Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq15 215 6e-51 seq2 194 2e-44 seq4 145 9e-30 SEQ27355 141 1e-28 seq6 84.2 3e-11 >seq15 Length=108049171 Score = 215 bits (238), Expect = 6e-51 Identities = 605/921 (66%), Gaps = 11/921 (1%) Strand=Plus/Minus Query 162067 TTATGTCGGAGATACTCGTCTAGACACTGGACCGCGAACACGTCTCGTTCCTCATCGAAC 162126 ||||| | | || ||| || | |||||||| || || | ||| ||| | || ||| Sbjct 83733842 TTATGCCTCAAATGCTCATCCAAACACTGGATGGCAAAGAGGTCAACATCCACGTCAAAC 83733783 Query 162127 TTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCGATCCGAAC 162186 || || || |||| ||| || || || ||||| || | || || | ||| || Sbjct 83733782 TTATTGGCAAACAAGTGGTGT---TTGCGCAGCATCCAGTTCAAGTCACCAGCTCCAAAA 83733726 Query 162187 ACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCCCATCGTCCACA 162246 | |||||| || ||||||||||| || ||| || || || |||| || | | ||| Sbjct 83733725 ATGCACACCGAGCGCACGTGCACTCCATCGCAGGGAGGGTAGGGGGCACCCTTGGAAACA 83733666 Query 162247 TCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGGAGGTGTCG 162306 || ||||| ||||||||||||| || ||||| | | || |||||||| || ||| Sbjct 83733665 TCACCCTCAAAGTATTGCCACTTGACAAACCTGGCAACTGCTTGCATGTCAGACAAATCG 83733606 Query 162307 TACTTGTACACTGACGGCACG-GCTCCAGGAACACCCGGCAGTCTCTGTAGAGTAGCCCA 162365 ||||| | ||| | | | | | || || || | || | ||||| | || ||||| Sbjct 83733605 TACTTATGG-CTGGCAGAAAGTGAGCCCGGGACTTCAGGAATCCTCTGGATGGTGGCCCA 83733547 Query 162366 CAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTGACCGTTTT 162425 || | || || || || || || || | || ||||||||| |||| || ||| Sbjct 83733546 GAGATACTCATCAGGGCTGTATGTGTCTTGCGCCCACTCCATAAACTTTTGGATGTTTTC 83733487 Query 162426 ATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGCTACCAGAAAA 162485 || | ||| | || || || ||| | || | |||||| || || |||||||| Sbjct 83733486 ATTCTGTAGTACATACCCCACATACTCCCTACTGACCACAAAGTAGGCACTGCCAGAAAA 83733427 Query 162486 CACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTTGACTACCATTCCCTC 162545 | ||| | | ||||| || |||| | || ||||| | | |||| | Sbjct 83733426 AAGAGGTGTTTCGAGCGGAGGAAGCATTTTGACAGTCCCTGTGTTTGTCAGCTTTCCATT 83733367 Query 162546 TACGACCACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTA-GACGGGTGTTCGGTCT 162604 || ||| | | | ||| ||||||| | |||| ||| | | | || || | Sbjct 83733366 AACAACCTCATACCGCTTTTTCCACCTTTCT-TCTTTATGGGATGGCATCCTCTCCGTTT 83733308 Query 162605 CTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTAGATTGGTCTTAA 162664 | || ||||| ||| || ||| |||| | || || ||||| ||||| |||| Sbjct 83733307 CCAGGCTGTTTTCTCCCATTAACAACTTGAGCTTCCTGACAATTTCTAGGTTGGTTTTAA 83733248 Query 162665 GGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACGCTGAGTCCGTACA 162724 ||||| || | || || ||||| || | || ||||| || | || | | | || | Sbjct 83733247 TAGGAAAATCCATACCACAAAGATTTATCAAGTACTTCCAGTTTGCACTCATTGCATAGA 83733188 Query 162725 GATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTACACGACGCTCT 162784 | |||| | ||||| || || ||||| || |||||||| || || || || || |||| Sbjct 83733187 GGTCCTTCATGCAGTTGAGGTCAGCCTGAACCCGACTCCATGATGCATAAACCACACTCT 83733128 Query 162785 CCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCATCACGGCCAGTG 162844 |||| | |||| ||||||||||| |||||| ||| | || |||||||| || | Sbjct 83733127 CCAATCGGCTGGCCACAAAGACATTACTGAAACAGGAAGCGATGCCCATCACTGCAGCTA 83733068 Query 162845 AGAA--CATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTCTGAGGGGCGTA 162902 | | ||| || | ||| | || || || | ||| || | |||||| || || Sbjct 83733067 AATAGGAATC--CTCGGATTTTGTGTCCACATGAATGCAATAGAAATTCTGGGGCATATA 83733010 Query 162903 GATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACGATAGAATACGC 162962 |||||||||||| | || || | ||| || ||||| || || ||||| |||||||| || Sbjct 83733009 GATGGCCCTCAGCAGCCTGTCAAGCATTTCAATCTTGTGATGAACCACTATAGAATATGC 83732950 Query 162963 TATGGGGAACTCAGCCTCCTC 162983 ||| || ||||| ||||| || Sbjct 83732949 TATTGGAAACTCTGCCTCTTC 83732929 >seq2 Length=188283584 Score = 194 bits (214), Expect = 2e-44 Identities = 238/325 (73%), Gaps = 0/325 (0%) Strand=Plus/Minus Query 171771 CATAGAGTGTCAGACAGGTCTTACCCGATATTTTTCCGGACCCAAAAGTATTAAACAAAC 171830 |||||| || || |||| | || || || || || || ||||| ||||| || | || Sbjct 32106513 CATAGACAGTGAGGCAGGCTGTTCCTGAGATCTTCCCAGAACCAAAGGTATTGAAGAGAC 32106454 Query 171831 ACATAAAACAGCCTTCGTCCTCCACGGTGGTGTTCCAAAAAGTCAATGTAGAATTTCTGA 171890 |||| |||| ||||| ||||||| |||| | ||||| || || | || | ||| || Sbjct 32106453 ACATGTAACACCCTTCATCCTCCAGGGTGATATTCCAGAAGGTGATGGTTGTGTTTTGGA 32106394 Query 171891 GTCCGAGTTGCGTAATGTTCACCCGGTCCTTGTACGGAGGCTGGACGACAACACCGTGAT 171950 |||| || || |||||||| | | |||||| || | |||||||| || || || || | Sbjct 32106393 GTCCCAGCTGGGTAATGTTTATCTTGTCCTTATAGGCAGGCTGGATCACCACCCCATGGT 32106334 Query 171951 TCTCGCTGAACGTGGCCATGTTTTCGGGGCTCGTAGCCTTTATCTTCTGCCACGTTACTA 172010 |||||||||| ||| |||||||||| ||||| ||| || | |||||||| || || | Sbjct 32106333 TCTCGCTGAAGGTGACCATGTTTTCTGGGCTTACAGCTTTCTTTTTCTGCCATGTCACAA 32106274 Query 172011 TTAAAACTTCTTTGTCGGTTTGAAGAGAGCATCTTAAAGAAGCAGGTGTGTTCAATAATT 172070 | | ||||| | | | |||| |||||||||||||| |||||||| |||| || | Sbjct 32106273 TCAGGACTTCCTGGGCATTTTGCAGAGAGCATCTTAAGGAAGCAGGAGTGTACAGCTGCT 32106214 Query 172071 CCCTTTCGTCTTGCGTTACCACCTG 172095 | ||||| || || || ||||| || Sbjct 32106213 CTCTTTCATCCTGGGTCACCACTTG 32106189 Score = 114 bits (126), Expect = 1e-20 Identities = 160/221 (72%), Gaps = 5/221 (2%) Strand=Plus/Minus Query 171506 GTTTGTCTGATGTCTGTTACAGTCCCCAAGTGTAAGACTTTGCATATCACCTCCTCGTTT 171565 ||||| | | ||| || |||||||||| ||| | || | ||| |||||||||| | Sbjct 32109053 GTTTGCTTAAAGTCAGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCT---TC 32108997 Query 171566 CCCACTTGACTTTTAGGATCTTTTACTTGAAGAATGCTAGTAACAGATGTAGTCCCGTTA 171625 ||||| ||| | ||||| ||||| || || || ||||| |||||||| || ||||| || Sbjct 