Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq18 145 6e-30 seq16 109 4e-19 SEQ44220 107 2e-18 seq1 105 5e-18 seq11 104 2e-17 seq2 100 2e-16 seq13 91.5 1e-13 seq5 86.0 5e-12 seq6 82.4 6e-11 >seq18 Length=72530122 Score = 145 bits (160), Expect = 6e-30 Identities = 131/165 (79%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || || |||| ||| || |||||||||||||| || | ||||||||||||||| || ||| Sbjct 12593509 AGGCCCGTGATGTGCGCAATCATGTACGTGAGCAGGGCGTAGCTGGCGATGTTGAAAGGC 12593568 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || || || |||||||| || || |||||||| |||||||| || ||||| | || | Sbjct 12593569 ACACCTAGGCCCATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACC 12593628 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGA 29878 || || ||||| || | ||||||||| ||||| || ||||| ||| Sbjct 12593629 ACATAGAACTGGCAGAGGGCATGGCATGGAGGCAGTGCCATCAGA 12593673 Score = 105 bits (116), Expect = 5e-18 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 ||||||||||||||||| || || || || |||| ||| || ||||| ||| ||| Sbjct 12597708 AAATGCCTCCACTGGAAGCCATAAACTGGACCCAAGTCCCCTTCTTCTCTGGCGGAGAAC 12597767 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 ||| ||||||||||||||| ||| || ||||| |||||||| || || ||||| Sbjct 12597768 CCCAGGCTGTCCAAAAAGTCTCGGGATCCATTGGCATCCCAGATTTTCACTCCCTTGGAA 12597827 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCC 30162 || |||||||| | |||||||| || Sbjct 12597828 GACAGCTCTTTAGCATTTGTGGATCC 12597853 >seq16 Length=74961506 Score = 109 bits (120), Expect = 4e-19 Identities = 183/260 (70%), Gaps = 10/260 (4%) Strand=Plus/Plus Query 114262 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCT 114321 ||||||||| || || || || || || |||||||| |||| || | || | | Sbjct 15672526 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTT 15672585 Query 114322 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 114381 | ||||| |||||| || || ||||||||||||||||| ||||||| ||||||| || Sbjct 15672586 TAAAGGTCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATT 15672645 Query 114382 CTGCTTACCTCTGTCGGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 114440 ||| |||||| | ||||| || | |||| | ||| | || | | | || || Sbjct 15672646 CTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCTGAATTC----- 15672699 Query 114441 AAAGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACAC 114499 | || | ||| |||| ||||| || ||||| || |||||||||||| ||||| || Sbjct 15672700 -ACTCCTGAGCGGCGGCCAGGGCAGGTCCCCGTTCTTGCCGATGCCCATGTTCTGG-GAC 15672757 Query 114500 GCTGCCACGATACCGTTCAG 114519 | || ||||| | ||| || Sbjct 15672758 ACAGCGACGATGCAGTTTAG 15672777 >SEQ44220 Length=82126 Score = 107 bits (118), Expect = 2e-18 Identities = 184/261 (70%), Gaps = 11/261 (4%) Strand=Plus/Minus Query 114262 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCT 114321 ||||||||| || || || || || || |||||||| |||| || | || | | Sbjct 35522 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTT 35463 Query 114322 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTT-TCTACCCATTATCACCACGT 114380 | ||||| |||||| || || ||||||||||||||||| | ||||||| ||||||| | Sbjct 35462 TAAAGGTCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTTACCCATAATCACCAGAT 35403 Query 114381 TCTGCTTACCTCTGTCGGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTG 114439 |||| |||||| | ||||| || | |||| | ||| | || | | | || || Sbjct 35402 TCTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCTGAATTC---- 35348 Query 114440 CAAAGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACA 114498 | || | ||| |||| ||||| || ||||| || |||||||||||| ||||| | Sbjct 35347 --ACTCCTGAGCGGCGGCCAGGGCAGGTCCCCGTTCTTGCCGATGCCCATGTTCTGG-GA 35291 Query 114499 CGCTGCCACGATACCGTTCAG 114519 | | || ||||| | ||| || Sbjct 35290 CACAGCGACGATGCAGTTTAG 35270 >seq1 Length=217458864 Score = 105 bits (116), Expect = 5e-18 Identities = 187/267 (70%), Gaps = 12/267 (4%) Strand=Plus/Minus Query 114262 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCT 114321 ||||||||| || || || || || || |||||||| |||| || | || | | Sbjct 137902070 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTT 137902011 Query 114322 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 114381 | ||||| |||||| || || ||||||||||||||||| ||||||| ||||||| || Sbjct 137902010 TAAAGGTCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATT 137901951 Query 114382 CTGCTTACCTCTGTCGGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 114440 ||| |||||| | ||||| || | |||| | ||| | || | | || || || Sbjct 137901950 CTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCCGAATTCATT-- 137901894 Query 114441 AAAGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACAC 114499 || | ||| |||| ||||| || || || || |||||||||||| ||||| || Sbjct 137901893 ----CCTGAGCGGCGGCCAGGGCAGGTCCCCATTCTTGCCGATGCCCATGTTCTGG-GAC 137901839 Query 114500 GCTGCCACGATACCGTTCA--GAATGA 114524 | || ||||| | ||| | |||||| Sbjct 137901838 ACAGCGACGATGCAGTTTAGCGAATGA 137901812 >seq11 Length=132960392 Score = 104 bits (114), Expect = 2e-17 Identities = 182/260 (70%), Gaps = 10/260 (4%) Strand=Plus/Plus Query 114262 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCT 114321 ||||||||| || || || || || || |||||||| |||| || | | | | Sbjct 79055317 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTTTACCCTT 79055376 Query 114322 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 114381 | ||||| |||||| || || ||||||||||||||||| ||||||| ||||||| || Sbjct 