Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq21 329 4e-85 seq8 116 5e-21 seq14 114 2e-20 seq13 114 2e-20 seq12 100 4e-16 seq19 95.1 2e-14 SEQ44210 91.5 2e-13 seq9 87.8 2e-12 >seq21 Length=143691637 Score = 329 bits (364), Expect = 4e-85 Identities = 639/938 (68%), Gaps = 24/938 (3%) Strand=Plus/Plus Query 32957 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTT 33013 |||| |||||| |||| || | |||| ||| ||| | || |||| |||||||| Sbjct 41472621 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGATTCGACACCACTCCCATCC 41472680 Query 33014 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33073 | || || || || | || || || || || || |||| | ||| ||||| | Sbjct 41472681 TCTGATACTCCTTTACTCTCTTCTCAAAGAAGTTCGTCTTTC-----AGTGAAATATTCT 41472735 Query 33074 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 33133 |||| || ||||| || || || | ||| || |||| |||| ||| | || Sbjct 41472736 CCATAAAGTCAAATGGGTTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCGGCATG- 41472794 Query 33134 ATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 33193 ||| || || || | || || ||| ||||| | |||||||| || || || | Sbjct 41472795 -TCTGTCTGCCACAGACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 41472853 Query 33194 TAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAG 33253 | || || | ||| |||| || ||||| ||||| || | || |||| | || | Sbjct 41472854 TCACAGGCAAGGCCTCAGTGAGGAATTCCTGTTCTATCCAAACAGCATTGATAATTCTTT 41472913 Query 33254 ATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAAT 33313 ||| | | || || ||| || | | || || ||||||| || || |||| Sbjct 41472914 CTCTTATTCTCTCCTCCAATGGTTTGTGTACCAGGTGATTGAACATCAGGCAGGCAAAAT 41472973 Query 33314 CGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTA 33373 | ||||| | |||||| |||| |||||| ||||| |||||||| ||||| || ||||| | Sbjct 41472974 CACAGTGTAAACCCTCATCTCCACTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCATCA 41473033 Query 33374 GGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTA 33433 | || || || || ||||| ||||| || || || | |||||||||| | ||||| Sbjct 41473034 GTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAAGATG---CCTTCCG 41473090 Query 33434 CTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTTT 33490 ||||||||||| | | || | || ||||| | | || |||| ||||| | Sbjct 41473091 CTGCAGCAAAGACTACAACACGTTCCCCATAGGTAGCTGCTTTGTCCCCAATCCAGTGCA 41473150 Query 33491 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGt 33550 |||||||| |||||||| || ||||||||||||||||| |||||||| ||| || | | Sbjct 41473151 AGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGCGAAATT 41473210 Query 33551 ttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAA 33610 |||| || |||||| | ||||| || || | | |||||||||| | ||||| | Sbjct 41473211 CCCTTTCTTTGGGATCTTTTATGTAAGTGTCAATAAGGAAACTATACATTCCAGAATGTA 41473270 Query 33611 TGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTG 33670 ||||||| ||||| || || || || ||||||| | || || || | ||| |||||| Sbjct 41473271 TGTTTTCCATGGCAATTTGGAAGCCACAGAAACAGCGGGCTTCTGTCACCTGAACTTCTT 41473330 Query 33671 TACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCA 33730 | ||||| ||| |||| ||| |||| ||||| || ||||| ||| |||| || ||| Sbjct 41473331 GGCTAAATCACTCCACCAAGTTTGCATTTACTATGCCATCACTTGCTACAAAGAAAACCA 41473390 Query 33731 ATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG----ATA 33786 ||||| |||||||| | | || || || | || ||||| || || || Sbjct 41473391 GAACATGGGATATAAAATCTCTCTCCTCGGGCTTCAG-GGATTCC---CAGTGCCAAATG 41473446 Query 33787 TCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATG 33846 || || || | || || || ||| | ||||| || || || || ||||| |||||||| Sbjct 41473447 TCCTTGGACAGGTCCACCTCCTCCGCGGTCCAGAAGGAAGCTTCCGCCTTCTTATACATC 41473506 Query 33847 TTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 | |||||| |||| || | | | ||||| || ||||| Sbjct 41473507 TGCCAGATATCATGGTACTCGGTGGGGAAGATGACAAA 41473544 Score = 192 bits (212), Expect = 7e-44 Identities = 316/450 (70%), Gaps = 8/450 (2%) Strand=Plus/Minus Query 33316 CAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGG 33375 ||||| | |||||| || || ||||| ||||| |||||||| ||||| || ||||| || Sbjct 132680207 CAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGT 132680148 Query 33376 CCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACT 33435 || | || | ||||| ||||| || || || |||||||||||| | | ||| ||| Sbjct 132680147 CCTTGTTTCCTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGAAGGTGCTTTCCACT 132680088 Query 33436 