Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08] 61,535 sequences; 3,441,244,233 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq10472 547 5e-151 seq20754 471 3e-128 seq20727 452 3e-122 seq5641 417 6e-112 seq20726 331 7e-86 seq17816 147 2e-30 >seq10472 Length=202140232 Score = 547 bits (606), Expect = 5e-151 Identities = 461/566 (81%), Gaps = 0/566 (0%) Strand=Plus/Minus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || ||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct 39120093 AAAACACCTTCATATTAATCATTCTTCTCATATACTTCAAATTTGTACTTAATGCCTTTC 39120034 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || || || |||| ||| ||||||| ||| |||||| || |||||| |||||||| | | Sbjct 39120033 TCCTCCTGGACATCAGAGAGAACACCTGGGTATTCTGGCAGAAGTTTATATTTCTCCAAA 39119974 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 |||| ||||| |||||| ||||||| ||||||||| ||||||||||| |||||||| ||| Sbjct 39119973 TCAATTTCTGAAAAAAACGTGTCACTTTCAAAGTCCTGCATGATCCTTGTCACAAATAGT 39119914 Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194 ||||||| || | | | | |||| ||||| ||||| |||||||| || |||| |||||| Sbjct 39119913 TTAAGATGGCCTAGGTGATTCATGGCTTCCTTATAAACAGAACTGCCACCAACTATCCAA 39119854 Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254 | ||||||||||||||||||||||||||| |||| ||||||||||| |||||||| ||| Sbjct 39119853 ATCATGTCTACTTTATTTGCTAATTCTGGTCGTTCAGTAAGTTTTAAGGCATCATCCAAA 39119794 Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314 || | || | ||||||||||| |||||| | ||||| ||||| |||||||||| | | Sbjct 39119793 CTTCTGGCAAGAAAATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAA 39119734 Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCC 4374 |||||||| | |||||||| || |||||||||||||| |||||||| ||||| |||| Sbjct 39119733 TTAATTCTATCCTTTAAAGGTCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCGACCC 39119674 Query 4375 ATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGT 4434 |||||||| | |||||||||| | ||| ||||| || || |||||||| ||||||| Sbjct 39119673 ATAATCACCAGATTCTGTTTACCCTCTACTGAAGAAGTTGTGGTCATTCTCTGGAAATAC 39119614 Query 4435 TTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTT 4494 | || |||||| | || ||||| |||| || || | ||||| |||||||||||| Sbjct 39119613 CTGAATTCATTCCTGAGCGGCGGCCAGGGCAGGTCCCCGTTCTTGCCGATGCCCATGTTT 39119554 Query 4495 TGAGCTACAGCAACAATGCAGTTTAG 4520 || | ||||| || ||||||||||| Sbjct 39119553 TGGGACACAGCGACGATGCAGTTTAG 39119528 >seq20754 Length=29380 Score = 471 bits (522), Expect = 3e-128 Identities = 449/568 (79%), Gaps = 7/568 (1%) Strand=Plus/Minus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || ||||||| ||||||||||||||||||||||||||||||||| | ||| Sbjct 15323 AAAACACCTTCATATTAATCATTCTTCTCATATACTTCAAATTTGTACTTAATGCCTTTT 15264 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || || || |||| || ||||| | ||||||||| || |||||| |||||||| | | Sbjct 15263 TCCTCCTGGACATCTGAGAGAACCCCCGGATATTCTGGCAGAAGTTTATATTTCTCCAAA 15204 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 ||| |||||||||||| ||||||| |||||||||||||||||||| |||||||| ||| Sbjct 15203 TCAGTTTCTGGAAAAAATGTGTCACTTTCAAAGTCTTGCATGATCCCTGTCACAAATAGT 15144 Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194 ||||||| || ||| | | |||| ||||| ||||| |||||||| || |||| |||||| Sbjct 15143 TTAAGATGGCTTGGGTGATTCATGGCTTCCTTATAAACAGAACTGCCACCAACTATCCAA 