Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq4 176 7e-40 SEQ54981 131 3e-26 seq1 131 3e-26 >seq4 Length=166074386 Score = 176 bits (194), Expect = 7e-40 Identities = 199/267 (75%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||||||||||||| | | || || ||||| || || ||||| |||||||| ||| Sbjct 26295016 GCTAAGCGTCATCGCAAGGTTTTGCGGGACAACATTCAGGGCATCACTAAGCCAGCCATC 26294957 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || || || |||||||| || || ||||||||| | ||||| | ||||||| |||| Sbjct 26294956 CGGCGCCTTGCTCGTCGCGGCGGTGTCAAGCGTATTTCTGGCCTTATCTATGAGGAGACC 26294897 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| |||| ||||| | ||||| ||| ||| || | |||||| || || || ||| Sbjct 26294896 CGTGGTGTTCTGAAGGTGTTCCTGGAGAACGTGATTCGTGATGCAGTCACTTACACGGAG 26294837 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || |||||||| |||||||| || | |||||| | |||||||| |||| || || || Sbjct 26294836 CATGCTAAACGCAAGACTGTAACAGCAATGGATGTGGTCTATGCGCTGAAGCGACAGGGA 26294777 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | |||| || || || ||||| Sbjct 26294776 CGCACTCTTTACGGCTTCGGTGGTTAA 26294750 Score = 154 bits (170), Expect = 2e-33 Identities = 190/260 (73%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| || |||| | || || || |||||||| || |||||||||||||| ||| Sbjct 26905594 GCCAAGCGCCACCGCAAAGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCAGCCATC 26905653 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || || || ||||| || || || || ||||| |||| || | ||||||| |||| Sbjct 26905654 CGGCGCCTTGCTCGCCGCGGCGGCGTGAAGCGCATCTCCGGCCTCATCTATGAGGAGACC 26905713 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || ||||| ||||||| ||| ||| |||| || || | ||| || ||| Sbjct 26905714 CGCGGGGTGCTGAAGGTCTTCCTGGAGAACGTGATCCGGGACGCCGTGACCTACACGGAG 26905773 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || ||||| |||||| ||||||| | |||||||| |||| || || ||| Sbjct 26905774 CACGCCAAGCGCAAGACGGTCACCGCCATGGACGTAGTCTATGCGCTGAAGCGCCAGGGC 26905833 Query 16673 CGTAAGATTTATGGTTTTGG 16692 || | ||||||| || || Sbjct 26905834 CGCACCCTTTATGGCTTCGG 26905853 Score = 150 bits (166), Expect = 3e-32 Identities = 192/262 (73%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| | | || || || || ||||||||||||||||||||||| | Sbjct 26202439 CGCCAAGCGTCACCGCA-AGGTGTTGCGCGACAATATCCAAGGAATCACCAAGCCAGCCA 26202381 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| || |||||||| || || || ||||||||| | ||||| | ||||||| |||| Sbjct 26202380 TCCGGCGCCTGGCTCGCCGCGGCGGCGTCAAGCGTATTTCTGGCCTCATCTATGAGGAGA 26202321 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 ||| | || ||||| | || || | | || |||| |||||| || ||| || | Sbjct 26202320 CTCGCGGAGTGCTGAAGGTTTTTCTGGAAAATGTAATCCGCGATGCTGTCACCTACACGG 26202261 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| ||||| ||||| ||||| ||||||| | || || || | || || || | Sbjct 26202260 AGCACGCCAAACGCAAGACGGTCACAGCCATGGACGTGGTGTACGCGCTCAAGCGCCAGG 26202201 Query 16671 GCCGTAAGATTTATGGTTTTGG 16692 | || | | ||||| || || Sbjct 26202200 GACGCACTCTGTATGGCTTCGG 26202179 Score = 150 bits (166), Expect = 3e-32 Identities = 194/268 (72%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| || |||| || || || |||||||| || ||||||||||| || || Sbjct 27611743 CGCTAAGCGCCACCGCAAGGTGCTGCGTGACAACATCCAGGGCATCACCAAGCCGGCCAT 27611684 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || || ||||| || || || || ||||| ||||||| | |||| || |||| Sbjct 27611683 CCGGCGCCTTGCTCGCCGCGGCGGCGTGAAGCGCATCTCTGGCCTCATCTACGAGGAGAC 27611624 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| || |||| ||||||| ||| ||| |||| || ||| | ||| || || Sbjct 