Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08]
61,535 sequences; 3,441,244,233 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq10472 203 4e-47
seq1 163 3e-35
seq46691 159 4e-34
seq47930 123 3e-23
>seq10472
Length=202140232
Score = 203 bits (224), Expect = 4e-47
Identities = 569/865 (66%), Gaps = 19/865 (2%)
Strand=Plus/Minus
Query 176394 TTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACT 176453
||||||||| | | |||||||| || |||||| ||||| || | || || | ||
Sbjct 100293386 TTGGGCAATGTGGTGGTGGTGATGATCCTCATAAAATACAGGAGGCTCCGAATTATGACC 100293327
Query 176454 AACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTT 176513
||||| | ||| | ||| |||| || || ||| | || || || || || | || ||
Sbjct 100293326 AACATCTACCTGCTCAACCTGGCCATTTCGGACCTACTCTTCCTCTTCACCCTTCCGTTC 100293267
Query 176514 TGGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTG 176573
||||| |||||| | | | | ||| | ||| ||| || | | ||||||| ||
Sbjct 100293266 TGGATCCACTATGTCAGG--GGA-CATAACTGGGTTTTCGGCCATGGCATGTGTAAGCTC 100293210
Query 176574 CTC--AGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAA 176631
||| |||| | | | ||| | |||||||| || |||||| ||| |||||||| |
Sbjct 100293209 CTCTCAGGGTTTTATCACACAGGCT--TGTACAGCGAGATCTTTTTCATAATCCTGCTGA 100293152
Query 176632 CAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAACAGTAA 176691
| | |||||||| || || ||||| | || || ||| | | | || || |
Sbjct 100293151 CGATCGACAGGTACCTGGCCATTGTCCACGCGGTGTTTGCCCTTCGAACCCGGACTGTCA 100293092
Query 176692 CCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTG 176751
| | ||| | | ||| | | |||||| ||||||| | | | || ||||
Sbjct 100293091 CTTTTGGTGTCATCACCAGCATCGTCACCTGGGGCCTGGCAGTGCTAGCAGCTCTTCCTG 100293032
Query 176752 AATTTTTCTTTCATGGACACCAAGATGACAATGGTAGGGT-TCAGTGTGATCCTTACTAC 176810
||||| |||| ||| |||| | | | || | | || | || |||
Sbjct 100293031 AATTTATCTTCTATGAGATTGAAGA-GTTGTTTGAAGAGACTTTTTGCAGTGCTGTTTAC 100292973
Query 176811 CCAGAGATGTCTACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGT 176870
|||||| | | || ||||||| |||| | | ||| || || ||
Sbjct 100292972 CCAGAGGATACAGTATATAGCTGGAGGCATTTCCACACTCTGAGAATGACCATCTTCTGT 100292913
Query 176871 CTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTG 176930
|| || | ||||||||| ||||||| |||||||| | ||| |||| || ||| ||
Sbjct 100292912 CTTGTTCTCCCTCTGCTCGTTATGGCCATCTGCTACACAGGAATCATCAAAACGCTGCTG 100292853
Query 176931 AGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCC 176990
||| ||||||| || || ||||||||||||||| ||||||| ||||||||||||| ||
Sbjct 100292852 AGGTGCCCCAGTAAAAAAAAGTACAAGGCCATCCGGCTCATTTTTGTCATCATGGCGGTG 100292793
Query 176991 TATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACC 177050
| ||| |||| |||||||||||||| | | | |||| || ||| ||| ||| | |
Sbjct 100292792 TTTTTCATTTTCTGGACACCCTACAATGTGGCTATCCTTCTCTCTTCCTATCA----ATC 100292737
Query 177051 CTTCTTA-----ACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAA 177105
| ||||| | || | |||| ||||| | ||||| ||| ||||| | |
Sbjct 100292736 CATCTTATTTGGAAATG-ACTGTGAGCGGAGCAAGCATCTGGACCTGGTCTTGCTGGTGA 100292678
Query 177106 CAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGG 177165
|| | | |||||| | ||||| ||| | ||||| ||||||||||| || || || |
Sbjct 100292677 CAGAGGTGATCGCCTACTCCCACTGCTGCGTGAACCCGGTGATCTACGCCTTTGTTGGAG 100292618
Query 177166 AGAAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCA 177225
||| ||| | | ||||| |||||||||||||| || || ||| |||| |||
Sbjct 100292617 AGAGGTTCCGGAAGTACCTGCGCCACTTCTTCCACAGGCACATGTTCATGCACCTGGGCA 100292558
