (0%) Strand=Plus/Plus Query 5272 GGTGTCGTCCAAGCGGTTAACCTCTTGAACTGCTGGGTGCGATATGCGTTCGCATATTAG 5331 |||||| ||||| | ||| |||| | | | || | | || |||||||| || || Sbjct 85039939 GGTGTCATCCAAAGCTTGAACTTCTTCTATTTCCGGATAAAAAATCCGTTCGCAAATGAG 85039998 Query 5332 CTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAAGTTAAACAGCAC 5391 ||| || || | || | ||| || || ||||| | || || ||||||||||| || Sbjct 85039999 CTGTGCAATTCGATCACACTTTTTGACTTCAAACTTTTCTTTGCCAAAGTTAAACAGTAC 85040058 Query 5392 CACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCACGTCGATAAAGTG 5451 || || ||||| |||| || ||||| || || || ||||| || || || |||||||| Sbjct 85040059 AACACCAACATTTCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCAATAAAGTG 85040118 Query 5452 -TTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTAGCAACCAGGTGGGAGCTTTA 5510 |||| || | ||| || |||| ||| | ||| || || |||| |||||| || Sbjct 85040119 TTTTGCAAGCCAAGCCTGACTGTGGAGCTCCTCTTCCATAACACCCAGAAGGGAGCGCTA 85040178 Query 5511 TCAGAAGGTCAGT 5523 || ||| ||| || Sbjct 85040179 TCTGAATGTCCGT 85040191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447396486890080