27611623 CCGTGGGGTGCTGAAAGTCTTCCTGGAGAACGTGATCCGGGACGCTGTGACCTACACGGA 27611564 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| |||||| |||||||| | || ||||| |||| || || || Sbjct 27611563 GCACGCCAAGCGCAAGACAGTCACCGCCATGGATGTGGTTTATGCGCTGAAGCGCCAGGG 27611504 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | | || ||||| || ||||| Sbjct 27611503 TCGCACCCTCTACGGTTTCGGCGGTTAA 27611476 Score = 147 bits (162), Expect = 3e-31 Identities = 189/261 (72%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| || |||| || || || |||||||| || ||||||||||| || || Sbjct 27607158 CGCTAAGCGCCACCGCAAGGTGCTGCGTGACAACATCCAGGGCATCACCAAGCCGGCCAT 27607217 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || || ||||| || || || || ||||| ||||||| | |||| || |||| Sbjct 27607218 CCGGCGCCTTGCTCGCCGCGGCGGCGTGAAGCGCATCTCTGGCCTCATCTACGAGGAGAC 27607277 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| || |||| ||||||| ||| ||| |||| || ||| | ||| || || Sbjct 27607278 CCGTGGGGTGCTGAAAGTCTTCCTGGAGAACGTGATCCGGGACGCTGTGACCTACACGGA 27607337 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| |||||| |||||||| | || ||||| |||| || || || Sbjct 27607338 GCACGCCAAGCGCAAGACAGTCACCGCCATGGATGTGGTTTATGCGCTGAAGCGCCAGGG 27607397 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 || | | || ||||| || Sbjct 27607398 TCGCACCCTCTACGGTTTCGG 27607418 Score = 143 bits (158), Expect = 4e-30 Identities = 199/279 (71%), Gaps = 0/279 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || || | | || || |||||||||||||| ||||| ||||| ||||| Sbjct 26040025 CGCCAAGCGCCACCGGAAAGTGCTGCGGGATAACATCCAAGGCATCACTAAGCCGGCTAT 26039966 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | || || ||| | |||||||| || || || |||| || ||| | || || |||| Sbjct 26039965 TAGGCGCCTTGCTAGGCGTGGTGGGGTTAAACGGATCTCCGGTTTGATTTACGAGGAGAC 26039906 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | |||| | ||| | || || ||| ||| |||| || || | |||||| || Sbjct 26039905 CCGAGGTGTTCTCAAGGTTTTTCTGGAGAACGTGATCCGGGACGCCGTGACCTATACGGA 26039846 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||||||||| |||||||| | || || || | || || ||||| Sbjct 26039845 GCACGCCAAGCGCAAGACTGTCACTGCCATGGATGTGGTTTACGCGCTCAAGCGCCAAGG 26039786 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTTCTAATCA 16710 || | | || ||||| || |||||| || || ||| Sbjct 26039785 ACGCACTCTATACGGTTTCGGCGGTTAATATTTTAGTCA 26039747 Score = 134 bits (148), Expect = 2e-27 Identities = 188/261 (72%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| | | || || || |||||||| || ||||||||||| || || Sbjct 26034672 GCCAAGCGCCACCGCA-AGGTGTTGCGCGACAACATCCAGGGCATCACCAAGCCGGCCAT 26034730 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || |||||||| || ||||| || |||||| | ||||||| || |||| || |||| Sbjct 26034731 TCGGCGTCTGGCCCGGCGTGGAGGTGTCAAGAGGATCTCTGGTCTGATCTACGAGGAGAC 26034790 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | || | ||| | || | ||| ||| |||| ||| ||| || |||||| || Sbjct 26034791 TCGCGGGGTGCTCAAGGTGTTTTTGGAGAACGTGATCCGTGACGCTGTCACCTATACGGA 26034850 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || || ||||| ||||| | ||||| | ||||| || | || || || || Sbjct 26034851 ACACGCCAAGCGCAAGACGGTCACTGCTATGGACGTGGTCTACGCGCTCAAGCGCCAGGG 26034910 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 || | ||||||| ||||| Sbjct 26034911 ACGCACCCTTTATGGCTTTGG 26034931 Score = 105 bits (116), Expect = 1e-18 Identities = 180/261 (69%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| || |||| | || || || || || || || |||||||||||||| || Sbjct 27654702 CGCTAAGCGCCACCGCAAAGTCCTGCGCGACAATATTCAGGGTATCACCAAGCCAGCCAT 27654643 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || ||||| || ||||| || || ||||| |||| || | | || || |||| Sbjct 27654642 CCGACGCCTGGCACGGCGTGGAGGCGTTAAGCGCATCTCAGGCCTTATATACGAGGAGAC 27654583 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| | ||| | || | ||| || |||| ||||| | ||| || || Sbjct 27654582 GCGCGGAGTTCTTAAGGTATTTTTGGAGAATGTGATCCGCGATGCAGTTACCTACACGGA 27654523 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 || || ||||| ||||| ||||| ||||||| | || || || | || || || || Sbjct 27654522 ACATGCCAAACGCAAGACAGTCACGGCCATGGACGTGGTTTACGCGCTCAAGCGCCAGGG 27654463 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 || | | ||||| ||||| Sbjct 27654462 TCGCACCCTCTATGGCTTTGG 27654442 >SEQ54981 Length=49112 Score = 131 bits (144), Expect = 3e-26 Identities = 177/244 (73%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||||||||| || |||| | || || |||| ||||| || || ||||||||||| || | Sbjct 11599 CGCTAAGCGCCACCGCAAGGTC-CTGAGAGACAACATTCAGGGCATCACCAAGCCTGCCA 11657 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 | || ||||| ||||| ||||| || || ||||| ||||||| | | || || |||| Sbjct 11658 TTCGGCGTCTAGCTCGGCGTGGCGGCGTTAAGCGGATCTCTGGCCTCATTTACGAGGAGA 11717 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | ||| ||||| | ||||| ||| ||| || | || || || ||| |||| Sbjct 11718 CCCGCGGTGTGCTGAAGGTGTTCCTGGAGAACGTGATTCGGGACGCAGTCACCTACACCG 11777 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| ||||| |||||||| | || || || | || || || | Sbjct 11778 AGCACGCCAAGCGCAAGACCGTCACAGCCATGGATGTGGTGTACGCGCTCAAGCGCCAGG 11837 Query 16671 GCCG 16674 | || Sbjct 11838 GGCG 11841 Score = 131 bits (144), Expect = 3e-26 Identities = 177/244 (73%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||||||||| || |||| | || || |||| ||||| || || ||||||||||| || | Sbjct 37514 CGCTAAGCGCCACCGCAAGGTC-CTGAGAGACAACATTCAGGGCATCACCAAGCCTGCCA 37456 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 | || ||||| ||||| ||||| || || ||||| ||||||| | | || || |||| Sbjct 37455 TTCGGCGTCTAGCTCGGCGTGGCGGCGTTAAGCGGATCTCTGGCCTCATTTACGAGGAGA 37396 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | ||| ||||| | ||||| ||| ||| || | || || || ||| |||| Sbjct 37395 CCCGCGGTGTGCTGAAGGTGTTCCTGGAGAACGTGATTCGGGACGCAGTCACCTACACCG 37336 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| ||||| |||||||| | || || || | || || || | Sbjct 37335 AGCACGCCAAGCGCAAGACCGTCACAGCCATGGATGTGGTGTACGCGCTCAAGCGCCAGG 37276 Query 16671 GCCG 16674 | || Sbjct 37275 GGCG 37272 >seq1 Length=217458864 Score = 131 bits (144), Expect = 3e-26 Identities = 177/244 (73%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||||||||| || |||| | || || |||| ||||| || || ||||||||||| || | Sbjct 120124524 CGCTAAGCGCCACCGCAAGGTC-CTGAGAGACAACATTCAGGGCATCACCAAGCCTGCCA 120124582 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 | || ||||| ||||| ||||| || || ||||| ||||||| | | || || |||| Sbjct 120124583 TTCGGCGTCTAGCTCGGCGTGGCGGCGTTAAGCGGATCTCTGGCCTCATTTACGAGGAGA 120124642 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | ||| ||||| | ||||| ||| ||| || | || || || ||| |||| Sbjct 120124643 CCCGCGGTGTGCTGAAGGTGTTCCTGGAGAACGTGATTCGGGACGCAGTCACCTACACCG 120124702 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| ||||| |||||||| | || || || | || || || | Sbjct 120124703 AGCACGCCAAGCGCAAGACCGTCACAGCCATGGATGTGGTGTACGCGCTCAAGCGCCAGG 120124762 Query 16671 GCCG 16674 | || Sbjct 120124763 GGCG 120124766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79017384711162