Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq21 284 2e-71 seq13 125 1e-23 seq12 120 4e-22 seq8 120 4e-22 seq14 114 2e-20 SEQ44210 105 9e-18 seq9 96.9 5e-15 seq19 89.7 7e-13 >seq21 Length=143691637 Score = 284 bits (314), Expect = 2e-71 Identities = 625/934 (67%), Gaps = 16/934 (2%) Strand=Plus/Plus Query 39270 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGT---GACATAACTCCCATTT 39326 |||| |||||| |||| || | |||| ||| ||| | | |||| |||||||| Sbjct 41472621 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGATTCGACACCACTCCCATCC 41472680 Query 39327 TTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 39386 | || || || || | ||||| || || || || ||| || ||| ||||| | Sbjct 41472681 TCTGATACTCCTTTACTCTCTTCTCAAAGAAGTTCGT-----CTTTCAGTGAAATATTCT 41472735 Query 39387 CCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCA 39446 |||| || ||||| || || | | | | || |||| || | ||| | || Sbjct 41472736 CCATAAAGTCAAATGGGTTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCGGCATG- 41472794 Query 39447 ATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 39506 ||| ||||| ||| | || |||||| ||||| | |||||||| || ||||| | Sbjct 41472795 -TCTGTCTGCCACAGACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 41472853 Query 39507 TAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATCG 39566 | || || | ||||| || || || || | ||| || || || | | ||| | Sbjct 41472854 TCACAGGCAAGGCCTCAGTGAGGAATTCCTGTTCTATCCAAACAGCATTGATAATTCTTT 41472913 Query 39567 ATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAGT 39626 | ||| | ||| || ||| || | | || || ||||| | |||||| || | Sbjct 41472914 CTCTTATTCTCTCCTCCAATGGTTTGTGTACCAGGTGATTGAACATCAGGCAGGCAAAAT 41472973 Query 39627 CACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTA 39686 |||| |||| |||||||||| |||||| | ||| || ||||| ||||| |||||||| | Sbjct 41472974 CACAGTGTAAACCCTCATCTCCACTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCATCA 41473033 Query 39687 GACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTA 39746 | || || || |||||||| ||||| | |||||| | |||||||||| ||||||| Sbjct 41473034 GTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAAGA---TGCCTTCCG 41473090 Query 39747 CTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT---GTATCCACTTCT 39803 |||| ||||| | |||| | || || || | | | || | ||||| | | Sbjct 41473091 CTGCAGCAAAGACTACAACACGTTCCCCATAGGTAGCTGCTTTGTCCCCAATCCAGTGCA 41473150 Query 39804 GTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAAT 39863 |||||||| || |||||||| ||||||||||| ||||| || ||||| ||| || | | Sbjct 41473151 AGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGCGAAATT 41473210 Query 39864 GTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGA 39923 |||| | |||||| | || || || || | | |||||||||| | ||||| | Sbjct 41473211 CCCTTTCTTTGGGATCTTTTATGTAAGTGTCAATAAGGAAACTATACATTCCAGAATGTA 41473270 Query 39924 TGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTG 39983 ||||||| || || || || || || | ||||| | ||||| || | || || ||| Sbjct 41473271 TGTTTTCCATGGCAATTTGGAAGCCACAGAAACAGCGGGCTTCTGTCACCTGAACTTCTT 41473330 Query 39984 AACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCA 40043 | ||||| ||| |||| ||| |||| ||||| |||||||| || |||| || ||| Sbjct 41473331 GGCTAAATCACTCCACCAAGTTTGCATTTACTATGCCATCACTTGCTACAAAGAAAACCA 41473390 Query 40044 ATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTT 40103 ||||| ||||||| | | || ||||| ||| | ||||| || || | Sbjct 41473391 GAACATGGGATATAAAATCTCTCTCCTCGGGCTTCAGGGATTCCCAGTGCCAAATGTCCT 41473450 Query 