GCAGCAAAGGCAATAAGTCTCTCTCCAT---AACCGGCGCTGTCATGTATCC-ACTTTTG 33491 |||||||| || | ||||||| | | | ||| |||| || | Sbjct 132680087 AGGGCAAAGGCTGCAACACGTTCTCCATGGGTAACATCTTTGTTCCCAATCCAACACAAG 132680028 Query 33492 AGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtt 33551 | ||||| | |||||||| || |||| |||||| ||| | |||||||| |||||| | | Sbjct 132680027 A-CCCAAACTGCCTTCTTCTTGACAC-AGGCATTGTTCCAATGGCATTGAAGAGAAATTC 132679970 Query 33552 tttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAAT 33611 |||| || |||||||| || || || || | ||||||| || || ||||| || Sbjct 132679969 CCTTTCTTTGTTATCTTTA--ATGTGTGTCAATAAGGAGACTATTTATGTCAGAATGTAT 132679912 Query 33612 GTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGT 33671 |||||| | || || || || || ||||| || | || |||||||| | |||| Sbjct 132679911 GTTTTCTGTAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTCTGTAATCTGAATTTCTTG 132679852 Query 33672 ACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAA 33731 | |||| ||||| |||| ||||||| ||||| || |||| |||||||| || |||| Sbjct 132679851 AACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATGCTGCAAAGAAAGCCAG 132679792 Query 33732 TACATGTTTTATAAAATATTTTTCGTCTGG 33761 | || |||||||||| |||| || || Sbjct 132679791 AATATAGGATATAAAATATCTTTCCTCAGG 132679762 >seq8 Length=140346614 Score = 116 bits (128), Expect = 5e-21 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 33328 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33387 || ||||| || || ||||| |||||||| |||||||| ||||| || || | ||| || Sbjct 97934734 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCTTT 97934793 Query 33388 AGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33446 ||||| ||||| | ||| || ||||| || ||||| ||||||||||| ||||||||||| Sbjct 97934794 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 97934852 >seq14 Length=124513186 Score = 114 bits (126), Expect = 2e-20 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 62062 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62121 |||| ||||| || |||||||| || |||||| ||| | || || || || ||||||| Sbjct 61453820 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATAT 61453879 Query 62122 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62181 ||| |||||| |||||||| ||||| || || || || || ||||| || | | || | Sbjct 61453880 TCAAAGATTGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCATCTTGAGAACGGTTT 61453939 Query 62182 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62232 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 61453940 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 61453990 Score = 107 bits (118), Expect = 2e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396 || ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | Sbjct 61456673 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATG 61456732 Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456 ||||||||||| |||| || |||||||| || || || ||||| || || | | |||| Sbjct 61456733 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 61456792 Query 62457 CTATTTCTAAGACCGTA 62473 || ||||| | ||| || Sbjct 61456793 CTGTTTCTTATACCATA 61456809 Score = 102 bits (112), Expect = 1e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 63216 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGT 63275 ||||||||||| |||||||| |||||||||||||| | || |||||||||| | || Sbjct 61467730 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGCTGC 61467789 Query 63276 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63335 || || |||||||| ||||| || | ||| ||||| | | || || ||||||| || Sbjct 61467790 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCAAGGC 61467849 Query 63336 TCCAAGTATATGGC 63349 |||| ||| || || Sbjct 61467850 TCCAGGTAAATAGC 61467863 >seq13 Length=104990034 Score = 114 bits (126), Expect = 2e-20 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||| ||||| || || ||||| |||||||| ||||| || ||||| || || || || | Sbjct 9463322 CCTCATCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 9463263 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| ||||| || || || || || ||||||||||| ||||| ||||||||||||| Sbjct 9463262 TGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 9463203 Query 33446 C 33446 | Sbjct 9463202 C 9463202 Score = 102 bits (112), Expect = 1e-16 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 33564 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33623 |||||| | ||||| || || | ||||||||||||||| ||||| |||||||| ||||| Sbjct 