Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq5 107 2e-18 seq7 96.9 3e-15 seq16 84.2 2e-11 seq15 82.4 6e-11 seq13 82.4 6e-11 >seq5 Length=183742232 Score = 107 bits (118), Expect = 2e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 27016 TATTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGT 27075 || |||| || |||| ||||| |||| || | || || ||||| || || ||||||| Sbjct 52769880 TAATGCCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGT 52769939 Query 27076 CGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCG 27135 | | |||| | ||||| |||||||| ||||| | || |||||||| || || | Sbjct 52769940 CTGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAG 52769999 Query 27136 GCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTT 27195 | || | |||||| || || || ||| ||| | | | || | ||||| ||| | Sbjct 52770000 GTGGGATACCCTCCTTGTCTTGAATTTTGGCTTTGACGTTCTCAATGGTGTCACTGGGCT 52770059 Query 27196 CAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || || | ||||||||| || || ||||||||||| ||||| Sbjct 52770060 CGACCTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 52770111 >seq7 Length=162899863 Score = 96.9 bits (106), Expect = 3e-15 Identities = 157/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 27016 TATTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGT 27075 || |||| || |||| ||||| |||| || | || || ||||| || || ||||||| Sbjct 148001500 TAATGCCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGT 148001441 Query 27076 CGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCG 27135 | | |||| | ||||| |||||||| ||||| | || |||||||| || || | Sbjct 148001440 CTGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAG 148001381 Query 27136 GCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTT 27195 | || | |||||| || || || ||| ||| | | || | ||||| ||| | Sbjct 148001380 GTGGGATACCCTCCTTGTCTTGAATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCT 148001321 Query 27196 CAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGAT 27241 | || || || || || | ||||||||| || || ||||||||||| Sbjct 148001320 CGACCTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAAGAT 148001275 >seq16 Length=74961506 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| || | || |||| |||| || | || || || || || || |||||||| Sbjct 15839724 GCCACCCCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGA 15839783 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | |||| | ||||| ||||| || || || | ||||| | ||| || || || || Sbjct 15839784 GAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGG 15839843 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | || |||||||| ||||||| |||| |||| | ||||| ||| || || Sbjct 15839844 GATGCCTTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCAC 15839903 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| ||||| || ||||||||||| |||||| Sbjct 15839904 CTCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATA 15839952 >seq15 Length=108049171 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTC 27094 ||| || | ||| | ||||| || ||||||||||||||||| || | || | || Sbjct 106343126 CAAAACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 106343067 Query 27095 TTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATC 27154 ||| || || || || || | || || | || ||||| || || | || || ||||| Sbjct 106343066 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 106343007 Query 27155 GGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGA 27214 ||||||| || | ||||| || || | || ||||||||| || || || | Sbjct 106343006 CTGGATCTTGGCCTTTACATTTTCTGTCGTATCCGAGGGTTCAACTTCGAGGGTGATGGT 106342947 Query 27215 TTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| || |||||||| || || ||||| Sbjct 106342946 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 106342914 >seq13 Length=104990034 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTC 27094 ||| || | ||| | ||||| || ||||||||||||||||| || | || | || Sbjct 67300738 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 67300679 Query 27095 TTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATC 27154 ||| || || || || || | || || | || ||||| || || | || || ||||| Sbjct 67300678 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 67300619 Query 27155 GGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGA 27214 ||||||| || | |||||| || || | || |||||| || || || || | Sbjct 67300618 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 67300559 Query 27215 TTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| || |||||||| || || ||||| Sbjct 67300558 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 67300526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424606918196208