Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq5 129 4e-25 seq11 107 1e-18 seq7 87.8 1e-12 seq16 86.0 4e-12 seq3 84.2 1e-11 >seq5 Length=183742232 Score = 129 bits (142), Expect = 4e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| || || ||||||| || || ||| |||||| || |||||||| || ||| Sbjct 52769885 CCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAG 52769944 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| ||||| |||||||| |||| ||||||||| || | || Sbjct 52769945 AGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGG 52770004 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||| || ||||| |||||| ||| | | | ||| |||||| || | || || Sbjct 52770005 ATACCCTCCTTGTCTTGAATTTTGGCTTTGA-CGTTCTCAATGGTGTCACTGGGCTCGAC 52770063 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| ||||| || || | || || |||||||||||||| Sbjct 52770064 CTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 52770111 >seq11 Length=132960392 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| | ||| | ||||| || || ||| |||||| || |||||||| || || Sbjct 124902027 CCACCTCTGAGACGGAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 124902086 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| ||||| || ||||| ||||| | |||||| || | || Sbjct 124902087 AGGGTGCGCCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGG 124902146 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || | |||| ||| ||||||||| | ||||| Sbjct 124902147 ATGCCTTCCTTGTCCTGGATCTT-TGCCTTGACATTCTCAATGGTGTCGCTGGGCTCCAC 124902205 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || | || || || ||||||||||| Sbjct 124902206 CTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 124902253 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| | ||| | ||||| || || || |||||| || |||||||| || || Sbjct 124901799 CCACCTCTGAGACGGAGCACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAGTCAGAC 124901858 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || ||||||||||| ||||| | |||||| || | || Sbjct 124901859 AGGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCGGGAGGA 124901918 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || || || | || | |||||| || | || || Sbjct 124901919 ATGCCTTCCTTGTCTTGGATCTT-TGCTTTGACGTTCTCGATGGTGTCACTGGGCTCGAC 124901977 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || | || || || ||||||||||| Sbjct 124901978 CTCGAGGGTGATAGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 124902025 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| | ||| | ||||| || | ||| |||||| || |||||||| || || Sbjct 124902483 CCACCTCTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 124902542 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || |||||| | || |||| || ||||||||||| ||||| | |||||| || | || Sbjct 124902543 AGGGTGCGTCCATCTTCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCGGGAGGA 124902602 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| || || || || || || || | || | |||||| || | || || Sbjct 124902603 ATGCCTTCCTTATCTTGGATCTT-TGCTTTGACGTTCTCGATGGTGTCACTGGGCTCGAC 124902661 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || | || || || ||||||||||| Sbjct 124902662 CTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 124902709 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 |||| || ||||| || | ||||| || |||||| |||||| || |||||||| || | Sbjct 124901569 CACCCCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAG 124901628 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | || ||||| | || |||| || ||||||||||| |||| | |||||| || | | Sbjct 124901629 ACAGGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGAG 124901688 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||||| ||||| || || || | |||| || | ||||| || | || Sbjct 124901689 GGATGCCTTCCTTGTCCTGGATCTT-TGCCTTGACATTTTCAATAGTGTCACTGGGCTCG 124901747 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| || || || || | || || || ||||||||||| Sbjct 124901748 ACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 124901797 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| | ||| | ||||| || || || |||||| || |||||||| || || Sbjct 124902255 CCACCTCTGAGACGGAGCACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAGTCAGAC 124902314 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| ||||| || ||||| ||||| | |||||| || | || Sbjct 124902315 AGGGTGCGCCCATCTTCCAGCTGTTTCCCAGCAAATATCAACCTCTGCTGGTCAGGAGGG 124902374 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || | |||| ||| |||||| || | || || Sbjct 124902375 ATGCCTTCCTTGTCCTGGATCTT-TGCCTTGACATTCTCAATGGTGTCACTGGGCTCGAC 124902433 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || | || || || ||||||||||| Sbjct 124902434 CTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 124902481 