Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq21 226 2e-54 seq13 113 4e-20 seq18 98.7 8e-16 seq11 87.8 1e-12 seq8 86.0 5e-12 >seq21 Length=143691637 Score = 226 bits (250), Expect = 2e-54 Identities = 618/925 (67%), Gaps = 46/925 (5%) Strand=Plus/Minus Query 43677 TGCTTACAGAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGC 43736 |||| | | |||| || | | |||||| | || || | | || ||||| || |||| Sbjct 41473567 TGCTGAGACAAAACCCCTGCCGTTTTGTCATCTTCCCCACCGAGTACCATGATATCTGGC 41473508 Query 43737 AAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAG 43796 | ||||| || || || | || || || ||||| || || || || || || | || | Sbjct 41473507 AGATGTATAAGAAGGCGGAAGCTTCCTTCTGGACCGCGGAGGAGGTGGACCTGTCCAAGG 41473448 Query 43797 AC--TTAGCACATTGGATTGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTT 43854 || || |||| | ||| | | | || || | || | | |||||||||| ||| | Sbjct 41473447 ACATTTGGCAC-TGGGAATCCCTGAAGCCCG-AGGAGAGAGATTTTATATCCCATGTTCT 41473390 Query 43855 GGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTT-AGTCGGTTTGCGC 43913 || || |||| || || || || ||||| |||| ||| ||||| ||| || || | Sbjct 41473389 GGTTTTCTTTGTAGCAAGTGATGGCATAGTAAATGCAAACTTGGTGGAGTGATTTAGC-C 41473331 Query 43914 AAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973 |||||||||| | ||||||| || ||||| | ||| || ||||||||||| ||||| | Sbjct 41473330 AAGAAGTTCAGGTGACAGAAGCCCGCTGTTTCTGTGGCTTCCAAATTGCCATGGAAAACA 41473271 Query 43974 TTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGC 44033 | ||||| | |||||| ||| | || || || || ||||| |||||| | || | | Sbjct 41473270 TACATTCTGGAATGTATAGTTTCCTTATTGACACTTACATAAAAGATCCCAAAGAAAGGG 41473211 Query 44034 A---TCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGG 44090 | ||| || ||||| || ||||| | ||| | || | || ||||| |||| Sbjct 41473210 AATTTCG---CTTCAATGCCATTGAAACGATGCCTTGTGTCAAGAAGAAGGCAGATTGGG 41473154 Query 44091 CCCTTAAATGGA-TAAATTCAAA--TGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAG 44147 || | | |||| | |||| | | | | ||| ||||| |||| | ||||| | Sbjct 41473153 CCTTGCACTGGATTGGGGACAAAGCAGCTACCTATGGGGAACGTGTTGTAGTCTTTGCTG 41473094 Query 44148 TTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAG 44207 | |||||||| ||||||| || | ||||| | ||||| ||| | |||||||||| Sbjct 41473093 CAGCGGAAGGCA---TCTTTTCTGGTTATTTTGCATCGATATTCTGGCTCAAGAAACGAG 41473037 Query 44208 GTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATT 44267 | |||||||||| | || ||||| ||||| | || ||| | ||||| || ||||| | Sbjct 41473036 GACTGATGCCTGGCCTCACCTTTTCCAATGAACTTATTAGTGGAGATGAGGGTTTACACT 41472977 Query 44268 GCGATTTTGCTTGCTTGTTACTTGGAT-ATCTAGGAGACGATAAGCCTTCATGTA--AGA 44324 | |||||||| ||| || | || || | || | | || || || | || | ||| Sbjct 41472976 GTGATTTTGCCTGCCTGAT-GTTCAATCACCTGGTACAC---AAACCAT--TGGAGGAGA 41472923 Query 44325 CAATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCAT 44384 ||| | ||| | || | | || || ||||||||| ||||| | || || | Sbjct 41472922 GAATAAGAGAAAGAATTATCAATGCTGTTTGGATAGAACAGGAATTCCTCACTGAGGCCT 41472863 Query 44385 TACCTGTAAATTTAATAGGAATGAA-TGAACTTTTGATGAACCAATATATTGAATACATT 44443 | ||||| || | || || ||||| || || | | ||||| ||||| ||||| | | Sbjct 41472862 TGCCTGTGAAGCTCATTGGGATGAATTGCAC-TCTAATGAAGCAATACATTGAGTCTGTG 41472804 Query 44444 GCAGATCGTTTAC-TTTTGGAACTGGGTTGCGATAAACACTATATT----GTACAAAACC 44498 ||||| | || | ||||||||||| | | || | || ||| | |||| Sbjct 41472803 GCAGACAG---ACATGCCGGAACTGGGTT----TTAGCAAGGTTTTCAGAGTAGAGAACC 41472751 Query 44499 CGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCG 44558 | ||||| |||||||| |||||||| || ||| || ||||| ||||| || | | Sbjct 41472750 CATTTGACTTTATGGAGAATATTTCACTGAAAG-----ACGAACTTCTTTGAGAAGAGAG 41472696 Query 44559 TTGGAGAATATCAGCGAATGGGCGT 44583 | || |||||| | ||||| || Sbjct 41472695 TAAAGGAGTATCAGAGGATGGGAGT 41472671 >seq13 Length=104990034 Score = 113 bits (124), Expect = 4e-20 Identities = 92/109 (84%), Gaps = 2/109 (2%) Strand=Plus/Plus Query 43913 CAAGAAGTTCA-ATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAA 43971 ||||||||||| |||| ||||||| || ||||| ||||| || ||||||||||| ||||| Sbjct 9461104 CAAGAAGTTCAGATTA-CAGAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAA 9461162 Query 43972 TATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020 || ||||| |||||||| |||||||| || || || ||||| |||||| Sbjct 9461163 CATACATTCTGAAATGTATAGTCTTCTTATTGACACTTACATAAAAGAT 9461211 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182 || ||||| | || || ||||| | ||||||||||| |||||||| || || ||||| Sbjct 9463187 GGTGAACGTGTCGTAGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCCGGTTCTTTTGCA 9463246 Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242 | ||||| ||| | ||||||||||| |||||||||| | || ||||| ||||| | Sbjct 9463247 TCGATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTT 9463306 Query 44243 ATAAGTCGTGATGA 44256 || || | ||||| Sbjct 9463307 ATCAGCAGAGATGA 9463320 >seq18 Length=72530122 Score = 98.7 bits (108), Expect = 8e-16 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGT 41106 |||||||| |||| || || ||| | || ||||| || || || |||| |||| Sbjct 12593671 TGATGGCACTGCCTCCATGCCATGCCCTCTGCCAGTTCTATGTGGTGAACAGTGAGCTGT 12593612 Query 41107 CATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGA 41166 | || || |||| || ||||| || |||||||| ||||| || || || ||||| || | Sbjct 12593611 CCTGCCAGCTGTACCAGAGATCGGGAGACATGGGCCTAGGTGTGCCTTTCAACATCGCCA 12593552 Query 41167 GTTATGCTCTGCTCACGTATATGATTGCACAC 41198 | || || ||||||||||| |||||||| ||| Sbjct 12593551 GCTACGCCCTGCTCACGTACATGATTGCGCAC 12593520 >seq11 Length=132960392 Score = 87.8 bits (96), Expect = 1e-12 Identities = 120/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 77394 TCCAGCCGTTCTGCTTCCAGTTCTTAACCCACTTAGTCACACCATTGATGGTGAACATGC 77453 |||| || || | ||||| | | ||| || ||||| | |||||| || || ||||| | Sbjct 33389272 TCCACCCATTTTCCTTCCCACTTTGAACACAGTTAGTTATACCATTTATAGTAAACATAC 33389213 Query 77454 TGTCTGTGTAGACGACCAGCTTCTTGATTTTGTTCTCCTGAGCTTGTTGCAGTGCTTTGG 77513 ||||||| || | ||||| || |||| || | ||| ||||||| | | |||| Sbjct 33389212 TGTCTGTATACAGAACCAGTTTACTGATGTTTTGAGCCTTTGCTTGTTCAATGGTTTTGC 33389153 Query 77514 ATGCAGCCTGGATTTCAGCGCGCTGGTTTGTCTGTTGCCCCACAAGTC 77561 | || || |||||||| || | |||||||||||| |||| ||||| Sbjct 33389152 AGGCTGCATGGATTTCTGCTCTTTGGTTTGTCTGTCGCCCAGGAAGTC 33389105 >seq8 Length=140346614 Score = 86.0 bits (94), Expect = 5e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552 |||| || ||||||||||||||||| ||||| || ||||| |||||||| || ||||| | Sbjct 97923245 AAAATCCTTTTGATTTTATGGAAAACATTTCTTTAGAAGGAAAAACAAATTTCTTTGAGA 97923186 Query 44553 AACGCGTTGGAGAATATCAGCG 44574 |||| ||| || |||||||| Sbjct 97923185 AACGAGTTTCGGAGTATCAGCG 97923164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397149694820170