Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq21 246 3e-60 seq13 96.9 4e-15 >seq21 Length=143691637 Score = 246 bits (272), Expect = 3e-60 Identities = 442/645 (69%), Gaps = 3/645 (0%) Strand=Plus/Plus Query 93061 TGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTC 93120 |||||| ||||| | | |||| |||| | ||| ||||| || |||||||| || || Sbjct 41472933 TGGTTTGTGTACCAGGTGATTGAACATCAGGCAGGCAAAATCACAGTGTAAACCCTCATC 41472992 Query 93121 TCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCA 93180 || || | |||||| || || | || || | ||||||||||||||||||||| Sbjct 41472993 TCCACTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCA 41473052 Query 93181 AAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAAT 93240 ||||| || |||||| ||||||||| | | |||||| | || ||||| | |||| Sbjct 41473053 GAATATCGATGCAAAATAACCAGAAAAGA---TGCCTTCCGCTGCAGCAAAGACTACAAC 41473109 Query 93241 ACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTT 93300 |||||| || | | || | || | ||||| | || |||||||| || || || Sbjct 41473110 ACGTTCCCCATAGGTAGCTGCTTTGTCCCCAATCCAGTGCAAGGCCCAATCTGCCTTCTT 41473169 Query 93301 CTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCG 93360 ||| | |||||| | ||||| || || || || | | || | || | | |||| Sbjct 41473170 CTTGACACAAGGCATCGTTTCAATGGCATTGAAGCGAAATTCCCTTTCTTTGGGATCTTT 41473229 Query 93361 TATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTG 93420 |||||| || || || | | | ||||||| ||||||| | || ||||| |||||||| Sbjct 41473230 TATGTAAGTGTCAATAAGGAAACTATACATTCCAGAATGTATGTTTTCCATGGCAATTTG 41473289 Query 93421 GAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAG 93480 ||| || ||||||| | ||||| || | ||| |||||||| ||||| ||| || | Sbjct 41473290 GAAGCCACAGAAACAGCGGGCTTCTGTCACCTGAACTTCTTGGCTAAATCACTCCACCAA 41473349 Query 93481 ATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATG 93540 ||| |||| ||||| ||||| |||| |||| ||| ||| | ||| |||||||| Sbjct 41473350 GTTTGCATTTACTATGCCATCACTTGCTACAAAGAAAACCAGAACATGGGATATAAAATC 41473409 Query 93541 TTTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTC 93600 | |||| || || || ||||| | | | || || || || || || || || Sbjct 41473410 TCTCTCCTCGGGCTTCAGGGATTCCCAGTGCCAAATGTCCTTGGACAGGTCCACCTCCTC 41473469 Query 93601 GACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAAT 93660 | ||||| || || ||||| || || || ||||| | ||| || || || || | | Sbjct 41473470 CGCGGTCCAGAAGGAAGCTTCCGCCTTCTTATACATCTGCCAGATATCATGGTACTCGGT 41473529 Query 93661 TGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTC 93705 || || ||||||||||| ||||| | | | || | |||||| Sbjct 41473530 GGGGAAGATGACAAAACGGCAGGGGTTTTGTCTCAGCAGCGGCTC 41473574 Score = 123 bits (136), Expect = 3e-23 Identities = 307/461 (67%), Gaps = 5/461 (1%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACT-CATTGCTGAATGTTA 93149 ||| ||||||| |||||||| || || | || || || | ||||| ||||| | Sbjct 132680220 GCAAGCAAAGTAACAGTGTAAACCCTCATCAC-TGCTAATAAGTTCATTGGAAAATGTGA 132680162 Query 93150 AACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaa 93209 || || | ||||||| ||||| ||||||| ||||| |||||| ||||||||| | Sbjct 132680161 GGCCAGGCATCAGTCCTTGTTTCCTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGA 132680102 Query 93210 aTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGC 93269 | | | |||||| ||||| || ||| |||||| || | | || | | Sbjct 132680101 AGGTGCTTTCCACTAGGGCAAAGGCTGCAACACGTTCTCCATGGGTAACATCTTTGTTCC 132680042 Query 93270 TGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGT 93329 ||||| || ||||| | || || ||||| | ||| || | |||| | || || | Sbjct 132680041 CAATCCAACACAAGACCCAAACTGCCTTCTTCTTGACACA-GGCATTGTTCCAATGGCAT 132679983 Query 93330 TAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACA 93389 | || || | || | || | |||| |||| ||| | || | ||| || | Sbjct 132679982 TGAAGAGAAATTCCCTTTCTTTGTTATCTTTAATGTGTGT--CAATAAGGAGACTATTTA 132679925 Query 93390 TTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGA 93449 | |||||||| | || || | ||||||||||| || ||||| || | ||| || | Sbjct 132679924 TGTCAGAATGTATGTTTTCTGTAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTCTGTAA 132679865 Query 93450 TCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509 |||| | ||||||| |||| || || | ||||||| ||||| ||||| |||||| Sbjct 132679864 TCTGAATTTCTTGAACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATGCTG 132679805 Query 93510 CaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCA 93550 |||| ||||||| |||| |||||||| | | || ||| Sbjct 132679804 CAAAGAAAGCCAGAATATAGGATATAAAATATCTTTCCTCA 132679764 >seq13 Length=104990034 Score = 96.9 bits (106), Expect = 4e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 93355 ATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGC 93414 |||| |||||| || || || | ||| ||||||||||||||| | || ||||| || Sbjct 9461211 ATCTTTTATGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGC 9461152 Query 93415 AATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTC 93474 ||||||||| || |||||||| | ||||| || ||||| |||||||| ||||| ||| Sbjct 9461151 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 9461092 Query 93475 TAC 93477 || Sbjct 9461091 CAC 9461089 Score = 96.9 bits (106), Expect = 4e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 |||||| ||||| | || || | ||||||||||||||||||||| ||||| || ||| Sbjct 9463302 TCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCA 9463243 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246 ||| ||| ||||| || || |||||||| || ||||| || || | |||||| Sbjct 9463242 AAAGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCTACGACACGTTC 9463190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556420643302160