Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq15 136 7e-27 seq13 136 7e-27 seq17 118 2e-21 seq21 109 1e-18 seq8 109 1e-18 seq16 104 4e-17 seq10 96.9 6e-15 seq6 87.8 3e-12 >seq15 Length=108049171 Score = 136 bits (150), Expect = 7e-27 Identities = 174/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 |||| || |||||| | ||||| || || | ||| | ||||| ||| || |||||| Sbjct 106343150 TTTCTTAGCACCACCACGAAGTCTCAAAACAAGATGAAGAGTAGACTCCTTTTGAATATT 106343091 Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952 || || || |||| ||| | || |||| ||| || |||||||| || | ||| || || Sbjct 106343090 GTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTG 106343031 Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012 ||||| || |||||||| ||||| || || || |||||||| | | ||||| || Sbjct 106343030 ATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTCGTATCCGA 106342971 Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | ||| ||||| || || ||||| || || || | ||||| | ||| ||||||||||| Sbjct 106342970 GGGTTCAACTTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 106342911 Score = 118 bits (130), Expect = 2e-21 Identities = 171/240 (71%), Gaps = 1/240 (0%) Strand=Plus/Plus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 |||| || |||||| | ||||| || || | ||| | ||||| ||| || ||| || Sbjct 64068021 TTTCTTAGCACCACCACGAAGTCTCAACACGAGATGAAGAGTAGACTCCTTTTGAAT-TT 64068079 Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952 || || || |||| ||| | || |||| ||| || |||||||| || | ||| || || Sbjct 64068080 GTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTG 64068139 Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012 ||||| || |||||||| ||||| || || | |||||||| ||| ||||| || Sbjct 64068140 ATCAGGAGGAATTCCTTCCTTATCCTGGATCTCGGCCTTTACATTTTATATCGTATCCGA 64068199 Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | ||| | || || || ||||| || | || | ||||| ||||| ||||||||||| Sbjct 64068200 GGGTTCAGCCTCGAGGGTGATGGTCTTCTCCGTAAGGGTTTTCATGAAAATCTGCATTTT 64068259 >seq13 Length=104990034 Score = 136 bits (150), Expect = 7e-27 Identities = 174/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 |||| || |||||| | ||||| || || | ||| | ||||| ||| || |||||| Sbjct 67300762 TTTCTTAGCACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATT 67300703 Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952 || || || |||| ||| | || |||| ||| || |||||||| || | ||| || || Sbjct 67300702 GTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTG 67300643 Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012 ||||| || |||||||| ||||| || || || |||||||| ||| ||||| || Sbjct 67300642 ATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGA 67300583 Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | ||| || || || || ||||| || || || | ||||| | ||| ||||||||||| Sbjct 67300582 GGGTTCAACCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 67300523 >seq17 Length=91399201 Score = 118 bits (130), Expect = 2e-21 Identities = 166/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 171841 TACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTG 171900 || |||| | ||||| ||| || | ||| | ||||| ||| || |||||| || || | Sbjct 61604602 TAGCACCACGAAGTCTTAACACAAGATGAAGAGTAGACTCCTTTTCAATATTGTAGTCAG 61604543 Query 171901 ATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTG 171960 | |||| | | | || |||| ||| || |||||||| || ||| || || |||| | Sbjct 61604542 ACAAAGTCCATGCATCTTCCACTTGCTTGCCAGCAAAGATCCCTCTTTGCTGAGCAGGAG 61604483 Query 171961 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTA 172020 | |||||||| ||||| || || | |||||||| ||| ||||| || | ||| | Sbjct 61604482 GAATTCCTTCCTTATCCTGGATCTCGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAA 61604423 Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | || || || ||||| || || || | ||||| ||||| ||||||||||| Sbjct 61604422 CATCAAGGGTGATGGTCTTCCC-GTAAGGGTTTTCATGAAAATCTGCATTTT 61604372 >seq21 Length=143691637 Score = 109 bits (120), Expect = 1e-18 Identities = 168/240 (70%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 |||| || | |||| | ||||| || | | ||| | ||||| ||| || ||| || Sbjct 1076676 TTTCTTAGCAACACCACAAAGTCTCAACAAAAGATGAAGAGTAGGCTCCTTTTGAATGTT 1076617 Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952 | || || |||| ||| |||| |||| | | | |||||||| || | ||| || || Sbjct 1076616 