Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq21 271 6e-68 SEQ44210 127 2e-24 seq12 127 2e-24 seq9 107 2e-18 seq4 100 2e-16 seq19 91.5 1e-13 seq13 91.5 1e-13 seq8 89.7 4e-13 seq2 86.0 5e-12 >seq21 Length=143691637 Score = 271 bits (300), Expect = 6e-68 Identities = 523/761 (69%), Gaps = 19/761 (2%) Strand=Plus/Plus Query 4379 TCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCT 4438 || ||| || ||| | || || || || |||| || ||| || || ||||| | | Sbjct 41472795 TCTGTCTGCCACAGACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCTT 41472854 Query 4439 CACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATC 4498 |||||| | || | || | || || |||||||| || || | | ||| | || Sbjct 41472855 CACAGGCAAGGCCTCAGTGAGGAATTCCTGTTCTATCCAAACAGCATTGATAATTCTTTC 41472914 Query 4499 TTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATC 4558 | ||||| | || | ||||||| | ||| | || |||| | || |||||||| Sbjct 41472915 TCTTATTCTCTCCTCCAATGGTTTGTGTACCAGGTGATTGAACATCAGGCAGGCAAAATC 41472974 Query 4559 ACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAA 4618 ||| || ||||| || |||| ||||| ||||| || ||||| || | || ||||| | Sbjct 41472975 ACAGTGTAAACCCTCATCTCCACTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCATCAG 41473034 Query 4619 ACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTAC 4678 |||| || || ||||| ||||| | ||||| | ||||||||| |||||||| | Sbjct 41473035 TCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAAG---ATGCCTTCCGC 41473091 Query 4679 GGCGGCAAACGCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTTTAATCCATTTTA 4737 || ||||| |||| | || ||| | | |||| |||||||| |||||| | | Sbjct 41473092 TGCAGCAAAGACTACAACACGTTCCCCATAGGTAGCT-GCTTTGTCCCCAATCCAGTGCA 41473150 Query 4738 ATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAA---TAATT 4794 | ||||| | || || ||||| || || || || || | || || || || |||| Sbjct 41473151 AGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGCGAAATT 41473210 Query 4795 TACTTTTTTCAAATGGG-TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAA 4853 |||| || |||| |||| || |||||||| || || | ||||||||| ||||| Sbjct 41473211 CCCTTTCTT----TGGGATCTTTTATGTAAGTGTCAATAAGGAAACTATACATTCCAGAA 41473266 Query 4854 TGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACT 4913 ||||| ||||| || ||||| || || || | || || | |||||||| || |||||| Sbjct 41473267 TGTATGTTTTCCATGGCAATTTGGAAGCCACAGAAACAGCGGGCTTCTGTCACCTGAACT 41473326 Query 4914 TCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAAC 4973 || | | ||||| || || |||||| | |||||||| || ||||| ||| |||| || Sbjct 41473327 TCTTGGCTAAATCACTCCACCAAGTTTGCATTTACTATGCCATCACTTGCTACAAAGAAA 41473386 Query 4974 GCCAAAACATGAGATATAAAGTACTGT-TCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAA 5032 ||| |||||| |||||||| | || | || || ||||| || || ||||| | ||| Sbjct 41473387 ACCAGAACATGGGATATAAAAT-CTCTCTCCTCGGGCTTCAGGGATTCCCAGT--GCCAA 41473443 Query 5033 A--TCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTAC 5090 | || || | | || || || || | ||||| || || |||||||| || || ||| Sbjct 41473444 ATGTCCTTGGACAGGTCCACCTCCTCCGCGGTCCAGAAGGAAGCTTCCGCCTTCTTATAC 41473503 Query 5091 ATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAA 5131 || ||| |||||| | |||| | || | |||||||| Sbjct 41473504 ATCTGCCAGATATCATGGTACTCGGTGGGGAAGATGACAAA 41473544 Score = 156 bits (172), Expect = 4e-33 Identities = 327/483 (68%), Gaps = 11/483 (2%) Strand=Plus/Minus Query 4548 CACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAAT 4607 || ||||| | ||| || ||||| || || |||||||| ||||| || ||||| || | Sbjct 