Query 177226 AGTACATCCCCTTCCTGTCTGGTGA 177250
|||||||| ||||| || ||||
Sbjct 100292557 GATACATCCCATTCCTTCCTAGTGA 100292533
Score = 203 bits (224), Expect = 4e-47
Identities = 569/865 (66%), Gaps = 19/865 (2%)
Strand=Plus/Minus
Query 9508 TTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACT 9567
||||||||| | | |||||||| || |||||| ||||| || | || || | ||
Sbjct 100293386 TTGGGCAATGTGGTGGTGGTGATGATCCTCATAAAATACAGGAGGCTCCGAATTATGACC 100293327
Query 9568 AACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTT 9627
||||| | ||| | ||| |||| || || ||| | || || || || || | || ||
Sbjct 100293326 AACATCTACCTGCTCAACCTGGCCATTTCGGACCTACTCTTCCTCTTCACCCTTCCGTTC 100293267
Query 9628 TGGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTG 9687
||||| |||||| | | | | ||| | ||| ||| || | | ||||||| ||
Sbjct 100293266 TGGATCCACTATGTCAGG--GGA-CATAACTGGGTTTTCGGCCATGGCATGTGTAAGCTC 100293210
Query 9688 CTC--AGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAA 9745
||| |||| | | | ||| | |||||||| || |||||| ||| |||||||| |
Sbjct 100293209 CTCTCAGGGTTTTATCACACAGGCT--TGTACAGCGAGATCTTTTTCATAATCCTGCTGA 100293152
Query 9746 CAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAACAGTAA 9805
| | |||||||| || || ||||| | || || ||| | | | || || |
Sbjct 100293151 CGATCGACAGGTACCTGGCCATTGTCCACGCGGTGTTTGCCCTTCGAACCCGGACTGTCA 100293092
Query 9806 CCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTG 9865
| | ||| | | ||| | | |||||| ||||||| | | | || ||||
Sbjct 100293091 CTTTTGGTGTCATCACCAGCATCGTCACCTGGGGCCTGGCAGTGCTAGCAGCTCTTCCTG 100293032
Query 9866 AATTTTTCTTTCATGGACACCAAGATGACAATGGTAGGGT-TCAGTGTGATCCTTACTAC 9924
||||| |||| ||| |||| | | | || | | || | || |||
Sbjct 100293031 AATTTATCTTCTATGAGATTGAAGA-GTTGTTTGAAGAGACTTTTTGCAGTGCTGTTTAC 100292973
Query 9925 CCAGAGATGTCTACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGT 9984
|||||| | | || ||||||| |||| | | ||| || || ||
Sbjct 100292972 CCAGAGGATACAGTATATAGCTGGAGGCATTTCCACACTCTGAGAATGACCATCTTCTGT 100292913
Query 9985 CTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTG 10044
|| || | ||||||||| ||||||| |||||||| | ||| |||| || ||| ||
Sbjct 100292912 CTTGTTCTCCCTCTGCTCGTTATGGCCATCTGCTACACAGGAATCATCAAAACGCTGCTG 100292853
Query 10045 AGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCC 10104
||| ||||||| || || ||||||||||||||| ||||||| ||||||||||||| ||
Sbjct 100292852 AGGTGCCCCAGTAAAAAAAAGTACAAGGCCATCCGGCTCATTTTTGTCATCATGGCGGTG 100292793
Query 10105 TATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACC 10164
| ||| |||| |||||||||||||| | | | |||| || ||| ||| ||| | |
Sbjct 100292792 TTTTTCATTTTCTGGACACCCTACAATGTGGCTATCCTTCTCTCTTCCTATCA----ATC 100292737
Query 10165 CTTCTTA-----ACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAA 10219
| ||||| | || | |||| ||||| | ||||| ||| ||||| | |
Sbjct 100292736 CATCTTATTTGGAAATG-ACTGTGAGCGGAGCAAGCATCTGGACCTGGTCTTGCTGGTGA 100292678
Query 10220 CAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGG 10279
|| | | |||||| | ||||| ||| | ||||| ||||||||||| || || || |
Sbjct 100292677 CAGAGGTGATCGCCTACTCCCACTGCTGCGTGAACCCGGTGATCTACGCCTTTGTTGGAG 100292618
Query 10280 AGAAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCA 10339
||| ||| | | ||||| |||||||||||||| || || ||| |||| |||
Sbjct 100292617 AGAGGTTCCGGAAGTACCTGCGCCACTTCTTCCACAGGCACATGTTCATGCACCTGGGCA 100292558
Query 10340 AGTACATCCCCTTCCTGTCTGGTGA 10364
|||||||| ||||| || ||||
Sbjct 100292557 GATACATCCCATTCCTTCCTAGTGA 100292533
