Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq5 150 2e-31 seq16 116 3e-21 >seq5 Length=183742232 Score = 150 bits (166), Expect = 2e-31 Identities = 174/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || |||||||| ||||| ||| ||| ||||| ||||| ||||| || Sbjct 52769884 GCCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGA 52769943 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| ||||| | || || ||||| |||||||| |||||||| ||||| ||||| | || Sbjct 52769944 GAGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGG 52770003 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCA 41813 | | ||||||||| ||| |||| |||| ||| || | |||| || | ||| | Sbjct 52770004 GATACCCTCCTTGTCT-TGAATTTTGGCTTTGACGTTCTCAATGGTGTCACTGGGCTCGA 52770062 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||| | || || ||||| ||||| || ||||| || || ||||||||||| Sbjct 52770063 CCTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAAGATCTGCATGTT 52770114 >seq16 Length=74961506 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| || ||| ||||| ||||| ||||| || || ||||| | || || Sbjct 15840425 ACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCC 15840484 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || || || | ||| ||||| | ||||| || ||||| ||| | Sbjct 15840485 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGG 15840544 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 ||||| ||||| | ||||| || | ||||||||| | || || || || Sbjct 15840545 ATTTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTCTTG 15840604 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || ||||| ||||| ||||| |||||||| || Sbjct 15840605 CCGGTCAGGGTCTTCACGAAGATCTGCATTTT 15840636 Score = 109 bits (120), Expect = 5e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||||| ||||| || ||||||||| ||||| ||||| || || ||||| Sbjct 15839962 AGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGG 15840021 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||| || || || || | ||| ||||| | ||| | || || Sbjct 15840022 CCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCT 15840081 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 || ||| ||| || ||||| | ||||| || | |||||| |||| || Sbjct 15840082 TTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACTTCCAGGGTG 15840141 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || ||||| ||||| ||||| |||||||| Sbjct 15840142 ATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 15840179 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| || ||||||||| ||||| ||||| || || ||||| | || || Sbjct 15840199 ACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCC 15840258 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || || || | ||| ||||| | ||| | || || || ||| | Sbjct 15840259 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATCCTGG 15840318 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||||| | ||||| || | |||||| |||| || || || || Sbjct 15840319 ATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTG 15840378 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||| ||||| ||||| |||||||| Sbjct 15840379 CCGGTCAGGGTCTTCACGAAGATCTGCAT 15840407 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| || ||||||||| ||||| ||||| ||||| ||||| | || || Sbjct 15839743 ACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCC 15839802 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || || || | ||| ||||| | ||| | || || || || | Sbjct 15839803 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATCTTGG 15839862 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||||| | ||||| || | ||||||||| | || || || || Sbjct 15839863 ATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTCTTG 15839922 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||| ||||| || || |||||||| Sbjct 15839923 CCGGTCAGGGTCTTCACAAAGATCTGCAT 15839951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461938583360800