Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq13 149 6e-31 >seq13 Length=104990034 Score = 149 bits (164), Expect = 6e-31 Identities = 726/1135 (64%), Gaps = 59/1135 (5%) Strand=Plus/Plus Query 20205 ATGCCTTTTGTGTGATAGATCTTGGAGAAATTGTGCAGAGACATTTTAGATGGCTCAAGG 20264 ||||||| | |||| ||| || ||||| ||| | ||| |||| | || ||| | || | Sbjct 62480055 ATGCCTTCTATGTGGCAGACCTGGGAGACATTCTAAAGAAACATCTGAGGTGGTTAAATG 62480114 Query 20265 CTTTGCCTAAAGTCATTCCATTTTACGCCGTTAAGGCCCA-GAACGACGAGAGAGTCCTC 20323 || | || |||| || ||||| || || || | || | || | || | Sbjct 62480115 CTCTCTCTCGTGTCACCCCCTTTTATGCAGTCAAATGTAATGATAGCAAAGCCA-TCATG 62480173 Query 20324 AAGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCAGGAGATTCAGTTA 20383 |||||||| ||||| | || || ||||||||||| || ||| || || ||||| Sbjct 62480174 AAGACCCTTGCTGCTGTGGGGACAGGATTTGACTGTGCTAGCAAGACTGAAATACAGTTG 62480233 Query 20384 CTGCAAAATCTGGGAGTTCACGCAGACAGGATACTTTTTGCGAATCCTTGTAAGCAGCCT 20443 |||| | |||| | || | |||| ||||| | | ||| ||||||||||| || Sbjct 62480234 GTGCAGAGTCTGAGGGTGCCTCCAGAGAGGATTATCTATGCAAATCCTTGTAAACAAGTA 62480293 Query 20444 TCGCATATAACGTATGCCGCTCAAACTGGAGTAAGGCTGATGACTTTTGATAGTGAAGAA 20503 || || | | |||||| ||| | | |||||| | ||||||||||||||||||||| Sbjct 62480294 TCTCAAACTAAGTATGCTGCTAATAATGGAGTCCAGATGATGACTTTTGATAGTGAAGTT 62480353 Query 20504 GAGCTTACCAAAATTGATCGCCTGCACCATGATGCTAAGCTGGTACTGAGGATTAAAGTG 20563 ||| | | ||| ||| | || | | || ||| |||| || ||||| Sbjct 62480354 GAGTTGATGAAAGTTGCCAGAGCACATCCAAAAGCAAAGTTGGTTTTGCGGATTGCCACT 62480413 Query 20564 GATGACTCTAACTCAGACAGCATACTGAGTGTCAAGTTTGGGGCTCCTATTGAAGCCAGC 20623 ||||| || || ||| | | || ||||| || || || || | | | ||| Sbjct 62480414 GATGATTCCAAAGCAGTCTGTCGTCTCAGTGTTAAATTCGGTGCCACGCTCAGAAATAGC 62480473 Query 20624 CAACGCCTGCTAAAACAGGCCAAAAAATTAGGCCTAGAAGTGATCGGAGTCAGCTTCCAC 20683 | ||| | || ||| ||| | | | || || | || |||||||||||| Sbjct 62480474 AGGCTCCTTTTGGAAAGGGCAAAAGAGGTGAATATCGATGTTGTTGGTGTCAGCTTCCAC 62480533 Query 20684 GTGGGCAGTGGCTGCAAAGATGCACAGGCTTACAGAAAAGCCATAGCTGAGGCCAGGAGA 20743 || || || ||||| | ||| | || | | | | || || |||| || | | Sbjct 62480534 GTAGGAAGCGGCTGTACCGATCCTGAGACCTTCGTGCAGGCAATCTCTGATACCCGCTGT 62480593 Query 20744 GCTTTTGACTTTGGCACGCTGA--TGGGCTTTGACATGTACCTCTTGGATATTGGTGGCG 20801 | ||||||| | || ||||| | || || |||||| || | |||||||| || | Sbjct 62480594 GTTTTTGACATGGG--GGCTGAGGTTGGTTTCAGCATGTATCTGCTTGATATTGGCGGTG 62480651 Query 20802 GCTTTCCCGGGATCAATGAGATTG---AGCCAACTTTTGAGGACAT-TGCAGAAGTCATT 20857 ||||| || ||||| |||| || ||| | ||||| || || ||| | | || Sbjct 62480652 GCTTT-CCTGGATC--TGAGGATGTGAAGCTTAAATTTGAAGAGATCACCAGCA-TAATC 62480707 Query 20858 AACGCGGCCTTGGAAAGGCATTTTC---CAGATGATGCCAACCTGACAATTATTGGTGAA 20914 ||| | || ||||| || |||||| |||| || ||| ||| || | | | Sbjct 62480708 AACCCAGCGTTGGACAGATATTTTCTGTCAGACTCTG---GAGTGAGAATCATAGCTAAG 62480764 Query 20915 CCTGGCAGGTACTACGCTACCTCGGCGCTAACTATAGCTGTAACTGTGATTGCTA--AAA 20972 |||||||| ||||| | | | || || | || | || || | | | || | | ||| Sbjct 62480765 CCTGGCAGATACTATGTTGCATCAGCTTTCACACTTGCAGTTAATATCATCTCCAAGAAA 62480824 Query 20973 AGTGTGTTGAAG--ACA------CTC-----CTGGAGA---------TAAAAAG---TTT 21007 | ||| || ||| ||| ||| || ||| | || || ||| Sbjct 62480825 ATTGTATTAAAGGAACAGACTGGCTCTGATGATGAAGATGAGTCGAGTGAACAGACCTTT 62480884 Query 21008 ATGTATTATGTTAATGATGGCGTCTATGGCAGTTTTAACTGCATATTATTTAACCATGCT 21067 ||||||||||| ||| |||| |||||||| ||||| |||||| | | | | ||||| Sbjct 62480885 ATGTATTATGTGAATTATGGTGTCTATGGATCATTTAATTGCATACTGTATGATCATGCA 62480944 Query 21068 CGTCCTATGCCTATGCTGCTTAAAGAAAAACGCCTTGA--AGACA--AAG-ACTATGTTT 21122 | | | ||| | |||| ||||| | ||| | ||| | ||| | ||| | Sbjct 62480945 CATGTAAAGCCCCTTCTGC-AAAAGAGA----CCTAAACCAGATAAGAAGTATTATTCAT 62480999 Query 21123 CTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGC 21182 | ||||| ||||| || | || |||||| | ||| | |||||| |||| | ||| |||| Sbjct 62481000 CCAGCATATGGGGACCAATATGTGATGGCCTTGATCGGATTGTTGAGCGCTATGACCTGC 62481059 Query 21183 CAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCA 21242 | || | || ||||| || ||| | | |||||||||||||||||||||| || | Sbjct 62481060 CCGAAATGCATGTGGGTGATTGGATGCTCTTTGAAAACATGGGCGCTTACA-CTGTTGCT 62481118 Query 21243 GCT-CTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTCAG 21296 ||| | || || || || ||||||| | ||||| | ||||||| || |||| Sbjct 62481119 GCTGCCTCTACGTTCAATGGCTTCCAGAGGCCAGTGATCTACTATGTGATGTCAG 62481173 Score = 89.7 bits (98), Expect = 5e-13 Identities = 129/177 (73%), Gaps = 4/177 (2%) Strand=Plus/Minus Query 21122 TCTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTG 21181 || ||||| ||||| || | || |||||| | ||| | |||||| |||| ||||| ||| Sbjct 9777985 TCCAGCATATGGGGACCAACATGTGATGGCCTTGATCGGATTGTTGAGCGCTGTGACCTG 9777926 Query 21182 CCAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTC 21241 || || | || ||||| || ||| | | |||||||||||||| ||||||| || | Sbjct 9777925 CCCGAAATGCATGTGGGTGATTGGATGCTCTTTGAAAACATGGGTGCTTACA-CTGTTGC 9777867 Query 21242 AGCT-CTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGC-ACTATGTTATTTCAG 21296 ||| | || || || || ||||| ||| || | || | | ||||||| || |||| Sbjct 9777866 TGCTGCCTCTACGTTCAATGGCTT-CCAGAGGCCGACGATCTACTATGTGATGTCAG 9777811 Score = 82.4 bits (90), Expect = 7e-11 Identities = 96/130 (74%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 20372 GAGATTCAGTTACTGCAAAATCTGGGAGTTCACGCAGACAGGATACTTTTTGCGAATCCT 20431 || || ||||| |||| | |||||| || | |||| ||||| | | ||| |||||| Sbjct 9780553 GAAATACAGTTGGTGCAGAGTCTGGGGGTGCCTCCAGAGAGGATTATCTATGCAAATCCT 9780494 Query 20432 TGTAAGCAGCCTTCGCATATAACGTATGCCGCTCAAACTGGAGTAAGGCTGATGACTTTT 20491 ||||| || || || || | |||||| ||| | | |||||| | ||||||||||| Sbjct 9780493 TGTAAACAAGTATCTCAAATTAAGTATGCTGCTAATAATGGAGTCCAGATGATGACTTTT 9780434 Query 20492 GATAGTGAAG 20501 |||||||||| Sbjct 9780433 GATAGTGAAG 9780424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463179201969120