>seq1
Length=229942017
Score = 163 bits (180), Expect = 3e-35
Identities = 134/159 (84%), Gaps = 7/159 (4%)
Strand=Plus/Minus
Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141
||||||| |||| ||| | ||||||| || || || ||||||||||||||||| | |||
Sbjct 43407826 CAGCGCCGCAGCGTCAGCATGAGGGTCTTCAGGTTCTCCCCCAGGGAGTTCACATGCTCC 43407767
Query 138142 TT--TTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACT 138199
|| | |||| || || |||||||| || ||||||||||||||||||||||||||||
Sbjct 43407766 TTGATGTCTGG---GT-CT-TGGTTCTCAGCTTGGGGCATCACCTCCTCCAGGTAAAACT 43407712
Query 138200 GGATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238
||||||||||||||| ||| ||||| |||||||||||||
Sbjct 43407711 GGATCATCTCAGACAAGGCTTGGCAACCCAGGTAACCCT 43407673
Score = 114 bits (126), Expect = 2e-20
Identities = 83/96 (86%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 137921 CTCAGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACT 137980
|||||||| ||||| | ||||||||||| ||||||||||| ||||||||||||||||
Sbjct 43410286 CTCAGTTTCGTATCTTCATTGTCATGTAGGCTTCTATGTAGTTGATGAAGATGTCAAACT 43410227
Query 137981 CGCTCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016
|||||||||| ||||||| ||||| || |||||||
Sbjct 43410226 CGCTCATGGCTTTGTAGATGCCTTTCTCTTGGAGCT 43410191
>seq46691
Length=94050890
Score = 159 bits (176), Expect = 4e-34
Identities = 132/161 (82%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809
|||||||||| ||| || | |||||| || ||||||| ||||||||| |||||||| |||
Sbjct 32059108 AGGCCCGTGATGTGCGCAATCATGTACGTGAGCAGGGCGTAGCTGGCGATGTTGAAAGGC 32059167
Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869
|| || || |||||||| ||||| | |||||||||||||||||| ||||| | | | ||
Sbjct 32059168 ACACCTAGGCCCATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACC 32059227
Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910
|| ||||||||||| ||| ||||| || ||||| |||||
Sbjct 32059228 ACATAGAACTGGCAGAGGGCATGGCATGGAGGCAGCGCCAT 32059268
>seq47930
Length=60714840
Score = 123 bits (136), Expect = 3e-23
Identities = 217/307 (71%), Gaps = 12/307 (4%)
Strand=Plus/Plus
Query 145582 TCCAGCGCAAAGTCCTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTG 145641
|||| | |||||| ||||| |||| ||||| | ||| || | ||||| ||
Sbjct 36491638 TCCACCTGAAAGTCTTCCGCT-TGAAATCATCACTTGTCTCAACTTTCTGAAGGATTTTG 36491696
Query 145642 AGCCT-GGGAAAGGGCCGGGGGCTC-CTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGT 145699
||| | |||||||| | || ||| ||| ||||| | ||||| | | |||
Sbjct 36491697 AGCTTTGGGAAAGGTCTTGGTTCTCTCTGA--AGCTGAATTTTCAGTTTTGCAATGTGAC 36491754
Query 145700 TGAGGTAGACGTGCGCGTCCCCCA--GGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGT 145757
| ||||| || | | | || |||| | | ||| |||||| || |||| ||| ||||
Sbjct 36491755 TCAGGTAAACATACACATCTCCCAAAGTATGTGC--GAAGTCACCAGGCTTTAGGTCCGT 36491812
Query 145758 GAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGG-GCACCCCCA 145816
|| ||| | || || || || ||||||| |||||||| |||||||||| |||||| |
Sbjct 36491813 GATGTGTGTGATCACATAAGTGAGCAGGGCGTAGCTGGTGATGTTGAAGGTGCACCC--A 36491870
Query 145817 GCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGA 145876
| ||| |||| || || | ||||| |||||||||||| ||||| ||| | ||||| |||
Sbjct 36491871 GGCCCCTGTCTCCTGACCTCTGGTGCAGCTGGCAGGACAGCTCACCGTTCACCACGAAGA 36491930
Query 145877 ACTGGCA 145883
|||||||
Sbjct 36491931 ACTGGCA 36491937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589622920301400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |