Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08]
61,535 sequences; 3,441,244,233 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq51122 150 3e-31
>seq51122
Length=156195299
Score = 150 bits (166), Expect = 3e-31
Identities = 383/577 (66%), Gaps = 7/577 (1%)
Strand=Plus/Minus
Query 124998 TTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057
|| |||||| ||| ||||| || ||| | ||||| || ||||| |||| ||||| |||
Sbjct 44960048 TTCCCCATCGAGTACCATGATATCTGGCAGATGTATAAGAAGGCGGAGGCTTCCTTCTGG 44959989
Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117
|| |||||||| || |||||||||||| | | ||||| | | | | ||
Sbjct 44959988 ACCACGGAAGAGGTGGACCTGTCCAAGGACATTCGGCACTGGGAATCCCTGAAGCCCGAG 44959929
Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177
||| |||| |||||||| || || ||| |||||||| | ||||| || ||
Sbjct 44959928 ---GAGAGAGATTTTATATCCCATGTTCTGGTTTTCTTTGCAGCAAGTGATGGCATAGTA 44959872
Query 125178 AACGACAATCTGTTGACACGATTCTCTCAAG-AGTTGACCATTCCAGAGGTGTCGTGCTT 125236
|| || ||| || || ||||| |||| |||| | ||| |||| | || ||
Sbjct 44959871 AATGAAAATTTGGTGGAGCGATTTAGTCAAATAGTTCAG-ATTACAGAAGCCCGCTGTTT 44959813
Query 125237 TTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGA 125296
|| || |||||||| || || ||| | || || |||||||| | || |||||
Sbjct 44959812 CTATGGCTTCCAAATTGCCATGGAAAACATACATTCTGAAATGTATAGTCTCCTTATTGA 44959753
Query 125297 CATGTACATTCGCGATCCGCAACGTAAACACATGC-TCTTTAACGCAATCGACACGGTGC 125355
|| ||||| ||||| ||| | || || |||| || || || || ||| |||
Sbjct 44959752 CACTTACATCAAAGATCC-CAAAGAAAGGGAATTTATCTTCAATGCCATTGAAACGATGC 44959694
Query 125356 CGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGT 125415
| | | | || ||||| | |||| | || ||||| | ||| | || || | |
Sbjct 44959693 CTTGTGTCAAGAAGAAGGCAGATTGGGCCTTGCGCTGGATTGGGGACAAAGAGGCTACCT 44959634
Query 125416 ACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTG 125475
| | || | | || || ||||| || ||||| ||| |||||||||| ||| |||||
Sbjct 44959633 ATGGTGAACGTGTTGTAGCCTTCGCTGCAGTAGAAGGCGTCTTCTTTTCCGGTTCTTTTG 44959574
Query 125476 CGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGT 125535
| | || || ||||||||||| || |||| ||||| || || ||| || ||
Sbjct 44959573 CATCGATATTCTGGCTCAAGAAACGAGGACCGATGCCTGGCCTCACGTTTTCCAATGAAC 44959514
Query 125536 TTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572
|||| |||| ||||| |||||||||| |||||
Sbjct 44959513 TTATTAGCAGAGATGAGGGTTTACACTGTGATTTTGC 44959477
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740489186526600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |