Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq5 95.1 1e-14 seq11 89.7 5e-13 seq7 89.7 5e-13 >seq5 Length=183742232 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || | |||||| || ||||| || || || || ||||| || || || Sbjct 52769882 ATGCCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCT 52769941 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || ||| |||| ||||| || || |||||| || |||||||| || Sbjct 52769942 GAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGT 52770001 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || || || || ||||||||||| ||||| || | || | |||||| | ||| Sbjct 52770002 GGGATACCCTCCTTGTCTTGAATTTTGGCTTTGA-CGTTCTCAATGGTGTCACTGGGCTC 52770060 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || || || | |||||||| || || || || ||||| || ||||| Sbjct 52770061 GACCTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 52770111 >seq11 Length=132960392 Score = 89.7 bits (98), Expect = 5e-13 Identities = 116/158 (73%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| |||| || ||||| || | ||||| | |||||||| || ||||||||||| || Sbjct 124902554 ATCTTCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCGGGAGGAATGCCTTCCTT 124902613 Query 45245 ATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAA 45303 |||||| || ||| ||||| || | || | |||||| | |||||| ||||| || | Sbjct 124902614 ATCTTGGATCTTTGCTTTGA-CGTTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGA 124902672 Query 45304 CCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || ||||| || || || || || || || |||||| Sbjct 124902673 TAGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATC 124902710 Score = 87.8 bits (96), Expect = 2e-12 Identities = 148/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| || ||||| || || || || ||||| || || || | ||| ||| || Sbjct 124901816 CACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTC 124901875 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 || || ||||| || | ||||| | |||||||| || ||||||||||| || ||||| Sbjct 124901876 CAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCGGGAGGAATGCCTTCCTTGTCTTG 124901935 Query 45251 AATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 || ||| ||||| || | || | |||||| | |||||| ||||| || | || | Sbjct 124901936 GATCTTTGCTTTGA-CGTTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATAGTCT 124901994 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 |||| || || || || || || || |||||| Sbjct 124901995 TGCCAGTCAGGGTCTTCACGAAGATCTGCATC 124902026 >seq7 Length=162899863 Score = 89.7 bits (98), Expect = 5e-13 Identities = 154/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || | |||||| || ||||| || || || || ||||| || || || Sbjct 148001498 ATGCCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCT 148001439 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || ||| |||| ||||| || || |||||| || |||||||| || Sbjct 148001438 GAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGT 148001379 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || || || || ||||||||||| ||||| || | |||||| | |||| Sbjct 148001378 GGGATACCCTCCTTGTCTTGAATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCG 148001319 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAAT 45334 || ||||| || | |||||||| || || || || ||||| || Sbjct 148001318 ACCTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAAGAT 148001275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451645925370640