132680219 CAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGG 132680160 Query 4608 CCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAAT 4667 || ||||| | ||| || | ||||| ||||| ||||| || ||||||||||| Sbjct 132680159 CCAGGCATCAGTCCTTGTTTCCTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGAAG 132680100 Query 4668 ATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTA 4727 ||| ||| || |||||| ||| | | || || | |||||| | Sbjct 132680099 GTGCTTTCCACTAGGGCAAAGGCTGCAACACGTTCTCCATGGGTAACATCTTTGTTCCCA 132680040 Query 4728 ATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTA 4787 ||||| || |||| || || ||||| || || || ||||| || || || Sbjct 132680039 ATCCAACACAAGACCCAAACTGCCTTCTTCTTGACACA-GGCATTGTTCCAATGGCATTG 132679981 Query 4788 AATA---ATTTACTTTTTTCAAATGGG-TCTTGAATATAAGTGTCTATTAGTAGGCTATA 4843 || | ||| |||| || || |||| ||| | ||||| || || || |||| Sbjct 132679980 AAGAGAAATTCCCTTTCTT----TGTTATCTTTAATGT--GTGTCAATAAGGAGACTATT 132679927 Query 4844 CATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGT 4903 || ||||||||||| |||||| ||||||| || || || || ||||| | |||||| Sbjct 132679926 TATGTCAGAATGTATGTTTTCTGTAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTCTGT 132679867 Query 4904 TACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGC 4963 | |||| ||| | | |||| ||| || |||||||| | |||||| || |||| || Sbjct 132679866 AATCTGAATTTCTTGAACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATGC 132679807 Query 4964 TGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCA 5023 |||||| || |||| || || |||||||| || ||| |||||||| || || ||| Sbjct 132679806 TGCAAAGAAAGCCAGAATATAGGATATAAAATATCTTTCCTCAGGCTTCAGGGCTTCCCA 132679747 Query 5024 GTG 5026 ||| Sbjct 132679746 GTG 132679744 >SEQ44210 Length=79069 Score = 127 bits (140), Expect = 2e-24 Identities = 162/220 (74%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 31765 AGCGCTAGTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGC 31824 ||| || || |||||| | ||||| || | | ||||| ||||| || ||| || |||| Sbjct 9765 AGCTCTTGTGAAAACCAACATTCAGATAGCGCTCCCTTCTGGGTGTTATGGAAGAGTAGC 9706 Query 31825 TCCTAGATCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTC 31884 ||| | || || ||||| | || ||||||| || || || || ||||| |||||| Sbjct 9705 TCCAGGGTCAGGCTTGGCTGCAAATCACTTTACTGATGTAGGAGCTGGTGTCATAGATGA 9646 Query 31885 AGACTATAGAGGAAACGTTGGAATTGTGTTGTTTAATTTTGG---AGAAAAATCATACAG 31941 ||| ||||||||||| ||||| |||| ||||||||||||| |||||| | | || Sbjct 9645 AGATTATAGAGGAAATGTTGGTGTTGTACTGTTTAATTTTGGCAAAGAAAAGT-TTGAAG 9587 Query 31942 TATAAAAAAGGGCGATAGGGTAGCTCAACTAATTTGCGAA 31981 | |||||||| ||| | | || ||||| ||||||||| Sbjct 9586 --TCAAAAAGGGTGATCGAATTGCACAACTCATTTGCGAA 9549 >seq12 Length=128289686 Score = 127 bits (140), Expect = 2e-24 Identities = 162/220 (74%), Gaps = 6/220 (3%) Strand=Plus/Plus Query 31765 AGCGCTAGTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGC 31824 ||| || || ||||| || ||||| || | | ||||| ||||| || ||| || |||| Sbjct 60586731 AGCTCTTGTGAAAACGGACATTCAGATAGCGCTCCCTTCTGGGTGTTATGGAAGAGTAGC 60586790 Query 31825 TCCTAGATCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTC 31884 ||| | || || ||||| | ||||||||||| || || || || ||||| ||| || Sbjct 60586791 TCCACGGTCAGGCTTGGCTGCAAAACACTTTATTGATGTAGGAGCTGGTGTCATAAATGA 60586850 Query 31885 AGACTATAGAGGAAACGTTGGAATTGTGTTGTTTAATTTTGG---AGAAAAATCATACAG 31941 ||| ||||||||||| ||||| |||| ||||||||||||| |||||| | | || Sbjct 60586851 AGATTATAGAGGAAATGTTGGTGTTGTACTGTTTAATTTTGGCAAAGAAAAGT--TTCA- 60586907 Query 