Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq16 105 5e-18 seq11 98.7 8e-16 seq5 98.7 8e-16 seq7 86.0 5e-12 seq3 86.0 5e-12 >seq16 Length=74961506 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| || | ||| |||| ||||| || |||||||| || ||||||||||| | Sbjct 15839953 CCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 15840012 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | || |||| || ||||| ||| | || |||| ||| ||||| || Sbjct 15840013 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 15840072 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| ||||| || || || || |||||| | | | ||||| | ||||||| Sbjct 15840073 ATGCCTTCTTTATCCTGGATCTTGGC--CTTCACATTTTCGATGGTGTCACTGGGCTCCA 15840130 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| ||||||||| || |||||||| || || || || |||||||| Sbjct 15840131 CTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 15840179 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| || | ||| |||| ||||| || |||||||| || ||||||||||| | Sbjct 15840181 CCACCTCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 15840240 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | || |||| || ||||| ||| | || |||| ||| ||||| || Sbjct 15840241 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 15840300 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| ||||| || || || || |||||| | | | ||||| | ||||||| Sbjct 15840301 ATGCCTTCTTTATCCTGGATCTTGGC--CTTCACATTTTCGATGGTGTCACTGGGCTCCA 15840358 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| ||||||||| || |||||||| || || || || |||||||| Sbjct 15840359 CTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 15840407 Score = 98.7 bits (108), Expect = 8e-16 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| |||| ||||| || |||||||| || ||||||||||| | | || | | || Sbjct 15839739 CAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATC 15839798 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || ||||| ||| | || |||| ||| ||||| || | ||| ||||| || Sbjct 15839799 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATC 15839858 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || || |||||| | | | ||||| | ||||||| || | ||||||| Sbjct 15839859 TTGGATCTTGGC--CTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATG 15839916 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || |||||||| || || ||||| |||||||| Sbjct 15839917 GTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 15839951 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| |||| ||||| || ||||| || || ||||||||||| | | || | | || Sbjct 15840421 CAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATC 15840480 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || ||||| ||| | || |||| ||| ||||| || | ||| || || || Sbjct 15840481 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATC 15840540 Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 |||| |||||| | | | ||||| | ||||||| || | ||||||||| Sbjct 15840541 CTGGATTTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGT 15840600 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || |||||||| || || || || |||||||||||| Sbjct 15840601 CTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTTG 15840637 >seq11 Length=132960392 Score = 98.7 bits (108), Expect = 8e-16 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| |||| || | || |||| ||||| |||||||| || || ||||||||||| | Sbjct 124902026 CCCACCTCTGAGACGGAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGA 124902085 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || ||| | || |||| ||||| || ||| | || | || ||| ||||| ||| Sbjct 124902086 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGAGG 124902145 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | ||| || ||||| || ||||| ||| || | | | ||||||| ||||||| Sbjct 124902146 GATGCCTTCCTTGTCCTGGATCTTTGC--CTTGACATTCTCAATGGTGTCGCTGGGCTCC 124902203 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| || || ||||| || || || || |||||||| Sbjct 124902204 ACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 124902253 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| |||| ||||| |||||||| || || ||||||||||| | || ||| | || Sbjct 124901585 CAGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 124901644 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || || || ||| | || |||| ||| ||||| ||| | ||| || ||||| Sbjct 124901645 TTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTC 124901704 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || ||||| ||| || | | | |||||| | |||||| || | ||||||| Sbjct 124901705 CTGGATCTTTGC--CTTGACATTTTCAATAGTGTCACTGGGCTCGACCTCGAGGGTGATG 124901762 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || ||||| || || || || |||||||| Sbjct 124901763 GTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 124901797 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| |||| || | || |||| ||||| || ||||| || || ||||||||||| | Sbjct 124902254 CCCACCTCTGAGACGGAGCACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAGTCAGA 124902313 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || ||| | || |||| ||||| || ||| | || | || ||| ||||| ||| Sbjct 124902314 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCAGCAAATATCAACCTCTGCTGGTCAGGAGG 124902373 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | ||| || ||||| || ||||| ||| || | | | ||||| | |||||| Sbjct 124902374 GATGCCTTCCTTGTCCTGGATCTTTGC--CTTGACATTCTCAATGGTGTCACTGGGCTCG 124902431 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| || || ||||| || || || || |||||||| Sbjct 124902432 ACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 124902481 Score = 82.4 bits (90), Expect = 6e-11 Identities = 143/206 (69%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 ||||| |||||||| || || ||||||||||| | || ||| | || |||| || Sbjct 124902735 TGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGC 124902794 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || ||| | || |||| ||| ||||| ||| | ||| || || || || ||| Sbjct 124902795 TTTCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTATCTTGGATCTTT 124902854 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | ||||| | |||||| || | ||||||||| || || | Sbjct 124902855 GC--CTTGACATTCTCGATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAG 124902912 Query 16911 TCAGCGTTTTGACAAAAATCTGCATT 16936 |||| || || || || ||||||||| Sbjct 124902913 TCAGGGTCTTCACGAAGATCTGCATT 124902938 >seq5 Length=183742232 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| || | || |||| ||||| |||||||| || || ||||||||||| | Sbjct 52769885 CCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAG 52769944 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | || |||| |||||||| ||| | || || ||||| ||||| || Sbjct 52769945 AGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGG 52770004 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| ||||| ||| || || | | | ||||| | |||||| Sbjct 52770005 ATACCCTCCTTGTCTTGAATTTTGGCT--TTGACGTTCTCAATGGTGTCACTGGGCTCGA 52770062 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 || | |||||||||||| || || || || || ||||| |||||||| || Sbjct 52770063 CCTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAAGATCTGCATGTT 52770114 >seq7 Length=162899863 Score = 86.0 bits (94), Expect = 5e-12 Identities = 154/223 (69%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| || | || |||| ||||| |||||||| || || ||||||||||| | Sbjct 148001495 CCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAG 148001436 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | || |||| |||||||| ||| | || || ||||| ||||| || Sbjct 148001435 AGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGG 148001376 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| ||||| ||| || || | | | ||||| | |||||| Sbjct 148001375 ATACCCTCCTTGTCTTGAATTTTGGCT--TTGACATTCTCAATGGTGTCACTGGGCTCGA 148001318 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAAT 16929 || | |||||||||||| || || || || || ||||| || Sbjct 148001317 CCTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAAGAT 148001275 >seq3 Length=181338541 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||| |||| ||| ||| ||||| ||||||| || || |||||| |||| | Sbjct 85701828 CCACCTTGTAGGTGCAGCCCCAGGTGCAGGATGGACTCTTTCTGGATGTTGCAGTCTGAG 85701769 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | ||||||| |||||||||||| | || || ||||| ||||| | || Sbjct 85701768 AGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAATATCAGACGCTGCTGGTCAAGTGGG 85701709 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||| | ||||| ||| || | | ||||| | |||||| Sbjct 85701708 ATGCCCTCCTTGGCTTGAATTTTGGCCTTGACATTCTCAGTGGTGTCACTGGGCTCGACC 85701649 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| || || | || || || ||||| |||||||| Sbjct 85701648 TCGAGGGTGATGGTCTTGCCTGCGAGGGTCTTCACAAAGATCTGCAT 85701602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404775813109660