Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq21 307 1e-78 seq14 120 4e-22 seq8 111 2e-19 seq13 100 4e-16 seq12 95.1 2e-14 SEQ44210 84.2 3e-11 seq19 82.4 1e-10 >seq21 Length=143691637 Score = 307 bits (340), Expect = 1e-78 Identities = 634/938 (68%), Gaps = 24/938 (3%) Strand=Plus/Plus Query 32314 TTTAAAAGTCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 32370 |||| |||||| |||| | | |||| ||| ||| | || |||| |||||||| Sbjct 41472621 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGATTCGACACCACTCCCATCC 41472680 Query 32371 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 32430 | || || || || | || || || || || || || | | ||| ||||| | Sbjct 41472681 TCTGATACTCCTTTACTCTCTTCTCAAAGAAGTTCGTCTTTC-----AGTGAAATATTCT 41472735 Query 32431 CCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 32490 |||| || || ||||| || || | ||| || |||| |||| ||| | || Sbjct 41472736 CCATAAAGTCAAATGGGTTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCGGCATG- 41472794 Query 32491 ATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 32550 ||| ||||| ||| | || || ||| ||||| | |||||||| || || || | Sbjct 41472795 -TCTGTCTGCCACAGACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 41472853 Query 32551 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 32610 | || || | ||| |||| || ||||| ||||| || | || || | | || | Sbjct 41472854 TCACAGGCAAGGCCTCAGTGAGGAATTCCTGTTCTATCCAAACAGCATTGATAATTCTTT 41472913 Query 32611 ATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 32670 ||||| | | || || ||| | | | || || ||||||| || || |||| Sbjct 41472914 CTCTTATTCTCTCCTCCAATGGTTTGTGTACCAGGTGATTGAACATCAGGCAGGCAAAAT 41472973 Query 32671 CGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 32730 | ||||||| |||||| |||| |||||| | ||| |||||||| ||||| || ||||| | Sbjct 41472974 CACAGTGTAAACCCTCATCTCCACTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCATCA 41473033 Query 32731 GGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTA 32790 | || || || || ||||| ||||| || ||||| | |||||||||| | ||||| Sbjct 41473034 GTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAAGA---TGCCTTCCG 41473090 Query 32791 CTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTTT 32847 |||| |||||| | | || | || ||||| | | || |||| ||||| | Sbjct 41473091 CTGCAGCAAAGACTACAACACGTTCCCCATAGGTAGCTGCTTTGTCCCCAATCCAGTGCA 41473150 Query 32848 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGt 32907 |||||||| |||||||| || ||||||||||| || || || ||||| ||| || | | Sbjct 41473151 AGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGCGAAATT 41473210 Query 32908 ttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAA 32967 |||| || |||||| | || || ||||| | | |||||||||| | ||||| | Sbjct 41473211 CCCTTTCTTTGGGATCTTTTATGTAAGTGTCAATAAGGAAACTATACATTCCAGAATGTA 41473270 Query 32968 TGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTG 33027 ||||||| ||||| ||||| || || |||| || | || || || | ||| |||||| Sbjct 41473271 TGTTTTCCATGGCAATTTGGAAGCCACAGAAACAGCGGGCTTCTGTCACCTGAACTTCTT 41473330 Query 33028 TACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCA 33087 | ||||| || | || ||| |||| ||||| || ||||| ||| |||| || ||| Sbjct 41473331 GGCTAAATCACTCCACCAAGTTTGCATTTACTATGCCATCACTTGCTACAAAGAAAACCA 41473390 Query 33088 ATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG----ATA 33143 ||||| |||||||| | | || || || | || ||||| || || || Sbjct 41473391 GAACATGGGATATAAAATCTCTCTCCTCGGGCTTCAG-GGATTCC---CAGTGCCAAATG 41473446 Query 33144 TCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATA 33203 || || || | ||||| || ||| | ||||| || || || || ||||| |||||||| Sbjct 41473447 TCCTTGGACAGGTCCACCTCCTCCGCGGTCCAGAAGGAAGCTTCCGCCTTCTTATACATC 41473506 Query 33204 TTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241 | |||||| ||||| || | | || || || ||||| Sbjct 41473507 TGCCAGATATCATGGTACTCGGTGGGGAAGATGACAAA 41473544 Score = 197 bits (218), Expect = 2e-45 Identities = 317/450 (70%), Gaps = 8/450 (2%) Strand=Plus/Minus Query 32673 CAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGG 32732 ||||||| |||||| || || ||||| | ||| |||||||| ||||| || ||||| || Sbjct 132680207 CAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGT 132680148 Query 32733 CCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACT 32792 || | || | ||||| ||||| ||||| || ||||||||||| | | ||| ||| Sbjct 132680147 CCTTGTTTCCTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGAAGGTGCTTTCCACT 132680088 Query 32793 GCCGCAAAGGCAATAAGTCTCTCTCCAT---AACCGGCGCTGTCATGTATCC-ACTTTTG 32848 |||||||| || | ||||||| | | | ||| |||| || | Sbjct 132680087 AGGGCAAAGGCTGCAACACGTTCTCCATGGGTAACATCTTTGTTCCCAATCCAACACAAG 132680028 Query 32849 AGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtt 32908 | ||||| | |||||||| || |||| ||||||||| | || ||||| |||||| | | Sbjct 132680027 A-CCCAAACTGCCTTCTTCTTGACAC-AGGCATTGTTCCAATGGCATTGAAGAGAAATTC 132679970 Query 32909 tttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAAT 32968 |||| || |||||||| || ||| ||||| | ||||||| || || ||||| || Sbjct 132679969 CCTTTCTTTGTTATCTTTA--ATGTGTGTCAATAAGGAGACTATTTATGTCAGAATGTAT 132679912 Query 32969 GTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGT 33028 |||||| | || ||||| || || |||||||| | || |||||||| | |||| Sbjct 132679911 GTTTTCTGTAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTCTGTAATCTGAATTTCTTG 132679852 Query 33029 ACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAA 33088 | |||| |||| | || ||||||| ||||| || |||| |||||||| || |||| Sbjct 132679851 AACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATGCTGCAAAGAAAGCCAG 132679792 Query 33089 TACATGTTTTATAAAATATTTTTCGTCTGG 33118 | || |||||||||| |||| || || Sbjct 132679791 AATATAGGATATAAAATATCTTTCCTCAGG 132679762 >seq14 Length=124513186 Score = 120 bits (132), Expect = 4e-22 Identities = 129/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 61917 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 61976 |||| ||||| || |||||||| || |||||| ||| | || || || || ||||||| Sbjct 61453820 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATAT 61453879 Query 61977 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCT 62036 ||| |||||| |||||||| ||||| || || || || || ||||| || | || || | Sbjct 61453880 TCAAAGATTGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCATCTTGAGAACGGTTT 61453939 Query 62037 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62087 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 61453940 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 61453990 Score = 107 bits (118), Expect = 2e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 62192 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 62251 || ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | Sbjct 61456673 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATG 61456732 Query 62252 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62311 ||||||||||| |||| || |||||||| || || || ||||| || || | | |||| Sbjct 61456733 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 61456792 Query 62312 CTATTTCTAAGACCGTA 62328 || ||||| | ||| || Sbjct 61456793 CTGTTTCTTATACCATA 61456809 Score = 102 bits (112), Expect = 1e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 63071 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGT 63130 ||||||||||| |||||||| |||||||||||||| | || |||||||||| | || Sbjct 61467730 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGCTGC 61467789 Query 63131 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63190 || || |||||||| ||||| || | ||| ||||| | | || || ||||||| || Sbjct 61467790 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCAAGGC 61467849 Query 63191 TCCAAGTATATGGC 63204 |||| ||| || || Sbjct 61467850 TCCAGGTAAATAGC 61467863 Score = 93.3 bits (102), Expect = 5e-14 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869 |||| || | ||| |||||||||||||||| || || || || || || || || || | Sbjct 61485092 CACTGAACACTTTCTTTGTTTCTTTGTGTAAGTTAGAGACAGCAATCCTGGCTGCCAGGA 61485151 Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929 | ||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 61485152 TAGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 61485211 Query 63930 ATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975 ||| || || || || ||| | || | |||||||| || ||||| Sbjct 61485212 GTTCCACTGTGGTGACCCCACTGTACAAGCCTTGGATTACTTTCAT 61485257 Score = 89.7 bits (98), Expect = 7e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 63446 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAAC 63505 ||||| | ||| | ||| | || || ||||| || | || |||||||| ||||||||| Sbjct 61478337 CTAGAAAGTTGTGGGCGATTGGTACCAGCATTGAAGAGAGTGGGAGAAGCATGAGTAAAC 61478396 