31942 TATAAAAAAGGGCGATAGGGTAGCTCAACTAATTTGCGAA 31981 | |||||||| ||| | | || || || ||||||||| Sbjct 60586908 AGTCAAAAAGGGTGATCGAATTGCACAGCTCATTTGCGAA 60586947 >seq9 Length=125784921 Score = 107 bits (118), Expect = 2e-18 Identities = 159/221 (72%), Gaps = 7/221 (3%) Strand=Plus/Minus Query 31765 AGCGCTAGTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGC 31824 ||| || || ||||| || ||||| || | | ||||| ||||| || ||| || ||| Sbjct 85040204 AGCTCTTGTGAAAACGGACATTCAGATAGCGCTCCCTTCTGGGTGTTATGGAAGAGGAGC 85040145 Query 31825 TCCTAGATCTGGATTGGCA-GTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATT 31883 ||| || || ||||| | ||||||||||| || || || || ||||| |||||| Sbjct 85040144 TCCACAGTCAGGCTTGGCTTGCAAAACACTTTATTGATGTAGGAGCTGGTGTCATAGATG 85040085 Query 31884 CAGACTATAGAGGAAACGTTGGAATTGTGTTGTTTAATTTTGG---AGAAAAATCATACA 31940 ||| ||||||||||| ||||| |||| ||||||| ||||| |||||| | | | Sbjct 85040084 AAGATTATAGAGGAAATGTTGGTGTTGTACTGTTTAACTTTGGCAAAGAAAAGT-TTGAA 85040026 Query 31941 GTATAAAAAAGGGCGATAGGGTAGCTCAACTAATTTGCGAA 31981 | | |||||| | ||| | | || || || ||||||||| Sbjct 85040025 G--TCAAAAAGTGTGATCGAATTGCACAGCTCATTTGCGAA 85039987 >seq4 Length=166074386 Score = 100 bits (110), Expect = 2e-16 Identities = 115/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 31775 AAAACCGATATTCAAATTTCTTTACCTTCA--GGGTGCTACGGACGAATAGCTCCTAGAT 31832 ||||| || ||||| || || | ||||| ||||| || ||| || ||| ||| | | Sbjct 81260494 AAAACAGACATTCAGATAGCTCTTCCTTCTCTGGGTGTTATGGAAGAGTAGTTCCATGGT 81260435 Query 31833 CTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTATA 31892 |||| ||||| | ||||||||||| || || || || ||||| ||||| | | |||| Sbjct 81260434 CTGGCTTGGCTGCAAAACACTTTATTGATGTAGGAGCTGGTGTCATAGACGAAAATTATA 81260375 Query 31893 GAGGAAACGTTGGAATTGTGTTGTTTAATTTTGG 31926 ||||||| |||| |||| ||||||||||||| Sbjct 81260374 GAGGAAATATTGGTGTTGTACTGTTTAATTTTGG 81260341 >seq19 Length=51387494 Score = 91.5 bits (100), Expect = 1e-13 Identities = 203/302 (67%), Gaps = 6/302 (2%) Strand=Plus/Plus Query 31766 GCGCTAGTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCT 31825 || || || |||| || ||||| || | | |||| ||| || ||| || ||||| Sbjct 45564265 GCTCTTGTGAAAATGGACATTCAGATAGCACTTTCTTCTCGGTATTATGGAAGAGTAGCT 45564324 Query 31826 CCTAGATCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCA 31885 || | ||||| ||||| | ||||||||| | || || || || ||||| | |||| | Sbjct 45564325 CCACGGTCTGGCTTGGCTGCAAAACACTTTGTAGATGTAGGAGCTGGTGTCACAGATGAA 45564384 Query 31886 GACTATAGAGGAAACGTTGGAATTGTGTTGTTTAATTTTGG---AGAAAAATCATACAGT 31942 || ||||||||||| |||| |||| | ||||||||||| |||||| | | || Sbjct 45564385 GATTATAGAGGAAATATTGGTGTTGTAGTCTTTAATTTTGGCAAAGAAAAGT-TTGAAG- 45564442 Query 31943 ATAAAAAAGGGCGATAGGGTAGCTCAACTAATTTGCGAAAAAATAGAAATGCCCCAAATA 32002 | ||| | | ||| | | || || || ||||| ||| || || ||||| Sbjct 45564443 -TCAAATAACGTGATCGAATTGCACAGCTCATTTGTGAACGGATGTTCTATCCAGAAATA 45564501 Query 32003 GAAGTAGCTAATTATCTAGATTGCACGAAAAGAGGCGCTAAAGGCTTTGGATCTACCGGA 32062 |||| || | | | | ||| ||| ||||| ||| | ||| ||||| ||||| ||| Sbjct 45564502 GAAGAAGTTCAAGCTTTGGATGACACCAAAAGGGGCTCAGGAGGTTTTGGTTCTACTGGA 45564561 Query 32063 AA 32064 || Sbjct 45564562 AA 45564563 >seq13 Length=104990034 Score = 91.5 bits (100), Expect = 1e-13 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 4809 GGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATA 4868 || |||| || |||||||| || || || |||||||||||||||||||| ||||| || Sbjct 9461213 GGATCTTTTATGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATG 