Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq21 87.8 5e-12 seq16 87.8 5e-12 >seq21 Length=143691637 Score = 87.8 bits (96), Expect = 5e-12 Identities = 356/553 (64%), Gaps = 11/553 (2%) Strand=Plus/Minus Query 133076 TTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAACAGCAAGAT 133135 ||||| || ||||| | || || | || || |||||||||||||| || | ||| | Sbjct 41473544 TTTGTCATCTTCCCCACCGAGTACCATGATATCTGGCAGATGTATAAGAAGGCGGAAGCT 41473485 Query 133136 TTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGGAAGCCCTT 133195 | || ||||| | || || || | ||||| ||| ||||||||| |||| Sbjct 41473484 TCCTTCTGGACCGCGGAGGAGGTGGACCTGTCCAAGGACATTTGGCACTGGGAATCCCTG 41473425 Query 133196 ACTGGGGATGAAAAACATTTTAT-TTCTATGATTTTAGCGTTTTTTGCTGCGAGTGATGG 133254 | || || | | ||||||| | | ||| || | | || |||| || |||||||| Sbjct 41473424 AAGCCCGAGGAGAGAGATTTTATATCCCATG-TTCTGGTTTTCTTTGTAGCAAGTGATGG 41473366 Query 133255 TATTGTTCTTGAAAATTTAGGAACACGGTTTATGGGAGAAGTTCAACTGGCCGAAGCCCG 133314 || || || ||| || | | |||| ||||||||| || | |||||||| Sbjct 41473365 CATAGTAAATGCAAACTTGGTGGAGTGATTTAGCCAAGAAGTTCAGGTGACAGAAGCCCG 41473306 Query 133315 TGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTCT 133374 || | ||| | || ||||| |||||||| || |||||| | ||| | || Sbjct 41473305 CTGTTTCTGTGGCTTCCAAATTGCCATGGAAAACATACATTCTGGAATGTATAGTTTCCT 41473246 Query 133375 AATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACGCCATT--AGC 133432 ||||| |||||||| |||||| || | | | | | ||||| |||||| | | Sbjct 41473245 TATTGACACTTACATAAAAGATCCCAAAGAAAGGGAATTTCGCTTCAATGCCATTGAAAC 41473186 Query 133433 GAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGT 133492 || | |||||| | || ||||| | || ||||| | | ||||| |||||| Sbjct 41473185 GA--TGCCTTGTGTCAAGAAGAAGGCAGATTGGGCCTTGCACTGGATTGGGGACAAAGCA 41473128 Query 133493 GCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGT 133552 || | | || ||| | || | ||||||| || || ||||| |||| |||| Sbjct 41473127 GCTACCTATGGGGAACGTGTTGTAGTCTTTGCTGCAGCGGAAGGCATCTTTT---CTGGT 41473071 Query 133553 GCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTC 133611 || ||| || || || ||||| || || || || | | ||||| || ||||| Sbjct 41473070 -TATTTTGCATCGATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACCTTTTC 41473012 Query 133612 TAACGAACTTATT 133624 || ||||||||| Sbjct 41473011 CAATGAACTTATT 41472999 >seq16 Length=74961506 Score = 87.8 bits (96), Expect = 5e-12 Identities = 159/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666 |||||| || || || ||||| || ||||| || || ||||||| ||||| || || Sbjct 7201571 ACCAGTCTCAGCAGTCTTGACAGCCGTGTCAATGAGCCCCTCACGACCCCCCATGGCGTG 7201512 Query 302667 GAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGC 302726 ||| || | ||| || || || | | ||||| |||| || || ||||| Sbjct 7201511 GAAAAAGAACTCGGTGGGGGTGAGGCCGGCTAGGTAGGAGTTCTCCACAAAGCCACGGCT 7201452 Query 302727 CTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGG 302786 ||||||| || ||| |||| | ||||| ||||| |||| || || |||| |||| Sbjct 7201451 CTCGGGCCCATAGTCATCCTTGATGAAGTGAGGCAGAGTCCGGTGCTTGAAGCCAAATGG 7201392 Query 302787 GATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAA 302839 || || || || || ||||||||||| || | | | ||| | ||| |||| Sbjct 7201391 AATCCGTTTGCCCTCCACGTTCTGCTGCCCGACGACAGCAATGACCTGGGAAA 7201339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1470625154537858