Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq21 127 4e-24 seq13 84.2 4e-11 seq8 84.2 4e-11 >seq21 Length=143691637 Score = 127 bits (140), Expect = 4e-24 Identities = 384/583 (66%), Gaps = 15/583 (3%) Strand=Plus/Minus Query 42287 CGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGA 42346 |||| |||| || |||||| ||||| ||||||||| | ||| ||||||||| || Sbjct 41473527 CGAGTACCATGATATCTGGCAGATGTATAAGAAGGCGGAAGCTTCCTTCTGGACCGCGGA 41473468 Query 42347 GGAGATTGACCTGGCCAAGGACAC--GGCCGGCTGGGAGTCACTGT---CTGAGAACGAA 42401 |||| | |||||| ||||||||| ||| |||||| || ||| | ||| | || Sbjct 41473467 GGAGGTGGACCTGTCCAAGGACATTTGGCA--CTGGGAATCCCTGAAGCCCGAGGA-GAG 41473411 Query 42402 AAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAG 42461 | |||| || | | |||| ||||| | || ||| |||||||| |||| Sbjct 41473410 AGATTTTATATCCCATG--TTCTGGTTTTCTTTGTAGCAAGTGATGGCATAGTAAATGCA 41473353 Query 42462 AACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGC 42521 ||| ||| | || | |||| || ||| || || ||||| |||| ||| Sbjct 41473352 AACTTGGTGGAGTGATTTAGCCAAGAAGTTCAGGTGACAGAAGCCCGCTGTTTCTGTGGC 41473293 Query 42522 TTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTAC 42581 ||||| || ||||| || ||| | || |||| |||| || | |||| ||| Sbjct 41473292 TTCCAAATTGCCATGGAAAACATACATTCTGGAATGTATAGTTTCCTTATTGACACTTAC 41473233 Query 42582 ATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATC 42641 || |||||| || | | | ||||| ||||| || |||||||| || || Sbjct 41473232 ATAAAAGATCCCAAAGAAAGGGAATTTCGCTTCAATGCCATTGAAACGATGCCTTGTGTC 41473173 Query 42642 AAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAG 42701 ||||||||||| || ||||| | ||||||| | | | || || | || || Sbjct 41473172 AAGAAGAAGGCAGATTGGGCCTTGCACTGGATTGGGGACAAAGCAGCTACCTATGGGGAA 41473113 Query 42702 AGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATC 42761 | | |||| |||| | || | || |||||||| |||| || || || || || Sbjct 41473112 CGTGTTGTAGTCTTTGCTGCAGCGGAAGGCATCTT-TTCT--GGTTATTTTGCATCGATA 41473056 Query 42762 TTCTGGCTCAAG-CAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAG 42820 |||||||||||| | ||| | |||||| || |||||||| || || ||||| || || Sbjct 41473055 TTCTGGCTCAAGAAACGAGGACT-GATGCCTGGCCTCACCTTTTCCAATGAACTTATTAG 41472997 Query 42821 CAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTC 42863 | || ||||| | || | || ||||||||||| ||||| Sbjct 41472996 TGGAGATGAGGGTTTACACTGTGATTTTGCCTGCCTGATGTTC 41472954 >seq13 Length=104990034 Score = 84.2 bits (92), Expect = 4e-11 Identities = 95/125 (76%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 42708 GTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGG 42767 ||||||||| | || || || ||||||||||| || || | || || || || |||||| Sbjct 9463199 GTAGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCCGGTTCTTTTGCATCGATATTCTGG 9463258 Query 42768 CTCAAG-CAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGA 42826 |||||| | ||| | |||||| || ||||| || || || ||||| |||||||| || Sbjct 9463259 CTCAAGAAACGAGGACT-GATGCCTGGCCTCACATTTTCCAATGAACTTATCAGCAGAGA 9463317 Query 42827 CGAGG 42831 |||| Sbjct 9463318 TGAGG 9463322 >seq8 Length=140346614 Score = 84.2 bits (92), Expect = 4e-11 Identities = 95/125 (76%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765 |||| |||||| | || || || || || |||||||| || | || || | || |||| Sbjct 97934857 TGGTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCAGGATCTTTTGCTGCTATATTCT 97934798 Query 42766 GGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 |||| ||| ||| |||| | ||||| |||||||| || || || |||||||||||||| Sbjct 97934797 GGCTAAAGAAGAGAGGTCTT-ATGCCAGGACTCACTTTTTCCAATGAACTCATCAGCAGA 97934739 Query 42825 GACGA 42829 || || Sbjct 97934738 GATGA 97934734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943592770687840