Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq5 159 3e-34 seq7 150 2e-31 seq2 127 2e-24 seq15 120 3e-22 seq8 105 6e-18 seq11 93.3 4e-14 seq20 91.5 1e-13 seq19 82.4 6e-11 >seq5 Length=183742232 Score = 159 bits (176), Expect = 3e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||| || ||||| || || | || || ||||| |||| ||||| || || | Sbjct 52770115 AAACATGCAGATCTTTGTGAAGACCCTCACGGGCAAAACCATCACCCTTGAGGTCGAGCC 52770056 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 || || ||| | || | ||||| ||||||||||||||||||||||| ||||| || Sbjct 52770055 CAGTGACACCATTGAGAACGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGA 52769996 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 || || ||||| |||||||||||||||||| | || ||| |||||| |||| || || Sbjct 52769995 CCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAAGATGGCCGCACTCTCTCAGACTA 52769936 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||| || ||||| |||||| | || | || ||||| |||| || || Sbjct 52769935 CAACATCCAGAAAGAGTCCACCCTGCACCTGGTGTTGCGCCTGCGAGGTGG 52769885 >seq7 Length=162899863 Score = 150 bits (166), Expect = 2e-31 Identities = 166/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 22225 ATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACC 22284 || ||||| || || | || || ||||| |||| || || || || ||| || ||| Sbjct 148001275 ATCTTTGTGAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTCGAGCCCAGTGACACC 148001334 Query 22285 GTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGT 22344 | || || ||||| ||||||||||||||||||||||| ||||| || || || ||| Sbjct 148001335 ATTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCAGCAGCGT 148001394 Query 22345 CTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAA 22404 || |||||||||||||||||| | || ||| |||||| |||| || |||||||| || Sbjct 148001395 CTGATATTTGCCGGCAAACAGCTGGAAGATGGCCGCACTCTCTCAGACTACAACATCCAG 148001454 Query 22405 AAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| |||||| | || | || ||||| |||| || || Sbjct 148001455 AAAGAGTCCACCCTGCACCTGGTGTTGCGCCTGCGAGGTGG 148001495 Score = 122 bits (134), Expect = 7e-23 Identities = 150/204 (74%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| || || | | || || || |||| ||||| | || ||| Sbjct 115126966 AGATGCAGATCTTTGTGAAGACCCTCATGGGCAAGACCATCACCCTTGAGATCGAGCCCA 115127025 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGA-GGGTATTCCACCCGAT 22335 || ||| | | || ||||| ||||||||||||||||| |||||| ||||| || Sbjct 115127026 GTGACACCATTTAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGGTATCCCACCTGAC 115127085 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || ||||| ||| |||| || |||||| | |||||| |||||| |||| | ||| Sbjct 115127086 CAGCAGCGTCTGATACTTGCTGGGAAACAGCTGGAGGATGGCCGCACTCTCTCAGGCTAC 115127145 Query 22396 AACATTCAAAAAGAATCCACCATA 22419 ||||| || ||||| |||||| || Sbjct 115127146 AACATCCAGAAAGAGTCCACCCTA 115127169 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || | ||| || || | || || | ||| |||| |||| || | ||| Sbjct 78358282 ATGCAGATCTCTGTAAAGACCCTCACAGGAAGAACCATCACCTTTGAGGTCCAGCCCAGT 78358341 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| || || ||||| || || || ||||||||||| || ||||| || || Sbjct 78358342 GACACCAGTGAAAATGTCAAAGCCAAGATCCATGACAAGGAGGGCATCCCACCTGACCAG 78358401 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||| ||||||| ||||||||||| |||||| || ||| | || ||||| ||| Sbjct 78358402 CAGCATCTGATATTTGTGGGCAAACAGTTGGAGGATGGCCACACTCTTTCAGATTATAAC 78358461 Query 22399 ATTCAAAAAGAATCCACC 22416 || || ||||| |||||| Sbjct 78358462 ATCCAGAAAGAGTCCACC 78358479 >seq2 Length=188283584 Score = 127 bits (140), Expect = 2e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| || || | || || || || |||||||||| || | ||| Sbjct 