GCAGTCAGACAAAGTACGTCCGTCTTCCAGTCGCTCGCCAGCAAAGATCAGTCTTTGCTG 1076557 Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012 ||||| || |||||||| ||||| || || || |||||||| | |||||||| Sbjct 1076556 ATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGCCGTATCTGA 1076497 Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | ||| || || || || || || || || ||| ||||| ||||| ||||||||||| Sbjct 1076496 GGGTTCAACCTCAAGGGTGATAGTCTTCCCCCTTAGGGTTTTCATGAAAATCTGCATTTT 1076437 >seq8 Length=140346614 Score = 109 bits (120), Expect = 1e-18 Identities = 168/240 (70%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 |||| || |||||| | ||||| || || | ||| | ||||| ||| || | |||| Sbjct 71113595 TTTCTTAGCACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGACTATT 71113654 Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952 || || || |||| ||| | || |||| ||| || |||||||| || | ||| | | Sbjct 71113655 GTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTACGG 71113714 Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012 ||| || |||||||| || || || || || |||||||| ||| ||||| || Sbjct 71113715 AGCAGAAGGAATTCCTTCCTTCTCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGA 71113774 Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | ||| || || || || ||||| || || || | ||||| | ||| ||||||||||| Sbjct 71113775 GGGTTCAACCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 71113834 >seq16 Length=74961506 Score = 104 bits (114), Expect = 4e-17 Identities = 167/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 |||| || | |||| | |||| || || ||||| | ||||| |||||| |||||| Sbjct 9947302 TTTCTTAGCAGCACCACGGAGTCTCAACACAAAATGAAGAGTAGACTCTTTTTGAATATT 9947243 Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952 || || |||| ||| | || |||| ||| || |||||||| || |||||| | Sbjct 9947242 GTAGTC----AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTCTGCCG 9947187 Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012 |||| || |||||||| ||| | || || || |||||||| ||| |||| || Sbjct 9947186 ACCAGGAGGAATTCCTTCCTTAACCTGGATCTTGGCCTTTACATTTTATATCATATCCGA 9947127 Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | ||| || || || || ||||| || || || | ||| | | ||| ||||||||||| Sbjct 9947126 GGGTTCAACCTCGAGGGTGATGGTCTTCCCTGTAAGGGTTATCACGAAAATCTGCATTTT 9947067 >seq10 Length=91330067 Score = 96.9 bits (106), Expect = 6e-15 Identities = 168/242 (69%), Gaps = 3/242 (1%) Strand=Plus/Minus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 |||| || |||||| | |||| | || | ||| ||||||| ||| || ||| | Sbjct 50557418 TTTCTTAGCACCACCACGAAGTGTCGACACAAGATGAAAAGTAGACTCCTTTTGAATGTG 50557359 Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTG--TTTACCAGCAAAAATTAATCTCTGT 171950 || || || |||| | | | || |||| ||| ||| | |||||| || | ||| || Sbjct 50557358 -TAGTCAGACAAAGTACATCCATCCTCCAGTTGCTTTTGCTAGCAAAGATCAGTCTTTGC 50557300 Query 171951 TGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCT 172010 ||||| || |||||||| ||||| || || || |||||||| | | |||||| Sbjct 50557299 CCATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTCGTATCT 50557240 Query 172011 GACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || | ||| || || || || ||||| || || || | ||||| |||| ||||||||| Sbjct 50557239 GAGGGTTCAACCTCGAGGGTGATGGTCTTCCCTGTAAGGGTTTTCGTGAAAATCTGCATT 50557180 Query 172071 TT 172072 || Sbjct 50557179 TT 50557178 >seq6 Length=175400206 Score = 87.8 bits (96), Expect = 3e-12 Identities = 161/234 (69%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||| | ||||| || || | | |||| | ||| || ||| ||||| || || Sbjct 132579281 ACCACCACAAAGTCTCAACACAAGAC---AAGTGGACTCCTTTTGAATGTTATAGTCAGA 132579337 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT---CTGTTGGTCAGG 171958 |||| | | |||| |||| ||| || |||||||| || | ||| || |||||||| Sbjct 132579338 CAAAGCACATCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTACTACTGGTCAGG 132579397 Query 171959 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTC 172018 | |||||||| ||||| || || || ||||||||| | | |||| | | ||| Sbjct 132579398 AGAAATTCCTTCCTTATCCTGGATCTTGGCTTTTACATT--TCCTTGTATTCAAGGGTTC 132579455 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || |||| |||| ||| | | || | | | ||||| ||||||||||| Sbjct 132579456 AACCTCAAGAGCGATGGCTTTCTCCATAAAGGGTGTTATGAAAATCTGCATTTT 132579509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904420557877200