Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq15 298 6e-76 seq2 187 3e-42 SEQ27355 185 1e-41 seq6 114 1e-20 seq7 93.3 5e-14 seq4 87.8 2e-12 >seq15 Length=108049171 Score = 298 bits (330), Expect = 6e-76 Identities = 661/986 (67%), Gaps = 13/986 (1%) Strand=Plus/Minus Query 160052 CAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGC 160111 || ||| || |||| ||| |||| ||| || | |||||| || |||| || ||||| || Sbjct 83733834 CAAATGCTCATCCAAACACTGGATGGCAAAGAGGTCAACATCCACGTCAAACTTATTGGC 83733775 Query 160112 GAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGAC 160171 |||| ||||| || | || ||||||| || ||| || | || || | ||| || Sbjct 83733774 AAACAAGTGGTGT---TTGCGCAGCATCCAGTTCAAGTCACCAGCTCCAAAAATGCACAC 83733718 Query 160172 GGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTC 160231 || || | |||||| || | ||| || ||||| | || || || | || ||||| || Sbjct 83733717 CGAGCGCACGTGCACTCCATCGCAGGGAGGGTAGGGGGCACCCTTGGAAACATCACCCTC 83733658 Query 160232 GTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTA 160291 |||| |||||||| ||||||||||| | || |||||||| || ||||| || | Sbjct 83733657 AAAGTATTGCCACTTGACAAACCTGGCAACTGCTTGCATGTCAGACAAATCGTACTTATG 83733598 Query 160292 CATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTC 160351 | | || | || || || | || || | ||| | ||||||||| || | || Sbjct 83733597 GCTGGCAGAAAGTGAGCCCGGGACTTCAGGAATCCTCTGGATGGTGGCCCAGAGATACTC 83733538 Query 160352 GTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGTCCCGCAG 160411 || |||||||| ||||| | | ||| ||||| |||| | ||| | | | || Sbjct 83733537 ATCAGGGCTGTATGTGTCTTGCGCCCACTCCATAAACTTTTGGATGTTTTCATTCTGTAG 83733478 Query 160412 AACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTAT 160471 || | || || || | || |||||||| || ||||| || || | ||| | Sbjct 83733477 TACATACCCCACATACTCCCTACTGACCACAAAGTAGGCACTGCCAGAAAAAAGAGGTGT 83733418 Query 160472 ---GGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTCACCAG 160528 | | ||| || | |||| | || ||||| | || | ||| || || | Sbjct 83733417 TTCGAGCGGAGGAAGCAT---TTTGACAGTCCCTGTGTTTGTCAGCTTTCCATTAACAAC 83733361 Query 160529 CGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAGACT 160588 | | | ||||| |||||||| | || || | |||||| | ||||| || || || Sbjct 83733360 CTCATACCGCTTTTTCCACCTTTCTTCTTTATGGGATGGCATCCTCTCCGTTTCCAGGCT 83733301 Query 160589 GTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAA 160648 ||| | || | | | || |||| | |||| || |||||||| || || | ||||| Sbjct 83733300 GTTTTCTCCCATTAACAACTTGAGCTTCCTGACAATTTCTAGGTTGGTTTTAATAGGAAA 83733241 Query 160649 GTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCT 160708 || |||| || | ||||||| ||||||||| || || |||| | | |||||| | Sbjct 83733240 ATCCATACCACAAAGATTTATCAAGTACTTCCAGTTTGCACTCATTGCATAGAGGTCCTT 83733181 Query 160709 CATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTT 160768 |||||| || | || ||||| || || ||||| || || || || || |||| | | Sbjct 83733180 CATGCAGTTGAGGTCAGCCTGAACCCGACTCCATGATGCATAAACCACACTCTCCAATCG 83733121 Query 160769 ACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAG--AAAGAAC 160826 |||||||||||||| ||| |||||| || |||| |||| ||| | ||| ||| | Sbjct 83733120 GCTGGCCACAAAGACATTACTGAAACAGGAAGCGATGCCCATCACTG-CAGCTAAATAGG 83733062 Query 160827 ATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCC 160886 | | || | ||| |||||| || | |||||| | ||||| ||| ||||||||| Sbjct 83733061 A-ATCCTCGGATTTTGTGTCCACATGAATGCAATAGAAATTCTGGGGCATATAGATGGCC 83733003 Query 160887 CTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGA 160946 || |||| ||| || | ||| || ||||| ||||| | ||| ||||| || ||||| ||| Sbjct 83733002 CTCAGCAGCCTGTCAAGCATTTCAATCTTGTGATGAACCACTATAGAATATGCTATTGGA 83732943 Query 160947 AACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAAATAA 161006 ||||| | ||| || ||| |||| | | || || || ||||||| ||| || Sbjct 83732942 AACTCTGCCTCTTCTTTACTAAGGGGTTCTACAATATATTTGCGTCTCTTGATGAAAGAA 83732883 Query 161007 TCACAATCCCGCGTCATGTTGATATA 161032 ||| || | |||||||| ||||| Sbjct 83732882 GTACAGTCACTGGTCATGTTTATATA 83732857 >seq2 Length=188283584 Score = 187 bits (206), Expect = 3e-42 Identities = 232/318 (73%), Gaps = 0/318 (0%) Strand=Plus/Minus Query 168155 AGTCAAGCACGTTTTTCCAGAAATCTTGCCTGATCCGAACGTGTTGAAGAGGCACATGAA 168214 ||| | ||| | | |||| || ||||| || || || || || |||||||| |||||| | Sbjct 32106506 AGTGAGGCAGGCTGTTCCTGAGATCTTCCCAGAACCAAAGGTATTGAAGAGACACATGTA 32106447 Query 168215 GCAGCCTTCGTCCTCCACGGTGGTATTCCAAAATGTTAGCGTTGAGTTTCGGAGGCCCAA 168274 || ||||| ||||||| |||| ||||||| || || | |||| |||| |||| |||| Sbjct 32106446 ACACCCTTCATCCTCCAGGGTGATATTCCAGAAGGTGATGGTTGTGTTTTGGAGTCCCAG 32106387 Query 168275 CTGCGTTATGTTCACACGATCTTTATAAGGAGGTTGAACTACAACGCCGTGGTTCTCGCT 168334 ||| || ||||| | || ||||| | ||| || | || || || ||||||||||| Sbjct 32106386 CTGGGTAATGTTTATCTTGTCCTTATAGGCAGGCTGGATCACCACCCCATGGTTCTCGCT 32106327 Query 168335 GAAGGTGGCCATGTTCTCCGGGCTGGTGGCCTTTATCTTCTGCCAGGTTACTATCAGAAC 168394 ||||||| ||||||| || ||||| || || | |||||||| || || ||||| || Sbjct 32106326 GAAGGTGACCATGTTTTCTGGGCTTACAGCTTTCTTTTTCTGCCATGTCACAATCAGGAC 32106267 Query 168395 CTCTTTATCGGTCTGCAGGGAACATCTCAGCGAAGCCGGAGTGTTCAGCAGTTCTCGCTC 168454 || | | | ||||| || ||||| | ||||| ||||||| |||| | |||| || Sbjct 32106266 TTCCTGGGCATTTTGCAGAGAGCATCTTAAGGAAGCAGGAGTGTACAGCTGCTCTCTTTC 32106207 Query 168455 ATCTTGAGTTACGACCTG 168472 ||| || || || || || Sbjct 32106206 ATCCTGGGTCACCACTTG 32106189 Score = 84.2 bits (92), Expect = 3e-11 Identities = 151/220 (69%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 167883 GTTTGCCGTATGTCCGTTACAGTTCCCAAATGTAGTACCTTGCATATCACCTCTCCGTTT 167942 |||||| | ||| || ||||| |||| || || |||| ||| |||||||| || Sbjct 32109053 GTTTGCTTAAAGTCAGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCC---TTC 32108997 Query 167943 CCTACTTGACTCTTTGGATCTTTTACTTGTAAAATGCTAGTTACACTTGTAGTTCCATTG 168002 || || ||| |||| || ||||| || || | ||||| || ||| || || ||||| Sbjct 32108996 CCCACCTGATTCTTAGGGTCTTTGACCTGGAGGATGCTGGTAACAGACGTGGTCCCATTT 32108937 Query 168003 CGATGTAAAACGGTTTTCGTGCTGTTCTCAATCCCTGATCCTGCCACCTTCCAGAATATT 168062 | || | | || || || || |||| |||||| | | ||||||||||| || Sbjct 32108936 GGGTGAGACAGAGTCACTGTACTATTTTCAAACCCTGACCGAGGGACCTTCCAGAAGATC 32108877 Query 168063 ACAGGAGCGGGTCGTGCTGTAGCAGAGCAGGTAATATTTA 168102 | || || || || || || |||||||| || || |||| Sbjct 32108876 ATGGGGGCTGGGCGGGCAGTGGCAGAGCAAGTGATGTTTA 32108837 >SEQ27355 Length=1036 Score = 185 bits (204), Expect = 1e-41 Identities = 279/392 (71%), Gaps = 5/392 (1%) Strand=Plus/Minus