40104 TTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCC 40163 | || | || || || || || ||||| || || || || ||||| || ||||| | || Sbjct 41473451 TGGACAGGTCCACCTCCTCCGCGGTCCAGAAGGAAGCTTCCGCCTTCTTATACATCTGCC 41473510 Query 40164 ATATATCACGATATTGTATTGGAAAAATAACAAA 40197 | |||||| | || | | || || || ||||| Sbjct 41473511 AGATATCATGGTACTCGGTGGGGAAGATGACAAA 41473544 Score = 217 bits (240), Expect = 2e-51 Identities = 334/466 (72%), Gaps = 14/466 (3%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||| || |||| ||| |||| |||||||| || ||||| | ||| || ||||||||||| Sbjct 132680220 GCAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAG 132680161 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 |||||||| || || | || ||||||| ||||| |||||||| ||||||||||| Sbjct 132680160 GCCAGGCATCAGTCCTTGTTTCCTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGAA 132680101 Query 39736 GATGCCTTCTACTGCTGCAAA---TGCAACAAG-TCTCTCTCCGTAACTTGTATCATTAT 39791 | ||| ||| ||| ||||| ||||||| | |||| | ||||| | | | || Sbjct 132680100 GGTGCTTTCCACTAGGGCAAAGGCTGCAACACGTTCTCCATGGGTAACATCT-TTGTTCC 132680042 Query 39792 GTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCAT 39851 ||||| | ||||| | || |||||||| |||| |||||||||| | || |||| Sbjct 132680041 CAATCCAACACAAGACCCAAACTGCCTTCTTCTTGACAC-AGGCATTGTTCCAATGGCAT 132679983 Query 39852 TAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911 | |||||| | | |||| | |||||||| || ||| || || | ||||||| | Sbjct 132679982 TGAAGAGAAATTCCCTTTCTTTGTTATCTTTA--ATGTGTGTCAATAAGGAGACTATTTA 132679925 Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971 | || ||||| |||||||| | || || || || || || || || | ||| |||| Sbjct 132679924 TGTCAGAATGTATGTTTTCTGTAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTCTGTAA 132679865 Query 39972 TTTGTACCTC-TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCG 40030 | || | || ||||| |||| |||| |||| ||||||| ||||| ||||||| || Sbjct 132679864 TCTGAATTTCTTGAAC-AAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATGCT 132679806 Query 40031 GCAAAAAATGCC--AATACATGTTTAATAAAATATTTTTCATCGGG 40074 ||||| || ||| |||| | | | ||||||||| |||| || || Sbjct 132679805 GCAAAGAAAGCCAGAATATAGGAT--ATAAAATATCTTTCCTCAGG 132679762 >seq13 Length=104990034 Score = 125 bits (138), Expect = 1e-23 Identities = 102/124 (82%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 |||||||||| || || | ||| || ||||||||||| |||||||| || || || || | Sbjct 9463322 CCTCATCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 9463263 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 ||||||| ||||| | |||||||| || ||||||||||||||||| ||||| ||||| | Sbjct 9463262 TGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 9463203 Query 39759 CAAC 39762 | || Sbjct 9463202 CTAC 9463199 >seq12 Length=128289686 Score = 120 bits (132), Expect = 4e-22 Identities = 248/365 (68%), Gaps = 7/365 (2%) Strand=Plus/Minus Query 37338 TTATTTCAGTCCTGTTGATCCAAACCCTTGAGCTCCTCTATCTGTACCATCTAGAGATTG 37397 ||| ||| ||| || || ||||| || | || || || || |||| | || ||| Sbjct 60587037 TTAATTCTTTCCAGTGGAACCAAAACCACCTGAACCCCTTTCGGTGTCATCCAAAGCTTG 60586978 Query 37398 TACTTCATTCAGATCAGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCGCC 37457 ||||| | | || |||||| | || |||| | || ||||| || |||| ||| || Sbjct 60586977 AACTTCTTCTATTTCTGGATAAAAAATGCGTTCGCAAATGAGCTGTGCAATTCGATCACC 60586918 Query 37458 CGTATTTATTTTAAAATTACATTTTCCATTATTTATCAGAATGACTCCAATATTCCCCCT 37517 | | || | || ||| || ||| ||| ||| | ||| | || |||| ||| || || Sbjct 60586917 CTTTTTGACTTGAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAACATTTCCTCT 60586858 Query 37518 ATAATCTTCATCGATTACTCCGCCTCCTACATCAATA---CCTTTTAGAGACAAACCCGA 37574 ||||||||||| || || || |||||||||||||| |||| || ||| || || Sbjct 60586857 ATAATCTTCATTTATGACACCAGCTCCTACATCAATAAAGTGTTTTGCAGCCAAGCCTGA 60586798 Query 37575 TCTAGGAGCTATTCTTCCATAACAAAATTTGGGCATAGACATCCGAATATCTGTTTTAAT 37634 | ||||||| |||||||||||| || | | ||| |||| || ||||| | Sbjct 60586797 CCGTGGAGCTACTCTTCCATAACACCCAGAAGGGAGCGCTATCTGAATGTCCGTTTTCA- 60586739 Query 37635 CAATTGTCTTTCTCC--AGGAAGGATGGTATAATCGTACGCGCTATATAAATCATATCCC 37692 ||| | |||||||| ||| | || || ||||| || || || || | || || ||| Sbjct 60586738 CAAGAG-CTTTCTCCATAGGTGGTATTGTGTAATCATAGGCACTGTACAGGTCGTAGCCC 60586680 Query 37693 GCGGC 37697 ||||| Sbjct 60586679 GCGGC 60586675 >seq8 Length=140346614 Score = 120 bits (132), Expect = 4e-22 Identities = 107/134 (80%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 39641 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTG 39700 |||||||| || || | ||| || ||||| |||||||| ||||| ||||| | ||| || Sbjct 97934734 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCTTT 97934793 Query 39701 AGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCA 39760 ||||| ||||| |||||||||||||| || ||||| || |||||||| || ||||| || Sbjct 97934794 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGCC 97934853 Query 39761 ACAAGTCTCTCTCC 39774 || | ||| || || Sbjct 97934854 ACCACTCTTTCCCC 97934867 >seq14 Length=124513186 Score = 114 bits (126), Expect = 2e-20 Identities = 126/168 (75%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 70334 CACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAA 70393 |||| || | ||| |||||||| |||||||| || || | || || |||||||| || | Sbjct 61485092 CACTGAACACTTTCTTTGTTTCTTTGTGTAAGTTAGAGACAGCAATCCTGGCTGCCAGGA 61485151 Query 70394 TAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTA 70453 ||||||||||||| || | ||||| | || || ||| |||| ||||| || ||||||| Sbjct 61485152 TAGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 61485211 Query 70454 ATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 70501 ||| | || || || || | || | ||||| || |||||||||| Sbjct 61485212 GTTCCACTGTGGTGACCCCACTGTACAAGCCTTGGATTACTTTCATGG 61485259 Score = 89.7 bits (98), Expect = 7e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654 ||||||||||| || ||||| |||||||||||||| | || |||||||||| | | Sbjct 61467730 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGCTGC 61467789 Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714 ||||| |||||||| || || || | ||| || || || | || || ||||||| || Sbjct 61467790 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCAAGGC 61467849 Query 69715 TCTAGATATATCGC 69728 || || || || || Sbjct 61467850 TCCAGGTAAATAGC 61467863 >SEQ44210 Length=79069 Score = 105 bits (116), Expect = 9e-18 Identities = 245/365 (67%), Gaps = 7/365 (2%) Strand=Plus/Plus Query 37338 TTATTTCAGTCCTGTTGATCCAAACCCTTGAGCTCCTCTATCTGTACCATCTAGAGATTG 37397 ||| ||| ||| || || ||||| || | || || || || |||| | || ||| Sbjct 9459 TTAATTCTTTCCAGTGGAACCAAAACCGCCTGAACCCCTTTCGGTGTCATCCAAAGCTTG 9518 Query 37398 TACTTCATTCAGATCAGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCGCC 37457 ||||| | | || |||||| | || |||| | || || || || |||| ||| || Sbjct 9519 AACTTCTTCTATTTCTGGATAAAAAATCCGTTCGCAAATGAGTTGTGCAATTCGATCACC 9578 Query 37458 CGTATTTATTTTAAAATTACATTTTCCATTATTTATCAGAATGACTCCAATATTCCCCCT 37517 | | || | || ||| || ||| ||| ||| | ||| | || |||| ||| || || Sbjct 9579 CTTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAACATTTCCTCT 9638 Query 37518 ATAATCTTCATCGATTACTCCGCCTCCTACATCAATA---CCTTTTAGAGACAAACCCGA 37574 |||||||||||| || || || ||||||||||| || ||| || ||| || || Sbjct 9639 ATAATCTTCATCTATGACACCAGCTCCTACATCAGTAAAGTGATTTGCAGCCAAGCCTGA 9698 Query 37575 TCTAGGAGCTATTCTTCCATAACAAAATTTGGGCATAGACATCCGAATATCTGTTTTAAT 37634 | ||||||| |||||||||||| || | | ||| |||| | ||||| | Sbjct 9699 CCCTGGAGCTACTCTTCCATAACACCCAGAAGGGAGCGCTATCTGAATGTTGGTTTTCA- 9757 Query 37635 CAATTGTCTTTCTCC--AGGAAGGATGGTATAATCGTACGCGCTATATAAATCATATCCC 37692 ||| | |||||||| ||| | || || ||||| || || || || | || || ||| Sbjct 9758 CAAGAG-CTTTCTCCATAGGTGGTATTGTGTAATCATAGGCACTGTACAGGTCGTAGCCC 9816 Query 37693 GCGGC 37697 ||||| Sbjct 9817 GCGGC 9821 >seq9 Length=125784921 Score = 96.9 bits (106), Expect = 5e-15 Identities = 242/361 (67%), Gaps = 14/361 (4%) Strand=Plus/Plus Query 37347 TCCTGTTGATCCAAACCCT--TGAGCTCCTCTATCTGTACCATCTAGAGATTGTACTTCA 37404 ||| || || ||||| ||| ||| | ||| || ||| |||| | || ||| ||||| Sbjct 85039906 TCCAGTGGAACCAAAACCTCCTGAACCCCTTTAGGTGT--CATCCAAAGCTTGAACTTCT 85039963 Query 37405 TTCAGATCAGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCGCCCGTATTT 37464 | | || |||||| | || |||| | || ||||| || |||| ||| | | | || Sbjct 85039964 TCTATTTCCGGATAAAAAATCCGTTCGCAAATGAGCTGTGCAATTCGATCACACTTTTTG 85040023 Query 37465 ATTTTAAAATTACATTTTCCATTATTTATCAGAATGACTCCAATATTCCCCCTATAATCT 37524 | || ||| || ||| ||| || | ||| | || |||| ||| || ||||||||| Sbjct 85040024 ACTTCAAACTTTTCTTTGCCAAAGTTAAACAGTACAACACCAACATTTCCTCTATAATCT 85040083 Query 37525 TCATCGATTACTCCGCCTCCTACATCAATA----CCTTTTAGAGACAAACCCGATCTAGG 37580 ||||| || || || |||||||||||||| ||| || ||| || || || Sbjct 85040084 TCATCTATGACACCAGCTCCTACATCAATAAAGTGTTTTGCAAGCCAAGCCTGACTGTGG 85040143 Query 37581 AGCTATTCTTCCATAACAAAATTTGGGCATAGACATCCGAATATCTGTTTTAATCAATTG 37640 |||| |||||||||||| || | | ||| |||| || ||||| | ||| | Sbjct 85040144 AGCTCCTCTTCCATAACACCCAGAAGGGAGCGCTATCTGAATGTCCGTTTTCA-CAAGAG 85040202 Query 37641 TCTTTCTC--CAGGAAGGATGGTATAATCGTACGCGCTATATAAAT--CATATCCCGCGG 37696 ||||||| |||| | || || ||||| || || || || | | | || ||||||| Sbjct 85040203 -CTTTCTCCACAGGTGGTATTGTGTAATCATAGGCTCTGTACAGGTCCCCTAGCCCGCGG 85040261 Query 37697 C 37697 | Sbjct 85040262 C 85040262 >seq19 Length=51387494 Score = 89.7 bits (98), Expect = 7e-13 Identities = 182/265 (69%), Gaps = 9/265 (3%) Strand=Plus/Minus Query 37338 TTATTTCAGTCCTGTTGATCCAAACCCT--TGAGCTCCTCTATCTGTACCATCTAGAGAT 37395 ||| ||| ||| || || ||||| ||| ||||| ||| | ||| |||| | || | Sbjct 45564570 TTAATTCTTTCCAGTAGAACCAAAACCTCCTGAGCCCCTTTTGGTGT--CATCCAAAGCT 45564513 Query 37396 TGTACTTCATTCAGATCAGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCG 37455 || ||||| | | || ||||| | || |||| | | || ||||| || |||| ||| Sbjct 45564512 TGAACTTCTTCTATTTCTGGATAGAACATCCGTTCACAAATGAGCTGTGCAATTCGATCA 45564453 Query 37456 CCCGTATTT-ATTTTAAAATTACATTTTCCATTATTTATCAGAATGACTCCAATATTCCC 37514 | ||||| | || ||| || ||| ||| ||| | | | || |||||||| || Sbjct 45564452 CGT-TATTTGACTTCAAACTTTTCTTTGCCAAAATTAAAGACTACAACACCAATATTTCC 45564394 Query 37515 CCTATAATCTTCATCGATTACTCCGCCTCCTACAT---CAATACCTTTTAGAGACAAACC 37571 |||||||||||||| | || || ||||||||| ||| |||| || ||| || Sbjct 45564393 TCTATAATCTTCATCTGTGACACCAGCTCCTACATCTACAAAGTGTTTTGCAGCCAAGCC 45564334 Query 37572 CGATCTAGGAGCTATTCTTCCATAA 37596 || | ||||||| |||||||||| Sbjct 45564333 AGACCGTGGAGCTACTCTTCCATAA 45564309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686365850111760