Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq5 95.1 9e-15 seq13 87.8 1e-12 seq7 86.0 5e-12 >seq5 Length=183742232 Score = 95.1 bits (104), Expect = 9e-15 Identities = 155/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||||| || || ||| |||||| || || ||||| || || ||| | || Sbjct 52769894 AGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGAGTGCGG 52769953 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| ||| || |||||||||||||| ||||| || || | || | |||||| Sbjct 52769954 CCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCC 52770013 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGAC--GCCTCCACCTCCACCG 48726 ||||| ||| ||| | ||| | | || | | | || | ||| ||||| | | Sbjct 52770014 TTGTCTTGAAT-TTTGGCTTTGACGTTCTCA-ATGGTGTCACTGGGCTCGACCTCAAGGG 52770071 Query 48727 TAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 | || ||||| ||||| | || || ||||| |||||||| Sbjct 52770072 TGATGGTTTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 52770111 >seq13 Length=104990034 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 |||||| | ||| || || ||| |||||||||||||| ||||| | | | || | || Sbjct 67300738 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 67300679 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 |||| ||||| || ||||| ||||||| || ||||| | |||| || ||||| || Sbjct 67300678 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 67300619 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||||| |||||| | | | || || | || ||||| | || || || Sbjct 67300618 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 67300559 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| | ||||| || ||||||||||| Sbjct 67300558 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 67300526 >seq7 Length=162899863 Score = 86.0 bits (94), Expect = 5e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||||| || || ||| |||||| || || ||||| || || ||| | || Sbjct 148001486 AGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGAGTGCGG 148001427 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| ||| || |||||||||||||| ||||| || || | || | |||||| Sbjct 148001426 CCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCC 148001367 Query 48669 TTGTC 48673 ||||| Sbjct 148001366 TTGTC 148001362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380644024962582