32108996 CCCACCTGATTCTTAGGGTCTTTGACCTGGAGGATGCTGGTAACAGACGTGGTCCCATTT 32108937 Query 171626 CGATGTAGAACG-GTTTTAGTACTATTTTCTATTCCGGATCCGGCAACTTTCCAAAATAT 171684 | || ||| | || ||||||||||| | || || | | || ||||| || || Sbjct 32108936 GGGTG-AGACAGAGTCACTGTACTATTTTCAAACCCTGACCGAGGGACCTTCCAGAAGAT 32108878 Query 171685 AACAGGAGCTGGTCTAGCAGTAGCAGAGCAAGTTATGTTTA 171725 | || ||||| | ||||| ||||||||||| ||||||| Sbjct 32108877 CATGGGGGCTGGGCGGGCAGTGGCAGAGCAAGTGATGTTTA 32108837 >seq4 Length=166074386 Score = 145 bits (160), Expect = 9e-30 Identities = 437/663 (66%), Gaps = 15/663 (2%) Strand=Plus/Minus Query 176887 TCCAGTTAAAGTATTGAAGATAAAGGGTGACGTTTTTATCGATGGCGTTGAGGTGCGAGG 176946 ||||||||||||| ||| || | | |||||| |||| | || || | | | Sbjct 91980435 TCCAGTTAAAGTAACTAAGGTATAACTTATTGTTTTTGTCGACTTCCTTCAGATACTTTG 91980376 Query 176947 CCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAAT 177006 | || || | || || | || || | ||| |||||||| | ||| | || | ||||| Sbjct 91980375 CTAGCTCACTGGGAGAGTTATAATCTTCCACATGAATGAATGAATCTGCTGGAATGTAAT 91980316 Query 177007 TTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGATC 177066 | || || || ||||| |||| ||| || || | ||||| | || |||| || || Sbjct 91980315 TCTCATAGTTTTCTCTAGATGGTCCCAGAACAACAGGTACAGAGCCAGCCAGAAAAGCAT 91980256 Query 177067 GGTAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAGAATT 177126 |||||| ||||| || || || ||| |||| | || || ||||| | ||||| |||| Sbjct 91980255 TGTAGAGCTTTTCCGTGATGTAATCCTTGTGGATTGAATTTTCAAAGGAAAGATAAAATT 91980196 Query 177127 TACAGGAAGATA--GTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTACTACGTT 177184 |||| | ||||| ||| || || || | | ||| | ||| ||||| | | | | Sbjct 91980195 TACAAGTAGATATGGTA--GGAATCAAATTTTTATCATTGACATATTCTCCAAATGCTTG 91980138 Query 177185 CCCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGA-TCTCACGT 177243 ||| || ||| || || ||| ||| || ||||| ||| || || || || | | Sbjct 91980137 CCCATAGGTATGGATTTCAATGCTTTTGCTTAGCTCATTGTAATA-CTTGACCCTGGCAT 91980079 Query 177244 GGTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTTTGC-GGGAACGGGA 177302 | || |||||| || || || |||||||| || ||||| |||||||| || || Sbjct 91980078 GCTCAGGGTTCCAGTTACTCACAACCCAGCACACCAACTT-CTCTTTGCTTGGCAC---- 91980024 Query 177303 TTC-GATACTAATGCAGTGTCTCTGAGCGTTAGTGATCCATAGGGCACGTGAATATCCGA 177361 ||| | || || | | | || | ||| | | ||||| ||||| || ||||| || Sbjct 91980023 TTCAAACACAAAGGGATTTGTGCTCACCGTCAAGAAGCCATAAGGCACTTGGATATCTGA 91979964 Query 177362 GTCGCGTCTGTACGTTAACGTGAGATTGAAAAGGTTTTCTATACC-TTGTTTGAAGGGGC 177420 ||| || | || || || || || || || | || || || || | ||| ||| | Sbjct 91979963 GTCACGGCGATAAGTCAAAGTCAGGTTAAACAAGTGCTCAATGCCACTCTTTTGAGGAG- 91979905 Query 177421 TGTTACTGGGCGATTCTAAGTTCATCCATATCCACTTTTGAAAGGTTGGTCTGGGTTCCG 177480 ||| | | || || || || |||||||| ||||| || || |||| ||| || | || | Sbjct 91979904 TGTGAGTTGGTGACTCCAAATTCATCCAAATCCATTTCTGGAAGGGTGGCCTAGCTTGCT 