Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq15 136 8e-27 seq13 136 8e-27 seq17 118 2e-21 seq8 109 1e-18 seq21 102 2e-16 seq10 100 6e-16 seq16 98.7 2e-15 >seq15 Length=108049171 Score = 136 bits (150), Expect = 8e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | ||||| ||| ||| || ||||| || |||| Sbjct 106343141 ACCACCACGAAGTCTCAAAACAAGATGAAGAGTAGACTCCTTTTGA-ATATTGTAGTCAG 106343083 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || || ||| |||| |||| ||| || ||||||||||| | ||| || |||||||| | Sbjct 106343082 ACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAG 106343023 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| ||||| || || || |||||||| | | | ||| || | ||| | Sbjct 106343022 GAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTCGTATCCGAGGGTTCAA 106342963 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 |||| || || ||||| || || || | ||||| | || ||||||||||| Sbjct 106342962 CTTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 106342911 Score = 120 bits (132), Expect = 6e-22 Identities = 168/232 (72%), Gaps = 3/232 (1%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | ||||| ||| ||| || || || || |||| Sbjct 64068030 ACCACCACGAAGTCTCAACACGAGATGAAGAGTAGACTCCTTTTGA-AT-TTGTAGTCAG 64068087 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || || ||| |||| |||| ||| || ||||||||||| | ||| || |||||||| | Sbjct 64068088 ACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAG 64068147 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| ||||| || || | |||||||| ||| | ||| || | ||| Sbjct 64068148 GAATTCCTTCCTTATCCTGGATCTCGGCCTTTACATTTTATATCGTATCCGAGGGTTCAG 64068207 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 | || || || ||||| || | || | ||||| || || ||||||||||| Sbjct 64068208 CCTCGAGGGTGATGGTCTTCTCCGTAAGGGTTTTCATGAAAATCTGCATTTT 64068259 >seq13 Length=104990034 Score = 136 bits (150), Expect = 8e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | ||||| ||| ||| || ||||| || |||| Sbjct 67300753 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATATTGTAGTCAG 67300695 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || || ||| |||| |||| ||| || ||||||||||| | ||| || |||||||| | Sbjct 67300694 ACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAG 67300635 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| ||||| || || || |||||||| ||| | ||| || | ||| | Sbjct 67300634 GAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAA 67300575 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 | || || || ||||| || || || | ||||| | || ||||||||||| Sbjct 67300574 CCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 67300523 >seq17 Length=91399201 Score = 118 bits (130), Expect = 2e-21 Identities = 166/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 192308 TACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAG 192367 || |||| | ||| | ||| || | ||| | ||||| ||| || ||||| || |||| Sbjct 61604602 TAGCACCACGAAGTCTTAACACAAGATGAAGAGTAGACTCCTTTTCAATATTGTAGTCAG 61604543 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || || | | |||| |||| ||| || ||||||||||| ||| || ||| |||| | Sbjct 61604542 ACAAAGTCCATGCATCTTCCACTTGCTTGCCAGCAAAGATCCCTCTTTGCTGAGCAGGAG 61604483 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| ||||| || || | |||||||| ||| | ||| || | ||| | Sbjct 61604482 GAATTCCTTCCTTATCCTGGATCTCGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAA 61604423 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 | || || || ||||| || || || | ||||| || || ||||||||||| Sbjct 61604422 CATCAAGGGTGATGGTCTT-CCCGTAAGGGTTTTCATGAAAATCTGCATTTT 61604372 >seq8 Length=140346614 Score = 109 bits (120), Expect = 1e-18 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | ||||| ||| ||| || |||| || |||| Sbjct 71113604 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAC-TATTGTAGTCAG 71113662 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || || ||| |||| |||| ||| || ||||||||||| | ||| | || ||| | Sbjct 71113663 ACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTACGGAGCAGAAG 71113722 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| || || || || || |||||||| ||| | ||| || | ||| | Sbjct 71113723 GAATTCCTTCCTTCTCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAA 71113782 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 | || || || ||||| || || || | ||||| | || ||||||||||| Sbjct 71113783 CCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 71113834 >seq21 Length=143691637 Score = 102 bits (112), Expect = 2e-16 Identities = 149/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 192333 ATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATT 192391 ||| | ||||| ||| ||| || || || | ||||| || || ||| | || |||| | Sbjct 1076643 ATGAAGAGTAGGCTCCTTTTGA-ATGTTGCAGTCAGACAAAGTACGTCCGTCTTCCAGTC 1076585 Query 192392 GTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTT 192451 | | ||||||||||| | ||| || |||||||| || |||||||| ||||| || || | Sbjct 1076584 GCTCGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCT 1076525 Query 192452 TATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAG 192511 | |||||||| | | |||||| | ||| || || || || || || || || Sbjct 1076524 TGGCCTTTACATTTTCTGCCGTATCTGAGGGTTCAACCTCAAGGGTGATAGTCTTCCCCC 1076465 Query 192512 TTAATGTTTTAATAAATATCTGCATTTT 192539 ||| ||||| || || ||||||||||| Sbjct 1076464 TTAGGGTTTTCATGAAAATCTGCATTTT 1076437 >seq10 Length=91330067 Score = 100 bits (110), Expect = 6e-16 Identities = 151/210 (72%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 192333 ATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATT 192391 ||| ||||||| ||| ||| || || | || ||||| || || | | |||| |||| || Sbjct 50557385 ATGAAAAGTAGACTCCTTTTGA-ATGTG-TAGTCAGACAAAGTACATCCATCCTCCAGTT 50557328 Query 192392 G--TTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTAT 192449 | ||| | ||||||||| | ||| || |||||| || |||||||| ||||| || || Sbjct 50557327 GCTTTTGCTAGCAAAGATCAGTCTTTGCCCATCAGGAGGAATTCCTTCCTTATCCTGGAT 50557268 Query 192450 TTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACC 192509 || |||||||| | | | |||||| | ||| || || || || ||||| || || Sbjct 50557267 CTTGGCCTTTACATTTTCTGTCGTATCTGAGGGTTCAACCTCGAGGGTGATGGTCTTCCC 50557208 Query 192510 AGTTAATGTTTTAATAAATATCTGCATTTT 192539 || | ||||| | || ||||||||||| Sbjct 50557207 TGTAAGGGTTTTCGTGAAAATCTGCATTTT 50557178 Score = 91.5 bits (100), Expect = 3e-13 Identities = 159/231 (69%), Gaps = 13/231 (6%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | ||||| ||| ||| || || || || |||| Sbjct 27255402 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATGTTGTAGTCAG 27255460 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | |||| |||||||| || ||||||||||| | ||| || |||||||| | Sbjct 27255461 A-----------CATCTTCCAATTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAG 27255509 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| ||||| || || || |||||||| | | | | | | ||| | Sbjct 27255510 GAATTCCTTCCTTATCCTGGATATTGGCCTTTACATTTTCTGTTGTGTTCAAGGGTTCAA 27255569 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTT 192538 | || || || ||||| || || || | ||||| | || |||||||||| Sbjct 27255570 CCTCAAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTT 27255620 >seq16 Length=74961506 Score = 98.7 bits (108), Expect = 2e-15 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 192325 AATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCA 192384 || || ||||| | ||||| |||||| ||||| || ||| | || ||| |||| Sbjct 9947277 AACACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGTCAAA----GTACGTCCATCT 9947222 Query 192385 TCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCT 192444 |||| ||| || ||||||||||| |||||| || |||| || |||||||| ||| | Sbjct 9947221 TCCAGTTGCTTGCCAGCAAAGATCGGTCTCTGCCGACCAGGAGGAATTCCTTCCTTAACC 9947162 Query 192445 TGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTT 192504 || || || |||||||| ||| ||| || | ||| || || || || ||||| Sbjct 9947161 TGGATCTTGGCCTTTACATTTTATATCATATCCGAGGGTTCAACCTCGAGGGTGATGGTC 9947102 Query 192505 TTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || || || | ||| | | || ||||||||||| Sbjct 9947101 TTCCCTGTAAGGGTTATCACGAAAATCTGCATTTT 9947067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 983682388455900