Query 63506 CATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATT 63565 || | |||||||| ||||| || || ||||| |||| || || || || || || Sbjct 61478397 CACCTCTCAGAAAGAAGATTATATGTTTCAATTGCTGCATCAATGTCTTCTTTGTGGATC 61478456 Query 63566 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 63604 || || | || | ||| ||||| || || ||||||||| Sbjct 61478457 CCAACAGATACTCTCATCAACATATGTTGTGGTCTTTCA 61478495 >seq8 Length=140346614 Score = 111 bits (122), Expect = 2e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 32685 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 32744 || ||||| || || | ||| |||||||| |||||||| ||||| || || | ||| || Sbjct 97934734 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCTTT 97934793 Query 32745 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 32803 ||||| ||||| | ||||| ||||| || ||||||||||||||||| || |||||||| Sbjct 97934794 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 97934852 >seq13 Length=104990034 Score = 100 bits (110), Expect = 4e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 32921 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 32980 |||||| | || || ||||| | ||||||||||||||| ||||| |||||||| ||||| Sbjct 9461211 ATCTTTTATGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGC 9461152 Query 32981 CATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33040 ||||| || || ||||| || | || || |||||||| |||||| | |||||| || Sbjct 9461151 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 9461092 >seq12 Length=128289686 Score = 95.1 bits (104), Expect = 2e-14 Identities = 149/209 (71%), Gaps = 7/209 (3%) Strand=Plus/Minus Query 30452 TTGTACTTCTTTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATC 30511 ||| ||||||| | |||||||||| | || |||| | || ||||| || |||| ||| Sbjct 60586980 TTGAACTTCTTCTATTTCTGGATAAAAAATGCGTTCGCAAATGAGCTGTGCAATTCGATC 60586921 Query 30512 CCCCGTATTTACATTGAA--TGTACATTTTCCATTATTAATAAGAATGACTCCTATATTT 30569 ||| | || || ||||| | | | ||| ||| ||||| || | || || | |||| Sbjct 60586920 ACCCTTTTTGAC-TTGAAACTTTTC-TTTGCCAAAATTAAACAGTACAACACCAACATTT 60586863 Query 30570 CCCCTATAATCTTCGTCTATTACACCGCCTCCTATATCAAT---GCCTTTTAGGGACAGA 30626 || ||||||||||| | ||| ||||| |||||| |||||| | |||| | || Sbjct 60586862 CCTCTATAATCTTCATTTATGACACCAGCTCCTACATCAATAAAGTGTTTTGCAGCCAAG 60586803 Query 30627 CCAGACCTAGGAGCTATTCTACCATAGCA 30655 || |||| ||||||| ||| ||||| || Sbjct 60586802 CCTGACCGTGGAGCTACTCTTCCATAACA 60586774 >SEQ44210 Length=79069 Score = 84.2 bits (92), Expect = 3e-11 Identities = 143/207 (69%), Gaps = 3/207 (1%) Strand=Plus/Plus Query 30452 TTGTACTTCTTTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATC 30511 ||| ||||||| | |||||||||| | || |||| | || || || || |||| ||| Sbjct 9516 TTGAACTTCTTCTATTTCTGGATAAAAAATCCGTTCGCAAATGAGTTGTGCAATTCGATC 9575 Query 30512 CCCCGTATTTACATTGAATGTACATTTTCCATTATTAATAAGAATGACTCCTATATTTCC 30571 ||| | || || | || | ||| ||| ||||| || | || || | |||||| Sbjct 9576 ACCCTTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAACATTTCC 9635 Query 30572 CCTATAATCTTCGTCTATTACACCGCCTCCTATATC---AATGCCTTTTAGGGACAGACC 30628 ||||||||||| ||||| ||||| |||||| ||| || | ||| | || || Sbjct 9636 TCTATAATCTTCATCTATGACACCAGCTCCTACATCAGTAAAGTGATTTGCAGCCAAGCC 9695 Query 30629 AGACCTAGGAGCTATTCTACCATAGCA 30655 |||| ||||||| ||| ||||| || Sbjct 9696 TGACCCTGGAGCTACTCTTCCATAACA 9722 >seq19 Length=51387494 Score = 82.4 bits (90), Expect = 1e-10 Identities = 143/205 (70%), Gaps = 5/205 (2%) Strand=Plus/Minus Query 30452 TTGTACTTCTTTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATC 30511 ||| ||||||| | ||||||||| | || |||| | | || ||||| || |||| ||| Sbjct 45564513 TTGAACTTCTTCTATTTCTGGATAGAACATCCGTTCACAAATGAGCTGTGCAATTCGATC 45564454 Query 30512 CCCCGTATTT-ACATTGAATGTACATTTTCCATTATTAATAAGAATGACTCCTATATTTC 30570 | ||||| || | || | ||| ||| ||||| | | || || ||||||| Sbjct 45564453 ACGT-TATTTGACTTCAAACTTTTCTTTGCCAAAATTAAAGACTACAACACCAATATTTC 45564395 Query 30571 CCCTATAATCTTCGTCTATTACACCGCCTCCTATAT---CAATGCCTTTTAGGGACAGAC 30627 | ||||||||||| ||| | ||||| |||||| || ||| | |||| | || | Sbjct 45564394 CTCTATAATCTTCATCTGTGACACCAGCTCCTACATCTACAAAGTGTTTTGCAGCCAAGC 45564335 Query 30628 CAGACCTAGGAGCTATTCTACCATA 30652 |||||| ||||||| ||| ||||| Sbjct 45564334 CAGACCGTGGAGCTACTCTTCCATA 45564310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633131161426400