91979845 Query 177481 TAGGTAGAGTATAAGGATCTATACTTATCTCTCTGTGGTGAAAGACTACGGCATTGGCTT 177540 ||||| | | |||| ||| || |||| ||| || | | || |||| || || Sbjct 91979844 GAGGTAAATTTGTCAGATCCCAACTGATGTCTCGGTGATGGATCAGAACTGCATGGGATT 91979785 Query 177541 TGT 177543 ||| Sbjct 91979784 TGT 91979782 >SEQ27355 Length=1036 Score = 141 bits (156), Expect = 1e-28 Identities = 229/326 (70%), Gaps = 5/326 (2%) Strand=Plus/Minus Query 162661 TTAAGGGGAAAGTCGGTGCCGCAGA-GATTAATAACATATTTCCACTTAACGCTGAGTCC 162719 |||| ||||| || | || || | |||| || | || ||||| || | || | | | Sbjct 1036 TTAATAGGAAAATCCATACCACAAAAGATTTATCAAGTACTTCCAGTTTGCACTCATTGC 977 Query 162720 GTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTACACGAC 162779 || || |||| | ||||| || || ||||| || |||||||| || || || || || Sbjct 976 ATAGAGGTCCTTCATGCAGTTGAGGTCAGCCTGAACCCGACTCCATGATGCATAAACCAC 917 Query 162780 GCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCATCACGGC 162839 |||||||| | |||| ||||||||||| |||||| ||| | || |||||||| || Sbjct 916 ACTCTCCAATCGGCTGGCCACAAAGACATTACTGAAACAGGAAGCGATGCCCATCACTGC 857 Query 162840 CAGTGAGAA--CATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTCTGAGGG 162897 | | | ||| || | ||| | || || || | ||| || | ||||||||| Sbjct 856 AGCTAAATAGGAATC--CTCGGATTTTGTGTCCACATGAATGCAATAGAAATTCTGAGGC 799 Query 162898 GCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACGATAGAA 162957 |||||||||||||| | || || | ||| || ||||| || || ||||| |||||| Sbjct 798 ATATAGATGGCCCTCAGCAGCCTGTCAAGCATTTCAATCTTGTGATGAACCACTATAGAA 739 Query 162958 TACGCTATGGGGAACTCAGCCTCCTC 162983 || ||||| || ||||| ||||| || Sbjct 738 TATGCTATTGGAAACTCTGCCTCTTC 713 >seq6 Length=175400206 Score = 84.2 bits (92), Expect = 3e-11 Identities = 168/247 (68%), Gaps = 4/247 (2%) Strand=Plus/Plus Query 162736 CAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTACACGACGCTCTCCAACCTAGTG 162795 ||||| || || ||||| || | ||||| || || || || | ||||||| | | Sbjct 22548404 CAGTTGAGGTCAGCCTGAACCTGGCTCCATGATGCATAAACCATCGTCTCCAATCAGCTC 22548463 Query 162796 GCGACAAAGACATTGTCGAAACACGAAACTATCCCCATCACGGCCAGTGAGAAC--ATCG 162853 || |||||||| || |||||| | | || |||||||| || | | || ||| Sbjct 22548464 GCCACAAAGACTTTACTGAAACAGAATGCAATGCCCATCACTGCAGCTAAAAAGGAATCT 22548523 Query 162854 GGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTCTGAGGGGCGTAGATGGCCCTCA 162913 || | ||| | || ||||| | || || | ||||||||| ||||||||||||| Sbjct 22548524 --TCTGATTTTTTGTCCACGTGAATGCGATAGAAATTCTGAGGCATATAGATGGCCCTCA 22548581 Query 162914 GTAATCTCTCGAACATCTCTATCTTATGGTGTACCACGATAGAATACGCTATGGGGAACT 162973 ||| || | | ||| || ||||| || || || | |||||||| ||| | | |||| Sbjct 22548582 GTAGCCTGTAAAGCATTTCAATCTTGTGATGAACTGCTATAGAATATGCTGTTTGAAACT 22548641 Query 162974 CAGCCTC 162980 | ||||| Sbjct 22548642 CCGCCTC 22548648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577974792886400