Query 160644 GGAAAGTCGGTACCGCACAAG-TTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAG 160702 ||||| || |||| || ||| ||||||| ||||||||| || || |||| | | || Sbjct 1030 GGAAAATCCATACCACAAAAGATTTATCAAGTACTTCCAGTTTGCACTCATTGCATAGAG 971 Query 160703 GTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTC 160762 |||| ||||||| || | || ||||| || || ||||| || || || || || |||| Sbjct 970 GTCCTTCATGCAGTTGAGGTCAGCCTGAACCCGACTCCATGATGCATAAACCACACTCTC 911 Query 160763 TAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAG--A 160820 | | |||||||||||||| ||| |||||| || |||| |||| ||| || || | Sbjct 910 CAATCGGCTGGCCACAAAGACATTACTGAAACAGGAAGCGATGCCCATCACTGC-AGCTA 852 Query 160821 AAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAG 160880 || | | | || | ||| |||||| || | |||||| | ||||||||| ||| Sbjct 851 AATAGGAA-TCCTCGGATTTTGTGTCCACATGAATGCAATAGAAATTCTGAGGCATATAG 793 Query 160881 ATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCT 160940 |||||||| |||| ||| || | ||| || ||||| ||||| | ||| ||||| || ||| Sbjct 792 ATGGCCCTCAGCAGCCTGTCAAGCATTTCAATCTTGTGATGAACCACTATAGAATATGCT 733 Query 160941 ATCGGAAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATA 161000 || |||||||| | ||| || ||| |||| | | || || || ||||||| Sbjct 732 ATTGGAAACTCTGCCTCTTCTTTACTAAGGGGTTCTACAATATATTTGCGTCTCTTGATG 673 Query 161001 AAATAATCACAATCCCGCGTCATGTTGATATA 161032 ||| || ||| || | |||||||| ||||| Sbjct 672 AAAGAAGTACAGTCACTGGTCATGTTTATATA 641 >seq6 Length=175400206 Score = 114 bits (126), Expect = 1e-20 Identities = 220/323 (68%), Gaps = 5/323 (2%) Strand=Plus/Plus Query 160047 TGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTA 160106 |||| |||| | || |||| |||||||| ||| || | ||||| ||| ||| | ||| Sbjct 22547745 TGTCTCAGAAGATCATCCAAACATTGGATGGCAAAGAGGTCAATGTCAATGTCAAGCTTA 22547804 Query 160107 TTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACG 160166 || || || | ||||| || | || ||||||| || ||| || | || || | | Sbjct 22547805 TTGGCAAATAAGTGGTGC---TTGCGCAGCATCCAGTTCAAGTCACCAGCTCCAAAAATG 22547861 Query 160167 CAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCA 160226 || || || | |||| | || | ||| | |||| |||| ||||| | || ||| Sbjct 22547862 CACACCGAGTGATTGTGGTCCCCATCGCA--GTAGGTAGGGAGCACCTTTGGAAACATCA 22547919 Query 160227 CCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTAT 160286 || || ||||||||||||| ||||||||||| | || |||||||| || ||| || Sbjct 22547920 CCCTCCAAGTACTGCCACTTGACAAACCTGGCAACTGCATGCATGTCAGACAAGTCATAC 22547979 Query 160287 TTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGG 160346 || | | || | | |||||| || | || |||| ||| | ||| |||| || Sbjct 22547980 TTATGGTTTGTGGAGAGTGAACCGGGGACTTCAGGAATACTCTGGATGGTATCCCAGAGA 22548039 Query 160347 TGTTCGTCGGGGCTGTACGTGTC 160369 || || || ||||||| ||||| Sbjct 22548040 TGCTCATCAGGGCTGTGTGTGTC 22548062 Score = 105 bits (116), Expect = 8e-18 Identities = 228/338 (67%), Gaps = 6/338 (2%) Strand=Plus/Plus Query 160623 ATCTCTAGGTTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCAT 160682 || |||||||| | || | ||||| || |||| || | |||| || | | ||||| Sbjct 22548314 ATTTCTAGGTTGGATTTAATGGGAAAATCCATACCACAAAGTTTTACCAAGAATTTCCAG 22548373 Query 160683 TTCGCGCTCAGGTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAG 160742 || ||| | | ||||| ||||||| || | || ||||| || ||||||| Sbjct 22548374 CCTGCAGTCATTGCTTAGAGGTCATTCATGCAGTTGAGGTCAGCCTGAACCTGGCTCCAT 22548433 Query 160743 GAAGCGTACACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACG 160802 || || || || | |||| | | || ||||||||||| ||| |||||| | | Sbjct 22548434 GATGCATAAACCATCGTCTCCAATCAGCTCGCCACAAAGACTTTACTGAAACAGAATGCA 22548493 Query 160803 ATTCCCACCACCGCC---AGAAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAA 160859 || |||| ||| || | |||| | ||||| | | ||| ||||||||| | || | Sbjct 22548494 ATGCCCATCACTGCAGCTAAAAAGGA-ATCTTCT--GATTTTTTGTCCACGTGAATGCGA 22548550 Query 160860 TACAGGTTCTGAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGA 160919 || | ||||||||| ||||||||||| || | ||| | | ||| || ||||| ||| Sbjct 22548551 TAGAAATTCTGAGGCATATAGATGGCCCTCAGTAGCCTGTAAAGCATTTCAATCTTGTGA 22548610 Query 160920 TGGATCACGATAGAGTAGGCTATCGGAAACTCGGTCTC 160957 || | | ||||| || ||| | ||||||| | ||| Sbjct 22548611 TGAACTGCTATAGAATATGCTGTTTGAAACTCCGCCTC 22548648 >seq7 Length=162899863 Score = 93.3 bits (102), Expect = 5e-14 Identities = 196/290 (68%), Gaps = 7/290 (2%) Strand=Plus/Minus Query 160097 GTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGA 160156 ||| || || || || ||||| || || ||| || || |||||||||| ||| || | Sbjct 33965182 GTCAAACTTGTTGGCCAACAGGTGATG---GTTTTGAAGCATCCAGTGCAAGTCCCCAGC 33965126 Query 160157 CCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTT 160216 ||| | || |||| | || ||| | || |||||| | || |||| || || Sbjct 33965125 CCCATAAACACAGATAGCCCGCTGGTGGATTCCAGAGCAAGGGGCATAAGGAGCACCCTT 33965066 Query 160217 CGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGA 160276 | | || || || | | ||||||||| || | |||||| || | |||||| || Sbjct 33965065 ATCGATATCTCCCTCATGATCCTGCCACTTGACCAGCCTGGCAATAGAAGTCATGTCTGA 33965006 Query 160277 GGTGTCGTATTTGTACATCAGGGGAACGGCACCGGGAA--CGCCGGGCATACGCTGTAGG 160334 | ||||||| ||| |||||| | || || | | ||| ||| ||||| ||| Sbjct 33965005 GATGTCGTACTTGGGGTGGTTGGGAACAGAGCCAGGCATCCACCGTGCA--CGCTGAAGG 33964948 Query 160335 GTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCAT 160384 |||||||| |||||||| || ||||| || ||||| || |||||| || Sbjct 33964947 GTGGCCCAGAGGTGTTCATCAGGGCTATAGGTGTCTTTTACCCATTCAAT 33964898 >seq4 Length=166074386 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/234 (69%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104 |||||| |||||| | |||| ||| |||| |||||| | ||||| | | || || | Sbjct 59987928 TGTGTCTCAGATGCTTATCCAAACACTGGATGGCGAAAAGGTCAATATACACATCAAACT 59987869 Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCG-AAC 160163 |||| || ||||| ||||| || | || ||||||| || |||||| | | | || Sbjct 59987868 TATTGGCAAACAGGTGGTGC---TTGAGCAGCATCCAGTTCAAGTCTCCAGCTCTGGAAA 59987812 Query 160164 ACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACG 160223 ||||| | || | ||||| || || | ||| | || | |||| || | | || Sbjct 59987811 ACGCACATTGAGCACATGTGGACTCCATCGCAGGATGGTCATGGAGCACCCTAGGAAACA 59987752 Query 160224 TCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAG 160277 |||| || |||||| |||||| ||| | || || || | |||||||||||| Sbjct 59987751 TCACACTCAAAGTACTACCACTTGACAGAGCTAGCAATTGTGTGCATGTCGGAG 59987698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576762951513840