Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08] 61,535 sequences; 3,441,244,233 total letters Query= NC_004831.2 Length=43769 Score E Sequences producing significant alignments: (Bits) Value seq49093 86.0 2e-12 seq10472 86.0 2e-12 >seq49093 Length=62736349 Score = 86.0 bits (94), Expect = 2e-12 Identities = 47/47 (100%), Gaps = 0/47 (0%) Strand=Plus/Minus Query 39863 GAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 55625318 GAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 55625272 >seq10472 Length=202140232 Score = 86.0 bits (94), Expect = 2e-12 Identities = 50/52 (96%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 ||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct 5860820 CGTTAGAACGCGGCTGCAATTAATACATAACCTTATGTATGATACACATACG 5860871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139836942490770