Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq16 86.0 5e-12 seq13 84.2 2e-11 >seq16 Length=74961506 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || || || | || ||||| ||||| ||| | ||| |||| | | Sbjct 15840179 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 15840120 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || || ||||| |||||||||||| | ||| || ||| Sbjct 15840119 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCCGACCAG 15840060 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | ||| || || |||||||| || | | || | | ||||||||| Sbjct 15840059 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAAC 15840000 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || |||||||| || ||||| |||| || | || |||| || Sbjct 15839999 ATCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGAGGTGG 15839953 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || || || | || ||||| ||||| ||| | ||| |||| | | Sbjct 15840407 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 15840348 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || || ||||| |||||||||||| | ||| || ||| Sbjct 15840347 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCCGACCAG 15840288 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | ||| || || |||||||| || | | || | | ||||||||| Sbjct 15840287 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAAC 15840228 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || |||||||| || ||||| |||| || | || |||| || Sbjct 15840227 ATCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGCCTGAGAGGTGG 15840181 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || ||||| || || | || ||||| ||||| ||| | || |||| | | Sbjct 15839951 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTTGAGGTGGAGCCCAGT 15839892 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || || ||||| |||||||||||| | ||| || ||| Sbjct 15839891 GACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAAGAAGGCATCCCCCCCGACCAG 15839832 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | ||| || || |||||||| || | | || | | ||||||||| Sbjct 15839831 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTCTCTGACTACAAC 15839772 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764 || || |||||||| || ||||| |||| Sbjct 15839771 ATCCAGAAGGAGTCGACCCTGCACCTGGT 15839743 >seq13 Length=104990034 Score = 84.2 bits (92), Expect = 2e-11 Identities = 163/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 |||||||| ||||| || ||||| | || || || ||||| ||| |||| || | Sbjct 67300523 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 67300582 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 ||||| | | | ||||| ||||| ||||| ||||| | || ||| Sbjct 67300583 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 67300642 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 ||||| ||||| || | ||| || || || ||||| || | || || | |||||| Sbjct 67300643 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 67300702 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAAA 107792 || ||||||||||||||||| | || | ||||||||| | || || || ||| ||| Sbjct 67300703 AATATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGGTGCTAAGAAA 67300762 Query 107793 A 107793 | Sbjct 67300763 A 67300763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398569399860226