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| || || | ||||| || || ||| |||||| || ||||| || || ||| Sbjct 115437931 CCACCTCACAGGCGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTCTAGTCTGAG 115437990 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || |||| | || ||| ||||| || ||||| |||| || |||||| || || | Sbjct 115437991 AGACTGCGGCCATCCTCCGGCTGTTTGCCCGCAAATATCAGACACTGCTGGTCAGGCAGG 115438050 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | || | ||||| |||| | | || |||| ||| |||||| || | ||||| Sbjct 115438051 ATGCCCTACTTGTCTTGGATTT-CGGCTTTGACATTCTCAGTGGTGTCCCTGGGCTCCAC 115438109 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || || || | | || || |||||||||||||| Sbjct 115438110 CTCAAGGGTGATGGTCTTGCCCATGAGGGTGTTCACAAAGATCTGCAT 115438157 Score = 89.7 bits (98), Expect = 3e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| | || | ||| | || || ||| |||||| || |||||||| || || Sbjct 124902711 CCACCTCTGAGGCGGAGCACGAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 124902770 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || ||||||||||| |||| | |||||| || | || Sbjct 124902771 AGGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGA 124902830 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| || || || || || | |||| || | |||||| || | || || Sbjct 124902831 ATGCCTTCCTTATCTTGGATCTT-TGCCTTGACATTCTCGATGGTGTCACTGGGCTCAAC 124902889 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752 |||| ||||| || || || || | || || || ||||||||||| || Sbjct 124902890 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATTGT 124902940 >seq7 Length=162899863 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/229 (69%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| || | | ||||| | ||| ||| |||||| || |||||||| | ||| Sbjct 115127195 CCACCTCGCAGGCACAGCACCAGGTTTAGGGTGGACTCTTTCTGGATGTTGTAGCCTGAG 115127136 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| ||||| || |||| |||| ||||||||| || | || Sbjct 115127135 AGAGTGCGGCCATCCTCCAGCTGTTTCCCAGCAAGTATCAGACGCTGCTGGTCAGGTGGG 115127076 Query 33643 ACACCT-TCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700 | ||| || ||||| |||||| ||| | ||| | | |||||| || | || | Sbjct 115127075 ATACCCCTCCTTGTCTTGAATTTTGGCTTTGA-CATTCTAAATGGTGTCACTGGGCTCGA 115127017 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || || || | | || || |||||||||||||| Sbjct 115127016 TCTCAAGGGTGATGGTCTTGCCCATGAGGGTCTTCACAAAGATCTGCAT 115126968 >seq16 Length=74961506 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| |||| || | |||| || || || ||| || || |||||||| || ||| Sbjct 15839725 CCACCCCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAG 15839784 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || || ||||| || | | |||||| || | || Sbjct 15839785 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 15839844 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||||| || || || |||| ||| || | |||||| || | ||||| Sbjct 15839845 ATGCCTTCTTTATCTTGGATCTTGGCCTTCA-CATTTTCGATGGTGTCACTGGGCTCCAC 15839903 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| ||||| || || || || | || || ||||||||||||||| Sbjct 15839904 CTCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATA 15839952 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||||| ||| | |||| || || || ||| || || |||||||| || || Sbjct 15839952 ACCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGA 15840011 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || |||| || || || ||||| || | | |||||| || | || Sbjct 15840012 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGG 15840071 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||| || || || ||| |||| || | |||||| || | |||| Sbjct 15840072 GATGCCTTCTTTATCCTGGATCTTGGCCTTC-ACATTTTCGATGGTGTCACTGGGCTCCA 15840130 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || || || | || || || |||||||||||| Sbjct 15840131 CTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATA 15840180 >seq3 Length=181338541 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 |||||| || |||||| | || ||||| ||||| | || |||| ||||| || ||||| Sbjct 85701793 CTCTTTCTGGATGTTGCAGTCTGAGAGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAA 85701734 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 |||| ||||||||| || | || | || || ||| | |||||| || | ||| Sbjct 85701733 TATCAGACGCTGCTGGTCAAGTGGGATGCCCTCCTTGGCTTGAATTTTGGCCTTGA-CAT 85701675 Query 33678 AGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| |||||| || | || || || | ||||| || || |||| | || || | Sbjct 85701674 TCTCAGTGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCTGCGAGGGTCTTCA 85701615 Query 33737 CAAAGATCTGCAT 33749 ||||||||||||| Sbjct 85701614 CAAAGATCTGCAT 85701602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328450679537280