15084 Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254 | ||||||||||||||||||||||||||| ||||| |||||||| || ||||| | | Sbjct 15083 ATCATGTCTACTTTATTTGCTAATTCTGGTTGTTCAGTAAGTTTAAAGATCTCATCCAGA 15024 Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314 || | || | ||||||||||| |||||| | ||||| ||||| |||||| || | | Sbjct 15023 CTTCTGGCAAGAAAATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGATTACTAAA 14964 Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCC 4374 |||||||| | |||||||| || ||| ||||||||| | ||||||| || | ||| | Sbjct 14963 TTAATTCTATCCTTTAAAGGTCGATTC-TCTCAGGAA-TCAGAACCAGGTTTCCCTACAC 14906 Query 4375 ATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGT 4434 |||||||| | |||||||||| || ||| ||||| | || ||| |||| ||||||| Sbjct 14905 ATAATCACCAGATTCTGTTTACCTTCTACTGAAGAGTTTGT-GTCGTTCTCTGGAAATAC 14847 Query 4435 TTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGT--TTGCCAATGCCCATGT 4492 ||| |||||| | || ||||| |||| || || ||| ||||||||||||| || Sbjct 14846 CTAAGTTCATTCCTGAGCGGCGGCCAGGGCAGGT--CCCTGTTCTTGCCAATGCCCACGT 14789 Query 4493 TTTGAGCTACAGCAACAATGCAGTTTAG 4520 | || | ||||| || ||||||||||| Sbjct 14788 TCTGGGACACAGCGACGATGCAGTTTAG 14761 >seq20727 Length=1646321 Score = 452 bits (500), Expect = 3e-122 Identities = 442/566 (78%), Gaps = 3/566 (1%) Strand=Plus/Plus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || ||||||| ||||||||||| |||||| |||||||||||||| |||| Sbjct 805266 AAAACACCTTCATATTAATCATTCTTCTCATGTACTTCGAATTTGTACTTAATGACTTTC 805325 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || || || |||| ||| ||||||| ||| |||||| || |||| |||||||| | | Sbjct 805326 TCCTCCTGGACATCAGAGAGAACACCTGGGTATTCTGGCAGAAGTCA-TATTTCTCCAAA 805384 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 |||| |||||||||||| ||||||| ||||||||| ||||| ||||| |||||||| ||| Sbjct 805385 TCAATTTCTGGAAAAAACGTGTCACTTTCAAAGTCCTGCATAATCCTTGTCACAAATAGT 805444 Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194 ||||||| || ||| | | |||| ||||| ||||| |||||||| || |||| |||||| Sbjct 805445 TTAAGATGGCTTGGGTGATTCATGGCTTCCTTATAAACAGAACTGCCACCAACTATCCAA 805504 Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254 | |||||||||| ||||||||||||||| |||| ||||||||||| ||||| | | Sbjct 805505 ATCATGTCTACTCTATTTGCTAATTCTGATTGTTTAGTAAGTTTTAAGATCTCATCCAGA 805564 Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314 || || || | ||| ||||||| |||||| | ||||| ||||| |||||||||| | | Sbjct 805565 CTTTTGGCAAGAAAGTGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAA 805624 Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCC 4374 || ||||| | ||||||| | ||||||||||| | |||||| | ||||| ||| | Sbjct 805625 TTCATTCTATCCATTAAAGGTTGATTCTTCTCAGGCTTGGAGAACGAGGTCTTCCTACAC 805684 Query 4375 ATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGT 4434 |||| ||| | |||||||||| || ||| ||||| | || |||||||| ||||||| Sbjct 805685 ATAA-CACCAGATTCTGTTTACCTTCTACTGAAGAGTTTGT-GTCATTCTCTGGAAATAC 805742 Query 4435 TTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTT 4494 |||| |||||| | || |||| |||| || || | |||||| | |||||||| Sbjct 805743 CTAAATTCATTCCTGAGCGGCGGCCCGGGCAGGTCCCCGTTCTTGCCATTACCCATGTTC 805802 Query 4495 TGAGCTACAGCAACAATGCAGTTTAG 4520 || | ||||| || ||||||||||| Sbjct 805803 TGGGACACAGCGACGATGCAGTTTAG 805828 Score = 385 bits (426), Expect = 3e-102 Identities = 430/557 (77%), Gaps = 18/557 (3%) Strand=Plus/Minus Query 3976 TTCTTCTCATATACTTCAAA--TTTGTACTTAATACT-TTTCTCTTCTTGCACATTAGAA 4032 ||||| ||||||||||| || ||||| |||| | |||||||| | || | ||| Sbjct 770432 TTCTT-TCATATACTTCCAAATTTTGTCATTAAAGCCCTTTCTCTTTCCGAACTTCAGAG 770374 Query 4033 AG-AACACTTGGA-TATTCTATCAA--AAGTTTG-TATTTCTCTAGA-TCAAATTCTGG- 4085 | ||||| || |||| | ||| |||||| |||||||| | | |||| |||||| Sbjct 770373 GGGAACACCCGGGGTATTTTGGCAAGAAAGTTTTATATTTCTCCAAAATCAATTTCTGGG 770314 Query 4086 AAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCA 4145 |||||| ||||||| ||||||||| ||||||||||| ||||||||||||||||||| | Sbjct 770313 AAAAAACGTGTCACTTTCAAAGTCCTGCATGATCCTTGTCACAAACAGTTTAAGATGCCC 770254 Query 4146 TGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGACCATGTCTAC 4205 ||| | | |||| ||||| ||||| |||||||| || |||| |||||| | ||||||||| Sbjct 770253 TGGGTGATTCATGGCTTCCTTATAAACAGAACTGCCACCAACTATCCAAATCATGTCTAC 770194 Query 4206 TTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAA 4265 | |||||||||||||||| ||||| ||||||||||| |||||| | ||| || Sbjct 770193 TCTATTTGCTAATTCTGGTTGTTCAGTAAGTTTTAAGATATCATCCAGACTTCCGGCAGG 770134 Query 4266 AAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCC 4325 ||||||| ||| |||||| ||||||| ||||| |||||| ||| | ||||||||| | Sbjct 770133 AAAATGAACTCCTTGTGGAGGCTCCTTGAGTTCTCTGCTGAAAACTAAATTAATTCTATC 770074 Query 4326 TTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCCATAATCACTAA 4385 |||||||| || ||| ||||||||| | ||||||| ||||| ||| || |||||| | Sbjct 770073 CTTTAAAGGTCGATTC-TCTCAGGAA-TCAGAACCAGGTCTTCCTACACAAAATCACCAG 770016 Query 4386 ATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGTTTAAAATCATT 4445 ||||| |||| || ||| ||||| | || ||| |||| ||||||| |||| ||||| Sbjct 770015 ATTCTATTTACCTTCTACTGAAGAGTTTGT-GTCGTTCTCTGGAAATACCTAAATTCATT 769957 Query 4446 CATAAGTCTTGGCCAAGGCAAGTTACCTTGT--TTGCCAATGCCCATGTTTTGAGCTACA 4503 | | || ||||| |||| || || ||| ||||||||||||||||| || | ||| Sbjct 769956 CCTGAGCGGCGGCCAGGGCAGGT--CCCTGTTCTTGCCAATGCCCATGTTCTGGGACACA 769899 Query 4504 GCAACAATGCAGTTTAG 4520 || || ||||||||||| Sbjct 769898 GCGACGATGCAGTTTAG 769882 >seq5641 Length=113028656 Score = 417 bits (462), Expect = 6e-112 Identities = 413/531 (78%), Gaps = 6/531 (1%) Strand=Plus/Plus Query 3967 TATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACA 4026 ||||||| ||||||||||| ||||||||||||||||||||| | |||||| || || || Sbjct 27360066 TATTAATAATTCTTCTCATGTACTTCAAATTTGTACTTAATGCCTTTCTCCTCCTGGGCA 27360125 Query 4027 TTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGA 4086 | ||| | ||||| ||| |||||| || |||||| |||||||| | ||||| ||||||| Sbjct 27360126 TCAGAGAAAACACCTGGGTATTCTGGCAGAAGTTTATATTTCTCCAAATCAATTTCTGGA 27360185 Query 4087 AAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCAT 4146 ||||| ||||||| ||||||||| ||||||||||| ||| |||| |||||||||| || | Sbjct 27360186 AAAAACGTGTCACTTTCAAAGTCCTGCATGATCCTTGTCGCAAATAGTTTAAGATTGCTT 27360245 Query 4147 GGATAACTCATAGCTTCTTTAT-ACACAGAACTACCTCCAATTATCCAGACCATGTCTAC 4205 | | | |||| | ||| | || | | ||||||||| |||| |||||| | ||||||||| Sbjct 27360246 GAGTGATTCATGGATTCCTCATAAAATAGAACTACCACCAACTATCCAAATCATGTCTAC 27360305 Query 4206 TTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAA 4265 |||||||||||||||| | | | |||||||||| |||||||| | ||| | || | Sbjct 