168559229 AGATGCAGATCTTTGTGAAGACACTTACTGGCAAGACCATCACTCTTGAGGTCAAGCCCA 168559288 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 || ||| || ||| ||||| ||||||||||||||||||||||| ||||| || | Sbjct 168559289 GTGACACCAATGAGGATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACC 168559348 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || | ||| ||| |||||||||||||| | |||||| ||| || |||| || ||| Sbjct 168559349 AGCAGCATCTGATACTTGCCGGCAAACAGCTGGAGGATGGCCGAACTCTCTCAGACTACG 168559408 Query 22397 ACATTCAAAAAGAATCCACC 22416 |||| |||| |||||| Sbjct 168559409 ACATCTGGGAAGAGTCCACC 168559428 >seq15 Length=108049171 Score = 120 bits (132), Expect = 3e-22 Identities = 155/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| | ||||| | || | || || || || ||| ||||| || || ||| Sbjct 53408298 ATGCAGCTCTTTGTGGAGACCCTCACGGGCAAGACCATCATCCTTGAGGTCGAGCCCAGT 53408239 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 | ||| || || ||||| |||||||||||||| |||||||| ||||| || || Sbjct 53408238 TACACCACTGAGAATTTCAAAGCCAAAATTCAAGACAAAGAGGGTATCCCACCTGACCAG 53408179 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| |||||||| ||||||||| | |||||| | |||| |||| || |||||| Sbjct 53408178 CAGCGTCTGATATTTGCTGGCAAACAGCTGGAGGATGGCTGCACTCTCTCAGACTACAAC 53408119 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGC 22432 || |||||| | |||||| | || | ||| ||| Sbjct 53408118 ATCCAAAAACAGTCCACCGTGCACCTGGTTCTGC 53408085 >seq8 Length=140346614 Score = 105 bits (116), Expect = 6e-18 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 |||||||||||||||||||| || ||||| || || || | ||| ||| |||| |||||| Sbjct 118814354 AAAATTCAAGACAAGGAGGGCATCCCACCTGACCAGCAGCATCTGATACTTGCGGGCAAA 118814413 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | |||||| | |||| |||| || |||||||| || ||||| ||||| Sbjct 118814414 CAGCTGGAGGATGGCTGCACTCTCTCAGACTACAACATCCAGAAAGAGTCCAC 118814466 >seq11 Length=132960392 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || || || | || || || || |||| || || || || ||| Sbjct 124902026 GATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACTATCACCCTCGAGGTCGAGCCCAG 124901967 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | || | ||||| ||| || ||||||||||| || ||||| ||||| || Sbjct 124901966 TGACACCATCGAGAACGTCAAAGCAAAGATCCAAGACAAGGAAGGCATTCCTCCCGACCA 124901907 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | | || |||||||| || ||| | || ||| |||||| | || || ||||| Sbjct 124901906 GCAGAGGTTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 124901847 Query 22398 CATTCAAAAAGAATCCACC 22416 ||| || ||||| || ||| Sbjct 124901846 CATCCAGAAAGAGTCTACC 124901828 >seq20 Length=72050622 Score = 91.5 bits (100), Expect = 1e-13 Identities = 90/115 (78%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTAT-ATTTGCCGGCAA 22361 ||||||||||||||| |||| || | ||| || || || |||| || ||||| ||||| Sbjct 30853031 AAAATTCAAGACAAGTAGGGCATCCTACCTGACCAGCAGTGTCTGATAATTTGAGGGCAA 30852972 Query 22362 ACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 | || | |||||| |||||| |||| || |||||||| || ||||| |||||| Sbjct 30852971 ATAGCTGGAGGATGGCCGCACTCTCTCAGACTACAACATCCAGAAAGAGTCCACC 30852917 >seq19 Length=51387494 Score = 82.4 bits (90), Expect = 6e-11 Identities = 71/88 (81%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 22321 GGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGC 22380 ||||| ||||| || || || ||||| |||||||||||||||||| | || ||| |||| Sbjct 17138578 GGTATCCCACCTGACCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAAGATGGCCGC 17138637 Query 22381 ACCGTCTCCGATTACAACATTCAAAAAG 22408 || |||| || |||||||| || |||| Sbjct 17138638 ACTCTCTCAGACTACAACATCCAGAAAG 17138665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419404530583210