Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq13 114 1e-20 seq15 113 3e-20 seq21 98.7 8e-16 seq16 98.7 8e-16 seq10 95.1 9e-15 seq8 93.3 3e-14 seq17 87.8 1e-12 seq7 87.8 1e-12 >seq13 Length=104990034 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| || || || |||||||| || || || | | || || ||| Sbjct 67300738 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 67300679 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | |||| |||||||||||| || ||||| || || || || Sbjct 67300678 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 67300619 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || | || || ||| |||||| || || || |||| || || || || || || Sbjct 67300618 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 67300559 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || | |||||| || || ||||||||||| Sbjct 67300558 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 67300523 >seq15 Length=108049171 Score = 113 bits (124), Expect = 3e-20 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 |||||| || || || |||||||| || || || | | || || ||| || ||||| Sbjct 106343117 ATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTG 106343058 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 ||||||||| | |||| |||||||||||| || ||||| || || || || || | || Sbjct 106343057 CTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTT 106342998 Query 29703 TTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 || ||| ||||| || || || |||| ||||| || || || || || || || Sbjct 106342997 GGCCTTTACATTTTCTGTCGTATCCGAGGGTTCAACTTCGAGGGTGATGGTCTTCCCCGT 106342938 Query 29763 TAAGGTTTTAACAAATATCTGCATTTT 29789 | |||||| || || ||||||||||| Sbjct 106342937 AAGGGTTTTCACGAAAATCTGCATTTT 106342911 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/215 (71%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 29573 GCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAAT 29632 |||| |||| || | ||||| | |||||| ||||| || || | | |||| || Sbjct 53408085 GCAGAACCAGGTGCACGGTGGACTGTTTTTGGATGTTGTAGTCTGAGAGAGTGCAGCCAT 53408144 Query 29633 CATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGT 29692 | || || |||||||||||| |||||| | ||||| || || || ||||||||||||| Sbjct 53408145 CCTCCAGCTGTTTGCCAGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCTTTGT 53408204 Query 29693 CTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 |||| |||||| | ||||| | | || |||| | | || || ||||| | || Sbjct 53408205 CTTG-AATTTTGGCTTTGAAATTCTCAGTGGTGTAACTGGGCTCGACCTCAAGGATGATG 53408263 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || | ||| | ||||| | |||||| Sbjct 53408264 GTCTTGCCCGTGAGGGTCTCCACAAAGAGCTGCAT 53408298 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/216 (69%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| || || || |||||||| || || || | | || || ||| Sbjct 64068045 CAACACGAGATGAAGAGTAGACTCCTTTTGAAT-TTGTAGTCAGACAAAGTACGTCCATC 64068103 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | |||| |||||||||||| || ||||| || || || || Sbjct 64068104 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 64068163 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || | | || ||| ||| || || || || |||| | || || || || || Sbjct 64068164 CTGGATCTCGGCCTTTACATTTTATATCGTATCCGAGGGTTCAGCCTCGAGGGTGATGGT 64068223 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || | || | |||||| | || ||||||||||| Sbjct 64068224 CTTCTCCGTAAGGGTTTTCATGAAAATCTGCATTTT 64068259 >seq21 Length=143691637 Score = 98.7 bits (108), Expect = 8e-16 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 |||||| || | || ||||||||||| | || | | || || || || ||| | Sbjct 1076643 ATGAAGAGTAGGCTCCTTTTGAATGTTGCAGTCAGACAAAGTACGTCCGTCTTCCAGTCG 1076584 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 | ||||||| | |||| |||||||||||| || ||||| || || || || || | || Sbjct 1076583 CTCGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTT 1076524 Query 29703 TTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 || ||| ||||| | || || || |||| || ||||| || ||||| || || | Sbjct 1076523 GGCCTTTACATTTTCTGCCGTATCTGAGGGTTCAACCTCAAGGGTGATAGTCTTCCCCCT 1076464 Query 29763 TAAGGTTTTAACAAATATCTGCATTTT 29789 || |||||| | || ||||||||||| Sbjct 1076463 TAGGGTTTTCATGAAAATCTGCATTTT 1076437 >seq16 Length=74961506 Score = 98.7 bits (108), Expect = 8e-16 Identities = 156/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 29566 CTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTG 29625 |||| ||||| |||| || || || || ||||| || ||||| || || | || ||| Sbjct 15840413 CTCAGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTG 15840472 Query 29626 CGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCC 29685 || ||| || || || ||||| ||| | || | || ||||| || || ||||| || Sbjct 15840473 CGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCT 15840532 Query 29686 TCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGA 