Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq15 116 7e-21 seq13 116 7e-21 seq11 91.5 3e-13 seq10 91.5 3e-13 seq21 87.8 3e-12 >seq15 Length=108049171 Score = 116 bits (128), Expect = 7e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 || ||||| | |||| ||| || |||||| ||||| || || || | ||| || Sbjct 106343122 ACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATCTTCC 106343063 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 | ||| || || ||||| || | ||| || ||||||||||| |||||||| ||||| || Sbjct 106343062 AGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 106343003 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 || |||| |||| |||| | ||||| || | |||||||| || || || || || Sbjct 106343002 ATCTTGGCCTTTACATTTTCTGTCGTATCCGAGGGTTCAACTTCGAGGGTGATGGTCTTC 106342943 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || || ||||| || || || |||||||| Sbjct 106342942 CCCGTAAGGGTTTTCACGAAAATCTGCATTTT 106342911 Score = 95.1 bits (104), Expect = 2e-14 Identities = 149/212 (70%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 || ||||| | |||| ||| || ||| || ||||| || || || | ||| || Sbjct 64068049 ACGAGATGAAGAGTAGACTCCTTTTGAAT-TTGTAGTCAGACAAAGTACGTCCATCTTCC 64068107 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 | ||| || || ||||| || | ||| || ||||||||||| |||||||| ||||| || Sbjct 64068108 AGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 64068167 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 || | || |||| |||| | || ||||| || | ||| | || || || || || || Sbjct 64068168 ATCTCGGCCTTTACATTTTATATCGTATCCGAGGGTTCAGCCTCGAGGGTGATGGTCTTC 64068227 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 | || || ||||| | || || |||||||| Sbjct 64068228 TCCGTAAGGGTTTTCATGAAAATCTGCATTTT 64068259 >seq13 Length=104990034 Score = 116 bits (128), Expect = 7e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 || ||||| | |||| ||| || |||||| ||||| || || || | ||| || Sbjct 67300734 ACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATCTTCC 67300675 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 | ||| || || ||||| || | ||| || ||||||||||| |||||||| ||||| || Sbjct 67300674 AGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 67300615 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 || |||| |||| |||| || ||||| || | ||||| || || || || || || Sbjct 67300614 ATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTC 67300555 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || || ||||| || || || |||||||| Sbjct 67300554 CCCGTAAGGGTTTTCACGAAAATCTGCATTTT 67300523 >seq11 Length=132960392 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || |||||||| | || || ||||| ||||| || | |||||| || || ||||| Sbjct 124902480 ATCCCACCTCTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCA 124902539 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | ||| || | || ||||||||||| || || ||||| || || ||| Sbjct 124902540 GACAGGGTGCGTCCATCTTCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCGGGA 124902599 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| |||||||| || || | ||| | || || || || | ||| Sbjct 124902600 GGAATGCCTTCCTTATCTTGGATCTTTGCTTTGACGTTCTCGATGGTGTCACTGGGCTCG 124902659 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || ||||| || || || || || || || || || ||||| Sbjct 124902660 ACCTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 124902709 Score = 86.0 bits (94), Expect = 1e-11 Identities = 161/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 || ||| | ||| || ||||| || || |||| |||| || | |||||| || || Sbjct 124901561 AACTTAGACACCCCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTT 124901620 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || | || | ||| || | || ||||||||||| || | ||||| || Sbjct 124901621 GTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTG 124901680 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||||| || ||||| || || || || || | || | |||| |||||| || Sbjct 124901681 GTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATAGTGTCACT 124901740 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||| || || || || || || || || || || || || || || || ||||| Sbjct 124901741 GGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 124901797 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || |||||||| | || || ||||| |||| |||| |||||| || || ||||| Sbjct 124901796 ATCCCACCTCTGAGACGGAGCACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAGTCA 124901855 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | ||| || | || ||||||||||| || || ||||| || || ||| Sbjct 124901856 GACAGGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCGGGA 124901915 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| || || | ||| | || || || || | ||| Sbjct 124901916 GGAATGCCTTCCTTGTCTTGGATCTTTGCTTTGACGTTCTCGATGGTGTCACTGGGCTCG 124901975 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || ||||| || || || || || || || || || ||||| Sbjct 124901976 ACCTCGAGGGTGATAGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 124902025 >seq10 Length=91330067 Score = 91.5 bits (100), Expect = 3e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || ||||| || || ||||| || | ||| || ||||||||||| |||||||| || Sbjct 27255463 ATCTTCCAATTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 27255522 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||| || || |||| |||| |||| | || | | | ||||| || || || || Sbjct 27255523 ATCCTGGATATTGGCCTTTACATTTTCTGTTGTGTTCAAGGGTTCAACCTCAAGGGTGAT 27255582 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTT 193362 || || ||||| || ||||| || || || ||||||| Sbjct 27255583 GGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTT 27255620 >seq21 Length=143691637 Score = 87.8 bits (96), Expect = 3e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 193221 CCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTT 193280 || ||||| || | ||| || ||||||||||| |||||||| ||||| || || |||| Sbjct 1076579 CCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCC 1076520 Query 193281 TTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGC 193340 |||| |||| ||||| || | ||||| || || || ||||| || || |||| Sbjct 1076519 TTTACATTTTCTGCCGTATCTGAGGGTTCAACCTCAAGGGTGATAGTCTTCCCCCTTAGG 1076460 Query 193341 GTTTTTACAAATATTTGCATTTT 193363 ||||| | || || |||||||| Sbjct 1076459 GTTTTCATGAAAATCTGCATTTT 1076437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 898943290670880