27360306 TTTATTTGCTAATTCTAGTTAT----TAAGTTTTAAGGCATCATCCAGACTTCTCGCAAG 27360361 Query 4266 AAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCC 4325 ||| ||||||| ||||| || | ||| || || | |||||||| ||||||||| Sbjct 27360362 AAATTGAGCTCCTTGTGG-AGGTTCTTGAGGTCTCTCCTGAGAACTGAATTAATTCTATT 27360420 Query 4326 TTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCCATAATCACTAA 4385 |||||||| || || ||||||||||| |||||||| |||| |||| | |||||| || Sbjct 27360421 CTTTAAAGGTCGATTATTCTCAGGAATGGAGAACCAGATCTTCCTACCTAAAATCACCAA 27360480 Query 4386 ATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGTTTAAAATCATT 4445 |||||| ||| || ||| || || || || |||||||| ||||||| | || ||| | Sbjct 27360481 ATTCTGCTTACCTTCTACTGAGGAAGTTGTGGTCATTCTCTGGAAATACCTGAATTCACT 27360540 Query 4446 CATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTTTG 4496 | | || |||||| |||| || || ||||| ||||||||||| || Sbjct 27360541 CCTGAGCGGTGGCCAGGGCAGGTCCCCACTCTTGCCGATGCCCATGTTCTG 27360591 >seq20726 Length=174210431 Score = 331 bits (366), Expect = 7e-86 Identities = 423/577 (73%), Gaps = 13/577 (2%) Strand=Plus/Plus Query 3963 TTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTG 4022 ||| ||||||| |||||| ||||||||||||||||||||||||| | |||||| || | Sbjct 62722720 TTTATATTAATCATTCTTTTCATATACTTCAAATTTGTACTTAACGCCTTTCTCCTCCTT 62722779 Query 4023 CACATTAGAAAGAACACTT---GGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAA 4079 ||||| ||| | ||| | | || |||||| | |||||| |||||||||| |||| Sbjct 62722780 CACATCAGAGACAACCCCTTGTGGGTATTCTGGGAGAAGTTTATATTTCTCTAAATCATC 62722839 Query 4080 TTCT---GGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTTT 4136 |||| |||||||| ||||||| || |||||| |||||||||| | |||||| ||||| Sbjct 62722840 TTCTAGGGGAAAAAAAGTGTCACTTTGAAAGTCCTGCATGATCCATGCCACAAATAGTTT 62722899 Query 4137 AAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGAC 4196 || | | | ||| |||| | ||| ||||| |||||||| ||||| | | | | | Sbjct 62722900 AAAGTGGTCTCT-TAATTCATGGATTCCTTATAAACAGAACTGCCTCCCACTGTAAAAAA 62722958 Query 4197 CATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACT 4256 |||||||| |||||||||||||| | | || || || ||||||| |||||| | | ||| Sbjct 62722959 CATGTCTAGTTTATTTGCTAATTTTAGTTGCTCAATACGTTTTAAGGCATCACCCAGACT 62723018 Query 4257 CTTAGCTAA-AAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACAT 4315 ||||| || |||| || ||| ||||| | ||||| ||| | |||| ||| | || Sbjct 62723019 -TTAGCCAAGAAAAGGAAGTCTTTGTGGTGGTTCCTTGGATTCTCTACTGACAACTAAAT 62723077 Query 4316 TAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCCA 4375 ||||| | |||||||| | |||||||||| ||| |||||| | | ||| || || Sbjct 62723078 TAATTATATTCTTTAAAGGTTGATTCTTCTCAGTAATCGAGAACAAGGACTTCCTAATCA 62723137 Query 4376 TAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGTT 4435 || ||||||||| |||||| || | | ||||| | || |||||||||||||| | Sbjct 62723138 AAAACACTAAATTTTGTTTACCTTCTGCTGAAGAGGGTGTGGTCATTCTTTGGAA----T 62723193 Query 4436 TAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTTT 4495 | || | ||| | || || || ||| || || | || |||||||| || | Sbjct 62723194 TGAATTTATTTCTGAGCTGGGGTCAGAGCAGGTCCCCATTCCTGTTGATGCCCATCTTCT 62723253 Query 4496 GAGCTACAGCAACAATGCAGTTTAGTGCTTGAACCAT 4532 | | |||| |||||||||||||||| |||||||| Sbjct 62723254 GGGAAACAGTGACAATGCAGTTTAGTGGATGAACCAT 62723290 