Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq18 134 1e-26 seq16 113 4e-20 SEQ44220 111 1e-19 seq13 109 4e-19 seq11 109 4e-19 seq1 109 4e-19 seq2 105 5e-18 seq5 95.1 1e-14 seq6301 87.8 1e-12 seq6 82.4 6e-11 >seq18 Length=72530122 Score = 134 bits (148), Expect = 1e-26 Identities = 128/164 (78%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001 || || |||| ||| || |||||||||||||| || | ||||||||||||||| || || Sbjct 12593509 AGGCCCGTGATGTGCGCAATCATGTACGTGAGCAGGGCGTAGCTGGCGATGTTGAAAGGC 12593568 Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061 || || || |||||||| ||||| |||||||| ||||| || || ||||| | || | Sbjct 12593569 ACACCTAGGCCCATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACC 12593628 Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAG 30105 || || ||||| || | ||| ||||| ||||| || ||||| || Sbjct 12593629 ACATAGAACTGGCAGAGGGCATGGCATGGAGGCAGTGCCATCAG 12593672 Score = 123 bits (136), Expect = 2e-23 Identities = 128/168 (76%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282 ||| || |||| ||||| || ||||||||||||||||| || || || || |||| ||| Sbjct 12597686 CATATCTCTGTATTCTGCCCCAAAATGCCTCCACTGGAAGCCATAAACTGGACCCAAGTC 12597745 Query 30283 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30342 || ||||| ||| ||| ||| ||||||||||||||| ||| || ||||| || Sbjct 12597746 CCCTTCTTCTCTGGCGGAGAACCCCAGGCTGTCCAAAAAGTCTCGGGATCCATTGGCATC 12597805 Query 30343 CCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCC 30390 |||||| || || ||||| ||| |||||||| | |||||||| || Sbjct 12597806 CCAGATTTTCACTCCCTTGGAAGACAGCTCTTTAGCATTTGTGGATCC 12597853 >seq16 Length=74961506 Score = 113 bits (124), Expect = 4e-20 Identities = 184/260 (71%), Gaps = 10/260 (4%) Strand=Plus/Plus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||||||||| || || || || || || |||||||| |||| || || || | | Sbjct 15672526 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTT 15672585 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 | ||||| |||||| || || ||||||||||||||||| ||||||| ||||||| || Sbjct 15672586 TAAAGGTCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATT 15672645 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 110557 ||| || ||| |||||||| || | |||| | ||| | || | | | || || | | Sbjct 15672646 CTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCTGAATTCACTCC 15672704 Query 110558 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACAC 110616 || || |||| ||||| || ||||| || |||||||||||| ||||| || Sbjct 15672705 TGAG------CGGCGGCCAGGGCAGGTCCCCGTTCTTGCCGATGCCCATGTTCTGG-GAC 15672757 Query 110617 GCGGCCACGATACCGTTCAG 110636 | || ||||| | ||| || Sbjct 15672758 ACAGCGACGATGCAGTTTAG 15672777 >SEQ44220 Length=82126 Score = 111 bits (122), Expect = 1e-19 Identities = 185/261 (71%), Gaps = 11/261 (4%) Strand=Plus/Minus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||||||||| || || || || || || |||||||| |||| || || || | | Sbjct 35522 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTT 35463 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTT-TCTACCCATTATCACCACGT 110497 | ||||| |||||| || || ||||||||||||||||| | ||||||| ||||||| | Sbjct 35462 TAAAGGTCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTTACCCATAATCACCAGAT 35403 Query 110498 TCTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTG 110556 |||| || ||| |||||||| || | |||| | ||| | || | | | || || | Sbjct 35402 TCTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCTGAATTCACTC 35344 Query 110557 CAAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACA 110615 | || || |||| ||||| || ||||| || |||||||||||| ||||| | Sbjct 35343 CTGAG------CGGCGGCCAGGGCAGGTCCCCGTTCTTGCCGATGCCCATGTTCTGG-GA 35291 Query 110616 CGCGGCCACGATACCGTTCAG 110636 | | || ||||| | ||| || Sbjct 35290 CACAGCGACGATGCAGTTTAG 35270 >seq13 Length=104990034 Score = 109 bits (120), Expect = 4e-19 Identities = 185/260 (71%), Gaps = 11/260 (4%) Strand=Plus/Minus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||||||||| || || || || || || |||||||| |||| || || || | | Sbjct 66710574 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTT 66710515 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 | ||||| |||||| | || ||||||||||||||||| ||||||| ||||||| || Sbjct 66710514 TAAAGGTCAATTCTTCTAGGA-ATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATT 66710456 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 110557 ||| |||||| |||||||| || | |||| | ||| | || | | | || || || | Sbjct 66710455 CTGTTTGCCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCTGAATTCATTCC 66710397 Query 110558 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACAC 110616 | ||| | |||| ||||| || | ||| || |||||||||||| ||||| || Sbjct 66710396 TGA-----GCA-GTGGCCAGGGCAGGTCCCTGTTCTTGCCGATGCCCATGTTCTGG-GAC 66710344 Query 110617 GCGGCCACGATACCGTTCAG 110636 | || ||||| | ||| || Sbjct 66710343 ACAGCGACGATGCAGTTTAG 66710324 Score = 109 bits (120), Expect = 4e-19 Identities = 185/260 (71%), Gaps = 11/260 (4%) Strand=Plus/Minus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||||||||| || || || || || || |||||||| |||| || || || | | Sbjct 66715130 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTT 66715071 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 | ||||| |||||| | || ||||||||||||||||| ||||||| ||||||| || Sbjct 66715070 TAAAGGTCAATTCTTCTAGGA-ATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATT 66715012 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 110557 ||| |||||| |||||||| || | |||| | ||| | || | | | || || || | Sbjct 66715011 CTGTTTGCCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCTGAATTCATTCC 66714953 Query 110558 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACAC 110616 | ||| | |||| ||||| || | ||| || |||||||||||| ||||| || Sbjct 66714952 TGA-----GCA-GTGGCCAGGGCAGGTCCCTGTTCTTGCCGATGCCCATGTTCTGG-GAC 66714900 Query 110617 GCGGCCACGATACCGTTCAG 110636 | || ||||| | ||| || Sbjct 66714899 ACAGCGACGATGCAGTTTAG 66714880 >seq11 Length=132960392 Score = 109 bits (120), Expect = 4e-19 Identities = 183/260 (70%), Gaps = 10/260 (4%) Strand=Plus/Plus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||||||||| || || || || || || |||||||| |||| || || | | | Sbjct 79055317 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTTTACCCTT 79055376 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 | ||||| |||||| || || ||||||||||||||||| ||||||| ||||||| || Sbjct 79055377 TAAAGGTCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATT 79055436 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 110557 ||| || ||| |||||||| || | |||| | ||| | || | | | || || | | Sbjct 79055437 CTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCTGAATTCACTCC 79055495 Query 110558 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACAC 110616 || || |||| ||||| || ||||| || |||||||||||| ||||| || Sbjct 79055496 TGAG------CGGCGGCCAGGGCAGGTCCCCGTTCTTGCCGATGCCCATGTTCTGG-GAC 79055548 Query 110617 GCGGCCACGATACCGTTCAG 110636 | || ||||| | ||| || Sbjct 79055549 ACAGCGACGATGCAGTTTAG 79055568 >seq1 Length=217458864 Score = 109 bits (120), Expect = 4e-19 Identities = 188/267 (70%), Gaps = 12/267 (4%) Strand=Plus/Minus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||||||||| || || || || || || |||||||| |||| || || || | | Sbjct 137902070 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTT 137902011 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 | ||||| |||||| || || ||||||||||||||||| ||||||| ||||||| || Sbjct 137902010 TAAAGGTCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATT 137901951 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 110557 ||| || ||| |||||||| || | |||| | ||| | || | | || || || | Sbjct 137901950 CTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCCGAATTCATTCC 137901892 Query 110558 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACAC 110616 || || |||| ||||| || || || || |||||||||||| ||||| || Sbjct 137901891 TGAG------CGGCGGCCAGGGCAGGTCCCCATTCTTGCCGATGCCCATGTTCTGG-GAC 137901839 Query 110617 GCGGCCACGATACCGTTCA--GAATGA 110641 | || ||||| | ||| | |||||| Sbjct 137901838 ACAGCGACGATGCAGTTTAGCGAATGA 137901812 >seq2 Length=188283584 Score = 105 bits (116), Expect = 5e-18 Identities = 180/259 (69%), Gaps = 8/259 (3%) Strand=Plus/Plus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||||||||| || || || || || || |||||||| |||| || || | || | Sbjct 14284424 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTGTATCCTT 14284483 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 | ||||| |||| | || || ||||||||||| ||||| |||||||| ||||||| || Sbjct 14284484 TAAAGGTCGATTCGTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATAATCACCAGATT 14284543 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 110557 ||| || ||| |||||||| | | |||| | ||| | || | | || || || | Sbjct 14284544 CTGTTTACCTTCTACTGAAGAAGGTGTGGTC-ATTCTCTGGAAATACCTGAATTCATTCC 14284602 Query 110558 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATGTCTGGACACG 110617 | || || |||| ||||| || || || || ||||||||||||| | | || Sbjct 14284603 AGAG------CGGCGGCCAGGGCAGTTCCCCATTCTTGCCGATGCCCATGTTTTGGGACA 14284656 Query 110618 CGGCCACGATACCGTTCAG 110636 | || ||||| | ||| || Sbjct 14284657 CAGCGACGATGCAGTTTAG 14284675 >seq5 Length=183742232 Score = 95.1 bits (104), Expect = 1e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||||||||| || || || || || || |||||||| ||| || || || | | Sbjct 15329035 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGATCTAAATTAATTCTACCCTT 15329094 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 | |||| |||||| || || ||||||||||||||||| ||||||| ||||||| || Sbjct 15329095 TAAAGGTTGATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATT 15329154 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCA 110530 ||| || ||| |||||||| || | ||||| Sbjct 15329155 CTGTTTACCTTCTACTGAAGAGGTTGTGGTCA 15329186 >seq6301 Length=363437 Score = 87.8 bits (96), Expect = 1e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 110392 GGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTC 110451 || || || || || || |||||||| |||| || || || || | | ||||| || | Sbjct 43362 GGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTATCCTTTAAAGGTCGATCC 43303 Query 110452 TTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCTCTG 110511 || || || ||||||||||| ||||| |||| ||| ||||||| ||||| || ||| Sbjct 43302 TTCTCAGGAATGGAGAACCAGGTCTTCCTACGCATAATCACCAGATTCTGTTTACCTTCT 43243 Query 110512 ACTGAAGA 110519 |||||||| Sbjct 43242 ACTGAAGA 43235 >seq6 Length=175400206 Score = 82.4 bits (90), Expect = 6e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 110401 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 110460 || || || |||||||| |||| || || || | | | ||||| |||||| || || Sbjct 75113275 TTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTTTAAAGGTCGATTCTTCTCAGGA 75113334 Query 110461 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508 ||||||||||||||||| ||||||| ||||||| ||||| || ||| Sbjct 75113335 ATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATTCTGTTTACCT 75113382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405997271049528