29745 || || || || | ||| || ||| |||| | |||||| | || || ||||| Sbjct 15840533 TCCTTATCCTGGATTTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGG 15840592 Query 29746 GTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || ||||| || | ||| || || || ||||||||||| Sbjct 15840593 GTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTT 15840636 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/216 (69%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| |||||||| || || ||||||||||| || || || || || || ||| Sbjct 9947278 CAACACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGTCA--AA--GTACGTCCATC 9947223 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | ||| ||| ||| || | || ||||| || || || | Sbjct 9947222 TTCCAGTTGCTTGCCAGCAAAGATCGGTCTCTGCCGACCAGGAGGAATTCCTTCCTTAAC 9947163 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || | || || ||| ||| || | || || |||| || || || || || || Sbjct 9947162 CTGGATCTTGGCCTTTACATTTTATATCATATCCGAGGGTTCAACCTCGAGGGTGATGGT 9947103 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || | |||| | || || ||||||||||| Sbjct 9947102 CTTCCCTGTAAGGGTTATCACGAAAATCTGCATTTT 9947067 >seq10 Length=91330067 Score = 95.1 bits (104), Expect = 9e-15 Identities = 150/216 (69%), Gaps = 13/216 (6%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA-AT 29632 || ||| | |||||| || || || ||||||||||| || || ||| || Sbjct 27255417 CAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTC------------AGACAT 27255464 Query 29633 CATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGT 29692 | || | ||| ||||||||| | |||| |||||||||||| || ||||| || || || | Sbjct 27255465 CTTCCAATTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTAT 27255524 Query 29693 CTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752 | || | || || ||| ||||| |||| | |||| || ||||| || || | Sbjct 27255525 CCTGGATATTGGCCTTTACATTTTCTGTTGTGTTCAAGGGTTCAACCTCAAGGGTGATGG 27255584 Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTT 29788 | || || || | |||||| || || |||||||||| Sbjct 27255585 TCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTT 27255620 >seq8 Length=140346614 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| || || || |||||| | || || || | | || || ||| Sbjct 71113619 CAACACAAGATGAAGAGTAGACTCCTTTTGACTATTGTAGTCAGACAAAGTACGTCCATC 71113678 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | |||| ||||| | || | | ||||| || || || || Sbjct 71113679 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTACGGAGCAGAAGGAATTCCTTCCTTCTC 71113738 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || | || || ||| |||||| || || || |||| || || || || || || Sbjct 71113739 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 71113798 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || | |||||| || || ||||||||||| Sbjct 71113799 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 71113834 >seq17 Length=91399201 Score = 87.8 bits (96), Expect = 1e-12 Identities = 148/213 (69%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 29577 CACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATC 29636 ||| | |||||| || || || |||| ||| || || || | | || | | ||| || Sbjct 61604583 CACAAGATGAAGAGTAGACTCCTTTTCAATATTGTAGTCAGACAAAGTCCATGCATCTTC 61604524 Query 29637 GAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTG 29696 | ||| ||||||||| | ||| |||||||||| | || ||||| || || || || || Sbjct 61604523 CACTTGCTTGCCAGCAAAGATCCCTCTTTGCTGAGCAGGAGGAATTCCTTCCTTATCCTG 61604464 Query 29697 TAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 | | || ||| |||||| || || || |||| || ||||| || || || || Sbjct 61604463 GATCTCGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACATCAAGGGTGATGGTCTT 61604404 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || | |||||| | || ||||||||||| Sbjct 61604403 CCC-GTAAGGGTTTTCATGAAAATCTGCATTTT 61604372 >seq7 Length=162899863 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/227 (69%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 29562 TCCCCTCAAACGCA--GCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||| | ||| |||||| || || ||||| ||||| || ||||||||||| | | Sbjct 78358508 TCACCTCAGAGGCAAAGCACCACCTGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAA 78358449 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | ||| || | |||||||| || |||||| ||||| || || || Sbjct 78358448 AGAGTGTGGCCATCCTCCAACTGTTTGCCCACAAATATCAGATGCTGCTGGTCAGGTGGG 78358389 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| ||||| || | || ||||||| |||| |||||| | | || Sbjct 78358388 ATGCCCTCCTTGTCATGGATCTTGGCTTTGACATTTTCACTGGTGTCACTGGGCTGGACC 78358329 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||| || || ||| | || || | ||| || ||| | |||||||| Sbjct 78358328 TCAAAGGTGATGGTTCTTCCTGTGAGGGTCTTTACAGAGATCTGCAT 78358282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384922325285994