9461154 Query 4869 GCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATC 4926 ||||| || || || || || || | |||||||| | |||||||| | | ||||| Sbjct 9461153 GCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATC 9461096 >seq8 Length=140346614 Score = 89.7 bits (98), Expect = 4e-13 Identities = 98/130 (75%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 4921 AAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAA 4980 |||||||| || || ||||| ||||| || || ||||||||||||||||| || || | Sbjct 97941934 AAAATCTT---ACCAAATTTTCATTTACAATTCCATCACTGGCTGCAAAAAAGGCTAAGA 97941990 Query 4981 CATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAG 5040 ||||| || ||||||| || || | ||||| || |||||||| || | ||| || | Sbjct 97941991 TGTGAGAGATGAAGTACTTCTCATCTGCTTTAAGCTTGTTCCAGTGAGGGAGATCCTTTG 97942050 Query 5041 TTAAATCAAC 5050 ||| || || Sbjct 97942051 ATAAGTCGAC 97942060 Score = 86.0 bits (94), Expect = 5e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 4260 TGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCC 4319 || || || || ||||| || || |||||||| ||||| |||||||| ||||| |||||| Sbjct 97923167 TGATACTCCGAAACTCGTTTCTCAAAGAAATTTGTTTTTCCTTCTAAAGAAATGTTTTCC 97923226 Query 4320 ATAAAATCAAACGGATT 4336 ||||||||||| ||||| Sbjct 97923227 ATAAAATCAAAAGGATT 97923243 >seq2 Length=188283584 Score = 86.0 bits (94), Expect = 5e-12 Identities = 166/242 (69%), Gaps = 6/242 (2%) Strand=Plus/Plus Query 31771 AGTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCTAG 31830 ||| |||| | ||||| || || | ||||| |||| || || || | ||||| | Sbjct 44988438 AGTGAAAATGGGCATTCAGATAGCTCTTCCTTCTGGGTTTTATAGAAGAGTGGCTCCATG 44988497 Query 31831 ATCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTA 31890 ||||| ||||| | |||||||||||||| || || | ||||| ||||| ||| || Sbjct 44988498 GTCTGGCTTGGCTGCAAAACACTTTATCGATGTAGGAACTGGTGTCATAGACGAAGATTA 44988557 Query 31891 TAGAGGAAACGTTGGAATTGTGTTGTTTAATTTTGG---AGAAAAATCATACAGTATAAA 31947 ||||||| ||| | ||| ||||||||||||| |||||| | || ||| || Sbjct 44988558 CTGAGGAAATGTTAGTGCTGTACTGTTTAATTTTGGCAAAGAAAAGT-TTAAAGTCAGAA 44988616 Query 31948 AAAGGGCGATAGGGTAGCTCAACTAATTTGCGAAAAAATAGAAATGCCCCAAATAGAAGT 32007 ||| | ||| | | || || || ||||| ||| ||| | || ||||||||| Sbjct 44988617 AAA--GTGATCGCATTGCACAGCTCATTTGTGAATGAATTTTTAATCCAGAAATAGAAGA 44988674 Query 32008 AG 32009 || Sbjct 44988675 AG 44988676 Score = 86.0 bits (94), Expect = 5e-12 Identities = 173/253 (68%), Gaps = 8/253 (3%) Strand=Plus/Plus Query 34294 AAAGGAAACAGCAAAAAC---ATACAAATGGTTCAGTATATTTATAAAAACACATCTTCT 34350 |||| ||||| || ||| | ||||||||| || |||||||| ||| ||||| || | Sbjct 113750500 AAAGAAAACACAAAGAACGACAAACAAATGGTCCAATATATTTACAAATACACAAGTTAT 113750559 Query 34351 TACGGAGATCCTCTAATGTTGATGAAAAGCGCTAGAAGTAACTGCTGGGATAAAACCGCT 34410 | | ||| || || |||||||||||||||||| || || ||| |||| || Sbjct 113750560 CCTG---ACCCTATACTGCTGATGAAAAGCGCTAGAAATAGTTGTTGGTCTAAAGATGCA 113750616 Query 34411 GAGTACGGTCTTTACTCAGTATATCAAGGAGGAATACACTATCTaaaaaaaGGAGATAGT 34470 || ||||| || || || | |||||||| ||| || | || || |||| || || Sbjct 113750617 GAATACGGACTCTATTCCATCTATCAAGGGGGATTATTTGAGCTTAAGAAAGATGACAGA 113750676 Query 34471 GTGTTTGTAACAGTTACTAACAAAAACTTTTTAGCGATGGACTACAGAAGTGA-CTATTT 34529 | ||||| | || || || | |||| ||| |||||| | |||| | || ||| Sbjct 113750677 ATTTTTGTTTCTGTAACAAATGAGCACTTGATAGACATGGACCA-TGAAGCCAGCTTTTT 113750735 Query 34530 TGGAGCGTTTTTA 34542 || || |||||| Sbjct 113750736 CGGGGCCTTTTTA 113750748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426720488086922