79055377 TAAAGGTCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATT 79055436 Query 114382 CTGCTTACCTCTGTCGGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 114440 ||| |||||| | ||||| || | |||| | ||| | || | | | || || Sbjct 79055437 CTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCTGAATTC----- 79055490 Query 114441 AAAGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACAC 114499 | || | ||| |||| ||||| || ||||| || |||||||||||| ||||| || Sbjct 79055491 -ACTCCTGAGCGGCGGCCAGGGCAGGTCCCCGTTCTTGCCGATGCCCATGTTCTGG-GAC 79055548 Query 114500 GCTGCCACGATACCGTTCAG 114519 | || ||||| | ||| || Sbjct 79055549 ACAGCGACGATGCAGTTTAG 79055568 >seq2 Length=188283584 Score = 100 bits (110), Expect = 2e-16 Identities = 179/259 (69%), Gaps = 8/259 (3%) Strand=Plus/Plus Query 114262 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCT 114321 ||||||||| || || || || || || |||||||| |||| || | | || | Sbjct 14284424 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTGTATCCTT 14284483 Query 114322 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 114381 | ||||| |||| | || || ||||||||||| ||||| |||||||| ||||||| || Sbjct 14284484 TAAAGGTCGATTCGTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATAATCACCAGATT 14284543 Query 114382 CTGCTTACCTCTGTCGGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 114440 ||| |||||| | ||||| | | |||| | ||| | || | | || || || | Sbjct 14284544 CTGTTTACCTTCTACTGAAGAAGGTGTGGTC-ATTCTCTGGAAATACCTGAATTCATTCC 14284602 Query 114441 AAAGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATGTCTGGACACG 114500 | || ||| |||| ||||| || || || || ||||||||||||| | | || Sbjct 14284603 AGAG------CGGCGGCCAGGGCAGTTCCCCATTCTTGCCGATGCCCATGTTTTGGGACA 14284656 Query 114501 CTGCCACGATACCGTTCAG 114519 | || ||||| | ||| || Sbjct 14284657 CAGCGACGATGCAGTTTAG 14284675 >seq13 Length=104990034 Score = 91.5 bits (100), Expect = 1e-13 Identities = 180/260 (69%), Gaps = 11/260 (4%) Strand=Plus/Minus Query 114262 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCT 114321 ||||||||| || || || || || || |||||||| |||| || | || | | Sbjct 66710574 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTT 66710515 Query 114322 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 114381 | ||||| |||||| | || ||||||||||||||||| ||||||| ||||||| || Sbjct 66710514 TAAAGGTCAATTCTTCTAGGA-ATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATT 66710456 Query 114382 CTGCTTACCTCTGTCGGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 114440 ||| || ||| | ||||| || | |||| | ||| | || | | | || || || Sbjct 66710455 CTGTTTGCCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCTGAATTCATT-- 66710399 Query 114441 AAAGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACAC 114499 || | | | |||| ||||| || | ||| || |||||||||||| ||||| || Sbjct 66710398 ----CCTGAGCAGTGGCCAGGGCAGGTCCCTGTTCTTGCCGATGCCCATGTTCTGG-GAC 66710344 Query 114500 GCTGCCACGATACCGTTCAG 114519 | || ||||| | ||| || Sbjct 66710343 ACAGCGACGATGCAGTTTAG 66710324 Score = 91.5 bits (100), Expect = 1e-13 Identities = 180/260 (69%), Gaps = 11/260 (4%) Strand=Plus/Minus Query 114262 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCT 114321 ||||||||| || || || || || || |||||||| |||| || | || | | Sbjct 66715130 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTT 66715071 Query 114322 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 114381 | ||||| |||||| | || ||||||||||||||||| ||||||| ||||||| || Sbjct 66715070 TAAAGGTCAATTCTTCTAGGA-ATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATT 66715012 Query 114382 CTGCTTACCTCTGTCGGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 114440 ||| || ||| | ||||| || | |||| | ||| | || | | | || || || Sbjct 66715011 CTGTTTGCCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCTGAATTCATT-- 66714955 Query 114441 AAAGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACAC 114499 || | | | |||| ||||| || | ||| || |||||||||||| ||||| || Sbjct 66714954 ----CCTGAGCAGTGGCCAGGGCAGGTCCCTGTTCTTGCCGATGCCCATGTTCTGG-GAC 66714900 Query 114500 GCTGCCACGATACCGTTCAG 114519 | || ||||| | ||| || Sbjct 66714899 ACAGCGACGATGCAGTTTAG 66714880 >seq5 Length=183742232 Score = 86.0 bits (94), Expect = 5e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 114262 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCT 114321 ||||||||| || || || || || || |||||||| ||| || | || | | Sbjct 15329035 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGATCTAAATTAATTCTACCCTT 15329094 Query 114322 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 114381 | |||| |||||| || || ||||||||||||||||| ||||||| ||||||| || Sbjct 15329095 TAAAGGTTGATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATT 15329154 Query 114382 CTGCTTACCTCTGTCGGAAGACGTAGCGGTCA 114413 ||| |||||| | ||||| || | ||||| Sbjct 15329155 CTGTTTACCTTCTACTGAAGAGGTTGTGGTCA 15329186 >seq6 Length=175400206 Score = 82.4 bits (90), Expect = 6e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343 || || || |||||||| |||| || | || | | | ||||| |||||| || || Sbjct 75113275 TTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTTTAAAGGTCGATTCTTCTCAGGA 75113334 Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 ||||||||||||||||| ||||||| ||||||| ||||| |||||| Sbjct 75113335 ATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATTCTGTTTACCT 75113382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405850184491324