9461211 ATCTTTTATGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGC 9461152 Query 33624 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33683 || || || || |||||||| | || || |||||||| |||||| | |||||| || Sbjct 9461151 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 9461092 Query 33684 CGCC 33687 | || Sbjct 9461091 CACC 9461088 >seq12 Length=128289686 Score = 100 bits (110), Expect = 4e-16 Identities = 152/216 (70%), Gaps = 3/216 (1%) Strand=Plus/Minus Query 31086 ATCTAGAGATTGTACTTCTTCCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGC 31145 ||| | || ||| |||||||| | |||||||||| | || |||| | || ||||| || Sbjct 60586989 ATCCAAAGCTTGAACTTCTTCTATTTCTGGATAAAAAATGCGTTCGCAAATGAGCTGTGC 60586930 Query 31146 TATTCTATCTCCAGTATTTACATTAAACGTACATTTTCCATTATTAATAAGAATGACTCC 31205 |||| ||| || | || || | |||| | ||| ||| ||||| || | || || Sbjct 60586929 AATTCGATCACCCTTTTTGACTTGAAACTTTTCTTTGCCAAAATTAAACAGTACAACACC 60586870 Query 31206 TATGTTTCCCCTATAATCTTCGTCTATTACACCGCCTCCTATATCAAT---GCCTTTTAG 31262 | ||||| ||||||||||| | ||| ||||| |||||| |||||| | |||| Sbjct 60586869 AACATTTCCTCTATAATCTTCATTTATGACACCAGCTCCTACATCAATAAAGTGTTTTGC 60586810 Query 31263 GGACAGACCAGACCTAGGAGCTATTCTACCATAGCA 31298 | || || |||| ||||||| ||| ||||| || Sbjct 60586809 AGCCAAGCCTGACCGTGGAGCTACTCTTCCATAACA 60586774 >seq19 Length=51387494 Score = 95.1 bits (104), Expect = 2e-14 Identities = 177/255 (69%), Gaps = 9/255 (4%) Strand=Plus/Minus Query 31047 TCCTGTTGATCCAAACCCT--TGATCTCCTCTATTTGTACTATCTAGAGATTGTACTTCT 31104 ||| || || ||||| ||| ||| | ||| | ||| ||| | || ||| |||||| Sbjct 45564561 TCCAGTAGAACCAAAACCTCCTGAGCCCCTTTTGGTGTC--ATCCAAAGCTTGAACTTCT 45564504 Query 31105 TCCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCTCCAGTATTT 31164 || | ||||||||| | || |||| | | || ||||| || |||| ||| | ||||| Sbjct 45564503 TCTATTTCTGGATAGAACATCCGTTCACAAATGAGCTGTGCAATTCGATCACGT-TATTT 45564445 Query 31165 -ACATTAAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAATC 31223 || | |||| | ||| ||| ||||| | | || || || ||||| |||||||| Sbjct 45564444 GACTTCAAACTTTTCTTTGCCAAAATTAAAGACTACAACACCAATATTTCCTCTATAATC 45564385 Query 31224 TTCGTCTATTACACCGCCTCCTATAT---CAATGCCTTTTAGGGACAGACCAGACCTAGG 31280 ||| ||| | ||||| |||||| || ||| | |||| | || ||||||| || Sbjct 45564384 TTCATCTGTGACACCAGCTCCTACATCTACAAAGTGTTTTGCAGCCAAGCCAGACCGTGG 45564325 Query 31281 AGCTATTCTACCATA 31295 ||||| ||| ||||| Sbjct 45564324 AGCTACTCTTCCATA 45564310 >SEQ44210 Length=79069 Score = 91.5 bits (100), Expect = 2e-13 Identities = 150/216 (69%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 31086 ATCTAGAGATTGTACTTCTTCCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGC 31145 ||| | || ||| |||||||| | |||||||||| | || |||| | || || || || Sbjct 9507 ATCCAAAGCTTGAACTTCTTCTATTTCTGGATAAAAAATCCGTTCGCAAATGAGTTGTGC 9566 Query 31146 TATTCTATCTCCAGTATTTACATTAAACGTACATTTTCCATTATTAATAAGAATGACTCC 31205 |||| ||| || | || || | |||| | ||| ||| ||||| || | || || Sbjct 9567 AATTCGATCACCCTTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACC 9626 Query 31206 TATGTTTCCCCTATAATCTTCGTCTATTACACCGCCTCCTATATC---AATGCCTTTTAG 31262 | ||||| ||||||||||| ||||| ||||| |||||| ||| || | ||| Sbjct 9627 AACATTTCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCAGTAAAGTGATTTGC 9686 Query 31263 GGACAGACCAGACCTAGGAGCTATTCTACCATAGCA 31298 | || || |||| ||||||| ||| ||||| || Sbjct 9687 AGCCAAGCCTGACCCTGGAGCTACTCTTCCATAACA 9722 >seq9 Length=125784921 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/209 (70%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 31047 TCCTGTTGATCCAAACCCT--TGATCTCCTCTATTTGTACTATCTAGAGATTGTACTTCT 31104 ||| || || ||||| ||| ||| | ||| || ||| ||| | || ||| |||||| Sbjct 85039906 TCCAGTGGAACCAAAACCTCCTGAACCCCTTTAGGTGTC--ATCCAAAGCTTGAACTTCT 85039963 Query 31105 TCCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCTCCAGTATTT 31164 || | ||| |||||| | || |||| | || ||||| || |||| ||| | | || Sbjct 85039964 TCTATTTCCGGATAAAAAATCCGTTCGCAAATGAGCTGTGCAATTCGATCACACTTTTTG 85040023 Query 31165 ACATTAAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAATCT 31224 || | |||| | ||| ||| |||| || | || || | ||||| ||||||||| Sbjct 85040024 ACTTCAAACTTTTCTTTGCCAAAGTTAAACAGTACAACACCAACATTTCCTCTATAATCT 85040083 Query 31225 TCGTCTATTACACCGCCTCCTATATCAAT 31253 || ||||| ||||| |||||| |||||| Sbjct 85040084 TCATCTATGACACCAGCTCCTACATCAAT 85040112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622454806959440