Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08] 61,535 sequences; 3,441,244,233 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq37270 86.0 6e-12 >seq37270 Length=136387465 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 ||||| ||||| || ||||||||||| || |||| ||||| || ||||| || Sbjct 127298069 GTAGACTCTTTCTGGATGTTGTAATCAGACAGGGTGCGACCATCTTCCAGCTGTTTTCCG 127298128 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| |||||| | ||||| || ||||| ||||| || ||||| || ||| || Sbjct 127298129 GCAAAGATCAACCTCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTG 127298188 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | ||||| | || || || |||| ||| | |||||||| |||| || Sbjct 127298189 ACGTTCTCAATAGTGTCACTAGGCTCGACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTC 127298248 Query 143168 TTTACGAATATTTGCAT 143184 || ||||| || ||||| Sbjct 127298249 TTCACGAAGATCTGCAT 127298265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506624410861200