Score = 302 bits (334), Expect = 3e-77 Identities = 232/274 (85%), Gaps = 1/274 (0%) Strand=Plus/Plus Query 3967 TATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACA 4026 ||||||| ||| ||||||||||||||||||||||||||||| | |||||| || || ||| Sbjct 56876279 TATTAATCATTTTTCTCATATACTTCAAATTTGTACTTAATGCCTTTCTCCTCCTGGACA 56876338 Query 4027 TTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGA 4086 | ||| ||||||| ||| |||||| || |||||| |||||||| | ||||| ||||||| Sbjct 56876339 TCAGAGAGAACACCTGGGTATTCTGGCAGAAGTTTATATTTCTCCAAATCAATTTCTGGA 56876398 Query 4087 AAAA-AGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCA 4145 |||| | ||||||| ||||||||| ||||||||||| |||||||| |||||||||| || Sbjct 56876399 AAAATACGTGTCACTTTCAAAGTCCTGCATGATCCTTGTCACAAATAGTTTAAGATGGCC 56876458 Query 4146 TGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGACCATGTCTAC 4205 ||| | | |||| | ||| ||||| |||||||| || |||| |||||| | ||| ||||| Sbjct 56876459 TGGGTGATTCATGGATTCCTTATAAACAGAACTGCCACCAACTATCCAAATCATCTCTAC 56876518 Query 4206 TTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTT 4239 |||||||||||||||||| ||||| | ||||||| Sbjct 56876519 TTTATTTGCTAATTCTGGTTGTTCAGCAAGTTTT 56876552 Score = 297 bits (328), Expect = 1e-75 Identities = 231/274 (84%), Gaps = 1/274 (0%) Strand=Plus/Plus Query 3967 TATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACA 4026 ||||||| ||| ||||||||||||||||||||||||||||| | |||||| || || ||| Sbjct 56870399 TATTAATCATTTTTCTCATATACTTCAAATTTGTACTTAATGCCTTTCTCCTCCTGGACA 56870458 Query 4027 TTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGA 4086 | ||| ||||||| ||| |||||| || |||||| |||||||| | ||||| ||||||| Sbjct 56870459 TCAGAGAGAACACCTGGGTATTCTGGCAGAAGTTTATATTTCTCCAAATCAATTTCTGGA 56870518 Query 4087 AAAA-AGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCA 4145 |||| | ||||||| ||||||||| ||||||||||| |||||||| ||||||||| || Sbjct 56870519 AAAACACGTGTCACTTTCAAAGTCCTGCATGATCCTTGTCACAAATAGTTTAAGACGGCC 56870578 Query 4146 TGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGACCATGTCTAC 4205 ||| | | |||| | ||| ||||| |||||||| || |||| |||||| | ||| ||||| Sbjct 56870579 TGGGTGATTCATGGATTCCTTATAAACAGAACTGCCACCAACTATCCAAATCATCTCTAC 56870638 Query 4206 TTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTT 4239 |||||||||||||||||| ||||| | ||||||| Sbjct 56870639 TTTATTTGCTAATTCTGGTTGTTCAGCAAGTTTT 56870672 Score = 203 bits (224), Expect = 2e-47 Identities = 190/242 (79%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 26931 AGCTTTTAGTCTACATTGTGAACAATGGGAGTAACGCATGTGCAGCCTACAGTCACTAGC 26990 |||| |||| | |||| ||| ||||| || || || || ||||||||||| | ||| || Sbjct 52540198 AGCTCTTAGGCCACATGGTGGACAATCGGGGTGACACAGGTGCAGCCTACGGACACCAGT 52540139 Query 26991 ATCTTCTCTAGCCTAAATGAATTAGGGCAGGGTTGATGCCCTTTGCGCACCACTAGAATC 27050 |||||||| |||| || || || |||||| | || | | |||||| || || ||| Sbjct 52540138 ATCTTCTCCAGCCGGAAGGAGTTGGGGCAGTGCGGAGGTTCCCTGCGCAGGACCAGGATC 52540079 Query 27051 TCTTGTTGGATAGGGACTGAGTTCATGTGGTAGTCTACATTCCCATCAGCATTAACACAT 27110 ||||| ||||| ||||| ||||||||||||||||| || || |||||||| || || || Sbjct 52540078 TCTTGCTGGATGGGGACAGAGTTCATGTGGTAGTCCACGTTTCCATCAGCGTTGACGCAG 52540019 Query 27111 CCTAAGTAGCGACACTTTGCTTCCCAAATCACAGAGGGATATCTATCTTGATCTTCATTG 27170 || |||| ||| |||||||| ||||| ||||||||||||||||| || | || |||||| Sbjct 52540018 CCCAAGTGGCGGCACTTTGCCTCCCAGATCACAGAGGGATATCTCTCAGGGTCCTCATTG 52539959 Query 27171 CG 27172 || Sbjct 52539958 CG 52539957 Score = 102 bits (112), Expect = 6e-17 Identities = 141/197 (72%), Gaps = 9/197 (5%) Strand=Plus/Minus Query 27174 TGGAGAGTCCAAGGAGACGTAGATCTATTGTAGTAGTCTGAAGCCCTTTTAGAACTAGTA 27233 |||||| |||||||||| || |||| |||||||| ||||| | |||||| | | | ||| Sbjct 52538705 TGGAGATTCCAAGGAGAGGTGGATCGGTTGTAGTAATCTGAGGACCTTTTGGGATTGGTA 52538646 Query 27234 TT------CCAGTTACGGATGCTCAAAGTAACCATCACAGACCGTGGAAAGCTATTGTTA 27287 || || |||| ||||| ||| | |||||||||| ||| || ||| | |||| Sbjct 52538645 TTGGTATTCCGGTTATGGATGTTCAGGTTGACCATCACAGTCCGGGGGAAGTTCTTGTCC 52538586 Query 27288 GCAGC---TAAGCATCTTGGGGTTTGTGCGCTTGTTATTTCTGACTTTACTATACAATCT 27344 ||| | ||||| ||| || ||| | ||| |||| ||| ||| ||||| || Sbjct 52538585 TCAGAATTTGGGCATCCTGGATTTCGTGGGATTGCTATTCCTGCCTTCACTATGGCCTCC 52538526 Query 27345 ATGCTCAGCAGCAGAAG 27361 | |||||||||||| || Sbjct 52538525 AGGCTCAGCAGCAGTAG 52538509 >seq17816 Length=183952662 Score = 147 bits (162), Expect = 2e-30 Identities = 108/126 (86%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 4165 TTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGCTAATTCTGGC 4224 ||||| |||||||| || |||| |||||||||||||||||||||||||||||||||||| Sbjct 80828006 TTATAAACAGAACTGCCACCAACTATCCAGACCATGTCTACTTTATTTGCTAATTCTGGT 80828065 Query 4225 TGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTCTATGTGGA 4284 ||||| ||||||||||| |||||||||| ||| | | | ||||||||||| |||||| Sbjct 80828066 TGTTCAGTAAGTTTTAAGGCATCATCTAGACTTCTGGAAAGAAAATGAGCTCCTTGTGGA 80828125 Query 4285 AGCTCC 4290 | ||| Sbjct 80828126 GGTTCC 80828131 Score = 127 bits (140), Expect = 1e-24 Identities = 110/135 (81%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 4057 AGTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATG 4116 ||||| |||||||| | ||||| |||||||||||| ||||||| ||||||||| |||||| Sbjct 80823975 AGTTTATATTTCTCCAAATCAATTTCTGGAAAAAATGTGTCACTTTCAAAGTCCTGCATG 80824034 Query 4117 ATCCTAGTCACAAACAGTTTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAA 4176 ||||| |||||||| |||||||||| || ||| | | |||| ||||| || | | | || Sbjct 80824035 ATCCTTGTCACAAATAGTTTAAGATGGCCTGGGTGATTCATGGCTTCCTTTGAAATAAAA 80824094 Query 4177 CTACCTCCAATTATC 4191 | || | ||||| || Sbjct 80824095 CAACAT-CAATTTTC 80824108 Score = 125 bits (138), Expect = 5e-24 Identities = 93/109 (85%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349 ||| ||||| |||||||||| | ||||||||| | |||||||| || ||||||||||| Sbjct 80839824 CTTGAGTTCTCTGCTGAGAACTAAATTAATTCTATCCTTTAAAGGTCGATTCTTCTCAGG 80839883 Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCT 4398 ||| |||||||| ||||| |||||||||||||| | |||||||||| || Sbjct 80839884 AATGGAGAACCAGGTCTTCTTACCCATAATCACCAGATTCTGTTTACCT 80839932 Score = 105 bits (116), Expect = 5e-18 Identities = 79/93 (85%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || ||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct 80818728 AAAACACCTTCATATTAATCATTCTTCTCATATACTTCAAATTTGTACTTAATGCCTTTC 80818787 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATAT 4047 || || || |||| ||| ||||||| ||| ||| Sbjct 80818788 TCCTCCTGGACATCAGAGAGAACACCTGGGTAT 80818820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360980276840285